Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADNP2	22850	hgsc.bcm.edu	37	18	77894041	77894041	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AHRR	57491	hgsc.bcm.edu	37	5	413518	413518	+	Silent	SNP	A	A	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ARHGAP17	55114	hgsc.bcm.edu	37	16	24960732	24960732	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ARVCF	421	hgsc.bcm.edu	37	22	19969473	19969473	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ATRNL1	26033	hgsc.bcm.edu	37	10	117075206	117075206	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BCL2L14	79370	hgsc.bcm.edu	37	12	12232325	12232325	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C1orf201	90529	hgsc.bcm.edu	37	1	24710488	24710488	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C6orf211	79624	hgsc.bcm.edu	37	6	151790069	151790069	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CBLL1	79872	hgsc.bcm.edu	37	7	107393906	107393906	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CCDC93	54520	hgsc.bcm.edu	37	2	118732771	118732771	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CCDC93	54520	hgsc.bcm.edu	37	2	118732797	118732797	+	Silent	SNP	G	G	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CHID1	66005	hgsc.bcm.edu	37	11	902972	902972	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CHMP1B	57132	hgsc.bcm.edu	37	18	11851688	11851688	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
COG7	91949	hgsc.bcm.edu	37	16	23417539	23417539	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CYBRD1	79901	hgsc.bcm.edu	37	2	172409900	172409900	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DHX40	79665	hgsc.bcm.edu	37	17	57656854	57656854	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNHD1	144132	hgsc.bcm.edu	37	11	6584780	6584780	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
E2F7	144455	hgsc.bcm.edu	37	12	77427723	77427723	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EP400	57634	hgsc.bcm.edu	37	12	132512584	132512584	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FSHB	2488	hgsc.bcm.edu	37	11	30253599	30253599	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GLI2	2736	hgsc.bcm.edu	37	2	121708840	121708840	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GPR133	283383	hgsc.bcm.edu	37	12	131488769	131488769	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GRIA1	2890	hgsc.bcm.edu	37	5	153149729	153149729	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IRS4	8471	hgsc.bcm.edu	37	X	107978624	107978624	+	Silent	SNP	G	G	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KDM5C	8242	hgsc.bcm.edu	37	X	53230752	53230752	+	Nonsense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LPL	4023	hgsc.bcm.edu	37	8	19819627	19819627	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRRC16A	55604	hgsc.bcm.edu	37	6	25538187	25538187	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PARD3	56288	hgsc.bcm.edu	37	10	34671492	34671492	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PARP4	143	hgsc.bcm.edu	37	13	25074499	25074499	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLAT	5327	hgsc.bcm.edu	37	8	42046557	42046557	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
POLQ	10721	hgsc.bcm.edu	37	3	121158955	121158955	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
POTED	317754	hgsc.bcm.edu	37	21	15013735	15013735	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PRPF40B	25766	hgsc.bcm.edu	37	12	50029153	50029153	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PTK7	5754	hgsc.bcm.edu	37	6	43109480	43109480	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RALGAPA2	57186	hgsc.bcm.edu	37	20	20486076	20486076	+	Silent	SNP	A	A	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RHBDL3	162494	hgsc.bcm.edu	37	17	30621399	30621399	+	Silent	SNP	T	T	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RNF17	56163	hgsc.bcm.edu	37	13	25367463	25367463	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ROD1	9991	hgsc.bcm.edu	37	9	114993689	114993689	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SAMD3	154075	hgsc.bcm.edu	37	6	130505739	130505739	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SIPA1L2	57568	hgsc.bcm.edu	37	1	232650234	232650234	+	Silent	SNP	T	T	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLC25A26	115286	hgsc.bcm.edu	37	3	66428112	66428112	+	Splice_Site	SNP	A	A	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLC25A4	291	hgsc.bcm.edu	37	4	186067039	186067039	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SRRD	402055	hgsc.bcm.edu	37	22	26884408	26884408	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TCP10	6953	hgsc.bcm.edu	37	6	167790053	167790053	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
THADA	63892	hgsc.bcm.edu	37	2	43735802	43735802	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B0-4718-01	TCGA-B0-4718-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TYW1B	441250	hgsc.bcm.edu	37	7	72178756	72178756	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
UBE4B	10277	hgsc.bcm.edu	37	1	10132258	10132258	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
USP34	9736	hgsc.bcm.edu	37	2	61441707	61441707	+	Silent	SNP	G	G	A	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
VWCE	220001	hgsc.bcm.edu	37	11	61053852	61053852	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
XRCC6BP1	91419	hgsc.bcm.edu	37	12	58347427	58347427	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZBBX	79740	hgsc.bcm.edu	37	3	166960361	166960361	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4718-01	TCGA-B0-4718-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
