Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA13	154664	hgsc.bcm.edu	37	7	48626761	48626761	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ABCA13	154664	hgsc.bcm.edu	37	7	48684267	48684267	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ABCC12	94160	hgsc.bcm.edu	37	16	48120652	48120652	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ADAM15	8751	hgsc.bcm.edu	37	1	155029456	155029456	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ADAM21	8747	hgsc.bcm.edu	37	14	70925557	70925557	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ADAMTS16	170690	hgsc.bcm.edu	37	5	5237123	5237123	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ADD3	120	hgsc.bcm.edu	37	10	111892129	111892129	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AFM	173	hgsc.bcm.edu	37	4	74353495	74353495	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AGGF1	55109	hgsc.bcm.edu	37	5	76330247	76330247	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AHNAK2	113146	hgsc.bcm.edu	37	14	105408571	105408571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AMY2B	280	hgsc.bcm.edu	37	1	104116926	104116926	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ANKRD55	79722	hgsc.bcm.edu	37	5	55412459	55412459	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AP4B1	10717	hgsc.bcm.edu	37	1	114437839	114437839	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
APLNR	187	hgsc.bcm.edu	37	11	57003436	57003436	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ARID3A	1820	hgsc.bcm.edu	37	19	966835	966835	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ARMC10	83787	hgsc.bcm.edu	37	7	102716234	102716234	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ASTN2	23245	hgsc.bcm.edu	37	9	119770419	119770419	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATP10B	23120	hgsc.bcm.edu	37	5	160049495	160049495	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATP13A2	23400	hgsc.bcm.edu	37	1	17316435	17316435	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATXN2	6311	hgsc.bcm.edu	37	12	111893938	111893938	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BDP1	55814	hgsc.bcm.edu	37	5	70837402	70837402	+	Silent	SNP	T	T	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C11orf41	25758	hgsc.bcm.edu	37	11	33565229	33565229	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C12orf35	55196	hgsc.bcm.edu	37	12	32137637	32137637	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C15orf2	23742	hgsc.bcm.edu	37	15	24923220	24923220	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C17orf68	80169	hgsc.bcm.edu	37	17	8141530	8141530	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C2orf65	130951	hgsc.bcm.edu	37	2	74842094	74842094	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CAGE1	285782	hgsc.bcm.edu	37	6	7378939	7378939	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CASP14	23581	hgsc.bcm.edu	37	19	15164633	15164633	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CASP4	837	hgsc.bcm.edu	37	11	104820329	104820329	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CBX4	8535	hgsc.bcm.edu	37	17	77808933	77808933	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCT8L2	150160	hgsc.bcm.edu	37	22	17073139	17073139	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CD200R1L	344807	hgsc.bcm.edu	37	3	112538738	112538738	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CD300C	10871	hgsc.bcm.edu	37	17	72539061	72539061	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDC20B	166979	hgsc.bcm.edu	37	5	54442585	54442585	+	Silent	SNP	T	T	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDH19	28513	hgsc.bcm.edu	37	18	64218440	64218440	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDR1	1038	hgsc.bcm.edu	37	X	139866307	139866307	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CECR2	27443	hgsc.bcm.edu	37	22	18016871	18016871	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CKAP2L	150468	hgsc.bcm.edu	37	2	113520091	113520091	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CLTA	1211	hgsc.bcm.edu	37	9	36197550	36197550	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
COG7	91949	hgsc.bcm.edu	37	16	23456471	23456471	+	Silent	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
COL16A1	1307	hgsc.bcm.edu	37	1	32140871	32140871	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
COL6A5	256076	hgsc.bcm.edu	37	3	130145235	130145235	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
COL6A5	256076	hgsc.bcm.edu	37	3	130159021	130159021	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CREB3L2	64764	hgsc.bcm.edu	37	7	137567295	137567295	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CSHL1	1444	hgsc.bcm.edu	37	17	61988148	61988148	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CSMD1	64478	hgsc.bcm.edu	37	8	3019762	3019762	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CSMD1	64478	hgsc.bcm.edu	37	8	3224668	3224668	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CTAGE5	4253	hgsc.bcm.edu	37	14	39782554	39782554	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CYP7B1	9420	hgsc.bcm.edu	37	8	65527706	65527706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CYYR1	116159	hgsc.bcm.edu	37	21	27938688	27938688	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DDX47	51202	hgsc.bcm.edu	37	12	12974984	12974984	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DMD	1756	hgsc.bcm.edu	37	X	31792215	31792215	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DNAH8	1769	hgsc.bcm.edu	37	6	38903469	38903469	+	Silent	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DNAJC30	84277	hgsc.bcm.edu	37	7	73097529	73097529	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DOCK4	9732	hgsc.bcm.edu	37	7	111474698	111474698	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DRAP1	10589	hgsc.bcm.edu	37	11	65688828	65688828	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DSC3	1825	hgsc.bcm.edu	37	18	28587079	28587079	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DSEL	92126	hgsc.bcm.edu	37	18	65181324	65181324	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ECE2	9718	hgsc.bcm.edu	37	3	184008940	184008940	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EIF4G1	1981	hgsc.bcm.edu	37	3	184045649	184045649	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EMID2	136227	hgsc.bcm.edu	37	7	101091004	101091004	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ENOX2	10495	hgsc.bcm.edu	37	X	129799725	129799725	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ENPP3	5169	hgsc.bcm.edu	37	6	132054776	132054776	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EP300	2033	hgsc.bcm.edu	37	22	41537063	41537063	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ESRRG	2104	hgsc.bcm.edu	37	1	216680498	216680498	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM135B	51059	hgsc.bcm.edu	37	8	139160829	139160829	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM135B	51059	hgsc.bcm.edu	37	8	139165024	139165024	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM196A	642938	hgsc.bcm.edu	37	10	128973644	128973644	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAR2	55711	hgsc.bcm.edu	37	12	29450127	29450127	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAT3	120114	hgsc.bcm.edu	37	11	92573742	92573742	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAT4	79633	hgsc.bcm.edu	37	4	126240531	126240531	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBN2	2201	hgsc.bcm.edu	37	5	127625573	127625573	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBXO30	84085	hgsc.bcm.edu	37	6	146121310	146121310	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FGR	2268	hgsc.bcm.edu	37	1	27939590	27939590	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FLII	2314	hgsc.bcm.edu	37	17	18155087	18155087	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FNDC1	84624	hgsc.bcm.edu	37	6	159621073	159621073	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FRMD4A	55691	hgsc.bcm.edu	37	10	13789762	13789762	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FZD3	7976	hgsc.bcm.edu	37	8	28420399	28420399	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GABPB1	2553	hgsc.bcm.edu	37	15	50578233	50578233	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GALNT5	11227	hgsc.bcm.edu	37	2	158152237	158152237	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GIMAP8	155038	hgsc.bcm.edu	37	7	150171146	150171146	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPR111	222611	hgsc.bcm.edu	37	6	47649900	47649900	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPR156	165829	hgsc.bcm.edu	37	3	119887137	119887137	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPR174	84636	hgsc.bcm.edu	37	X	78426708	78426708	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HAVCR1	26762	hgsc.bcm.edu	37	5	156479626	156479626	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HDC	3067	hgsc.bcm.edu	37	15	50544711	50544711	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HIST1H2BO	8348	hgsc.bcm.edu	37	6	27861469	27861469	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HIVEP2	3097	hgsc.bcm.edu	37	6	143095101	143095101	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HMGXB3	22993	hgsc.bcm.edu	37	5	149428220	149428220	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HRC	3270	hgsc.bcm.edu	37	19	49657301	49657301	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HTR5A	3361	hgsc.bcm.edu	37	7	154863176	154863176	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IL22RA1	58985	hgsc.bcm.edu	37	1	24454648	24454648	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IL27	246778	hgsc.bcm.edu	37	16	28511032	28511032	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IQGAP2	10788	hgsc.bcm.edu	37	5	75967644	75967644	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ITM2A	9452	hgsc.bcm.edu	37	X	78616943	78616943	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KCNH8	131096	hgsc.bcm.edu	37	3	19575025	19575025	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIAA1614	57710	hgsc.bcm.edu	37	1	180914625	180914625	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIF5A	3798	hgsc.bcm.edu	37	12	57962772	57962772	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KLHL14	57565	hgsc.bcm.edu	37	18	30257170	30257170	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KLHL4	56062	hgsc.bcm.edu	37	X	86880726	86880726	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KRT33A	3883	hgsc.bcm.edu	37	17	39503312	39503312	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KRT73	319101	hgsc.bcm.edu	37	12	53002032	53002032	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KRTAP10-9	386676	hgsc.bcm.edu	37	21	46047699	46047699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LAMB1	3912	hgsc.bcm.edu	37	7	107600937	107600937	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LAMB2	3913	hgsc.bcm.edu	37	3	49158776	49158776	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LANCL3	347404	hgsc.bcm.edu	37	X	37526672	37526672	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LARP4	113251	hgsc.bcm.edu	37	12	50829370	50829370	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LBP	3929	hgsc.bcm.edu	37	20	36989418	36989418	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LPAR6	10161	hgsc.bcm.edu	37	13	48985564	48985564	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LPGAT1	9926	hgsc.bcm.edu	37	1	211960974	211960974	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LPHN3	23284	hgsc.bcm.edu	37	4	62813953	62813953	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LPXN	9404	hgsc.bcm.edu	37	11	58318661	58318661	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LRP8	7804	hgsc.bcm.edu	37	1	53715125	53715125	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LRRC37B	114659	hgsc.bcm.edu	37	17	30377033	30377033	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LSM14B	149986	hgsc.bcm.edu	37	20	60705692	60705692	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LTBP2	4053	hgsc.bcm.edu	37	14	75019597	75019597	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAGEB6	158809	hgsc.bcm.edu	37	X	26212513	26212513	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAP2	4133	hgsc.bcm.edu	37	2	210594977	210594977	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MATN2	4147	hgsc.bcm.edu	37	8	99039994	99039994	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MCF2	4168	hgsc.bcm.edu	37	X	138697065	138697065	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MCF2L	23263	hgsc.bcm.edu	37	13	113743927	113743927	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MORC3	23515	hgsc.bcm.edu	37	21	37744823	37744823	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MRPS15	64960	hgsc.bcm.edu	37	1	36921911	36921911	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MSH4	4438	hgsc.bcm.edu	37	1	76365392	76365392	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MUC16	94025	hgsc.bcm.edu	37	19	9008255	9008255	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MUC16	94025	hgsc.bcm.edu	37	19	9060477	9060477	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MUC4	4585	hgsc.bcm.edu	37	3	195509347	195509394	+	In_Frame_Del	DEL	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	-	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYBPC3	4607	hgsc.bcm.edu	37	11	47369028	47369028	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYH4	4622	hgsc.bcm.edu	37	17	10363353	10363353	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYOM2	9172	hgsc.bcm.edu	37	8	2056620	2056620	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NAV3	89795	hgsc.bcm.edu	37	12	78400518	78400518	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NCAM2	4685	hgsc.bcm.edu	37	21	22707913	22707913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NEB	4703	hgsc.bcm.edu	37	2	152534455	152534455	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NLRP4	147945	hgsc.bcm.edu	37	19	56369308	56369308	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NPAS4	266743	hgsc.bcm.edu	37	11	66190644	66190644	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NRG1	3084	hgsc.bcm.edu	37	8	32585559	32585559	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NTM	50863	hgsc.bcm.edu	37	11	132184535	132184535	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NTRK3	4916	hgsc.bcm.edu	37	15	88522655	88522655	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OCA2	4948	hgsc.bcm.edu	37	15	28230287	28230287	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ODZ2	57451	hgsc.bcm.edu	37	5	167303106	167303106	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR10S1	219873	hgsc.bcm.edu	37	11	123847904	123847904	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR1C1	26188	hgsc.bcm.edu	37	1	247920984	247920984	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR2C3	81472	hgsc.bcm.edu	37	1	247695749	247695749	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR2W3	343171	hgsc.bcm.edu	37	1	248059399	248059399	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR2W5	441932	hgsc.bcm.edu	37	1	247655163	247655163	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR4D1	26689	hgsc.bcm.edu	37	17	56233444	56233445	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR5T1	390155	hgsc.bcm.edu	37	11	56043737	56043737	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR8K3	219473	hgsc.bcm.edu	37	11	56085793	56085793	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR8K5	219453	hgsc.bcm.edu	37	11	55927020	55927020	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PAPOLG	64895	hgsc.bcm.edu	37	2	61020764	61020764	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PAPOLG	64895	hgsc.bcm.edu	37	2	61020766	61020766	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PAX3	5077	hgsc.bcm.edu	37	2	223158448	223158448	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PAX8	7849	hgsc.bcm.edu	37	2	114004442	114004442	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCDH1	5097	hgsc.bcm.edu	37	5	141244188	141244188	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCDH20	64881	hgsc.bcm.edu	37	13	61985432	61985432	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCDHA6	56142	hgsc.bcm.edu	37	5	140208296	140208296	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCDHB2	56133	hgsc.bcm.edu	37	5	140475022	140475022	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCDHGB3	56102	hgsc.bcm.edu	37	5	140750160	140750160	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDCD11	22984	hgsc.bcm.edu	37	10	105165820	105165820	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDE2A	5138	hgsc.bcm.edu	37	11	72291652	72291652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PER3	8863	hgsc.bcm.edu	37	1	7848257	7848257	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PHGDH	26227	hgsc.bcm.edu	37	1	120269704	120269704	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PKP1	5317	hgsc.bcm.edu	37	1	201282474	201282474	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PLCXD1	55344	hgsc.bcm.edu	37	X	207367	207367	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PLXDC1	57125	hgsc.bcm.edu	37	17	37263726	37263726	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PPARGC1B	133522	hgsc.bcm.edu	37	5	149206326	149206326	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PPM1A	5494	hgsc.bcm.edu	37	14	60750047	60750047	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PPM1K	152926	hgsc.bcm.edu	37	4	89199638	89199638	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PRDM7	11105	hgsc.bcm.edu	37	16	90128854	90128854	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PRDM9	56979	hgsc.bcm.edu	37	5	23522810	23522810	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PRKCG	5582	hgsc.bcm.edu	37	19	54403578	54403578	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PROSC	11212	hgsc.bcm.edu	37	8	37635496	37635496	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PSG7	5676	hgsc.bcm.edu	37	19	43439556	43439556	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTEN	5728	hgsc.bcm.edu	37	10	89692934	89692934	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTOV1	53635	hgsc.bcm.edu	37	19	50363310	50363310	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTRF	284119	hgsc.bcm.edu	37	17	40557107	40557107	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PYGB	5834	hgsc.bcm.edu	37	20	25273199	25273199	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAB3GAP2	25782	hgsc.bcm.edu	37	1	220363455	220363455	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAB9A	9367	hgsc.bcm.edu	37	X	13726867	13726867	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAD21	5885	hgsc.bcm.edu	37	8	117861192	117861192	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAD21	5885	hgsc.bcm.edu	37	8	117861193	117861193	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAD23A	5886	hgsc.bcm.edu	37	19	13060094	13060094	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAD50	10111	hgsc.bcm.edu	37	5	131911583	131911583	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAE1	8480	hgsc.bcm.edu	37	20	55949780	55949780	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RALGAPB	57148	hgsc.bcm.edu	37	20	37191290	37191290	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RALYL	138046	hgsc.bcm.edu	37	8	85441688	85441688	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAPGEF6	51735	hgsc.bcm.edu	37	5	130791707	130791707	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RBBP6	5930	hgsc.bcm.edu	37	16	24581549	24581549	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RBFA	79863	hgsc.bcm.edu	37	18	77794644	77794644	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RCSD1	92241	hgsc.bcm.edu	37	1	167663487	167663487	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RCSD1	92241	hgsc.bcm.edu	37	1	167666424	167666424	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RCSD1	92241	hgsc.bcm.edu	37	1	167666425	167666425	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RELN	5649	hgsc.bcm.edu	37	7	103123411	103123411	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RELN	5649	hgsc.bcm.edu	37	7	103183241	103183241	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RIMS4	140730	hgsc.bcm.edu	37	20	43386329	43386329	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ROPN1L	83853	hgsc.bcm.edu	37	5	10461395	10461395	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RTTN	25914	hgsc.bcm.edu	37	18	67860582	67860582	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RYR1	6261	hgsc.bcm.edu	37	19	38995000	38995000	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SAGE1	55511	hgsc.bcm.edu	37	X	134989103	134989103	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SCFD1	23256	hgsc.bcm.edu	37	14	31122782	31122782	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SCUBE1	80274	hgsc.bcm.edu	37	22	43715948	43715948	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SELPLG	6404	hgsc.bcm.edu	37	12	109017190	109017190	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SERPINB11	89778	hgsc.bcm.edu	37	18	61379818	61379818	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SERPINB11	89778	hgsc.bcm.edu	37	18	61387274	61387274	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SERTAD3	29946	hgsc.bcm.edu	37	19	40947637	40947637	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SF3B2	10992	hgsc.bcm.edu	37	11	65826444	65826444	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SHANK2	22941	hgsc.bcm.edu	37	11	70319378	70319378	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SIRPB1	10326	hgsc.bcm.edu	37	20	1552640	1552640	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC17A8	246213	hgsc.bcm.edu	37	12	100795581	100795581	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC25A3	5250	hgsc.bcm.edu	37	12	98989568	98989569	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC35A2	7355	hgsc.bcm.edu	37	X	48763735	48763735	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC35E4	339665	hgsc.bcm.edu	37	22	31042853	31042853	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SMAD1	4086	hgsc.bcm.edu	37	4	146474959	146474959	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SMG1	23049	hgsc.bcm.edu	37	16	18853041	18853041	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SNX10	29887	hgsc.bcm.edu	37	7	26404703	26404703	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SPAG16	79582	hgsc.bcm.edu	37	2	214794710	214794710	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SPANXN4	441525	hgsc.bcm.edu	37	X	142122025	142122025	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SPATA3	130560	hgsc.bcm.edu	37	2	231865130	231865130	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SPTBN5	51332	hgsc.bcm.edu	37	15	42182313	42182313	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
STAB1	23166	hgsc.bcm.edu	37	3	52548464	52548464	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
STAG2	10735	hgsc.bcm.edu	37	X	123184055	123184055	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
STK11IP	114790	hgsc.bcm.edu	37	2	220473343	220473343	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SYTL2	54843	hgsc.bcm.edu	37	11	85436233	85436233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TALDO1	6888	hgsc.bcm.edu	37	11	763815	763815	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TAOK3	51347	hgsc.bcm.edu	37	12	118637016	118637016	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TBX18	9096	hgsc.bcm.edu	37	6	85447007	85447007	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TCOF1	6949	hgsc.bcm.edu	37	5	149759117	149759117	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TCP10L2	401285	hgsc.bcm.edu	37	6	167585711	167585711	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TEC	7006	hgsc.bcm.edu	37	4	48147195	48147195	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TEK	7010	hgsc.bcm.edu	37	9	27190585	27190585	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TEX101	83639	hgsc.bcm.edu	37	19	43920339	43920339	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
THAP5	168451	hgsc.bcm.edu	37	7	108204734	108204734	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
THEMIS	387357	hgsc.bcm.edu	37	6	128134640	128134640	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TLN2	83660	hgsc.bcm.edu	37	15	63092887	63092887	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TM7SF4	81501	hgsc.bcm.edu	37	8	105361247	105361247	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMEM27	57393	hgsc.bcm.edu	37	X	15657735	15657735	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TSHZ3	57616	hgsc.bcm.edu	37	19	31769648	31769648	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TTN	7273	hgsc.bcm.edu	37	2	179498592	179498592	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
UBAC2	337867	hgsc.bcm.edu	37	13	99992588	99992588	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
URGCP	55665	hgsc.bcm.edu	37	7	43916373	43916373	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VEZT	55591	hgsc.bcm.edu	37	12	95663885	95663885	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VPS13B	157680	hgsc.bcm.edu	37	8	100779103	100779103	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VPS13C	54832	hgsc.bcm.edu	37	15	62160895	62160895	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VPS13C	54832	hgsc.bcm.edu	37	15	62212407	62212407	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
WDR93	56964	hgsc.bcm.edu	37	15	90246274	90246274	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
XIRP2	129446	hgsc.bcm.edu	37	2	168115487	168115487	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
XPOT	11260	hgsc.bcm.edu	37	12	64815232	64815232	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZCCHC11	23318	hgsc.bcm.edu	37	1	52940782	52940782	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZMIZ1	57178	hgsc.bcm.edu	37	10	81064965	81064965	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF222	7673	hgsc.bcm.edu	37	19	44536593	44536593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF233	353355	hgsc.bcm.edu	37	19	44778796	44778796	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF285	26974	hgsc.bcm.edu	37	19	44891488	44891488	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF510	22869	hgsc.bcm.edu	37	9	99522564	99522564	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF518B	85460	hgsc.bcm.edu	37	4	10445233	10445233	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF676	163223	hgsc.bcm.edu	37	19	22363368	22363368	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF683	257101	hgsc.bcm.edu	37	1	26691325	26691325	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF700	90592	hgsc.bcm.edu	37	19	12060983	12060983	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF718	255403	hgsc.bcm.edu	37	4	154787	154787	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF804B	219578	hgsc.bcm.edu	37	7	88963135	88963135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF93	81931	hgsc.bcm.edu	37	19	20044450	20044450	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4698-01	TCGA-B0-4698-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
