Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AAGAB	79719	hgsc.bcm.edu	37	15	67524205	67524205	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ANK3	288	hgsc.bcm.edu	37	10	61830655	61830655	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATP8B3	148229	hgsc.bcm.edu	37	19	1792020	1792020	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
B3GNT6	192134	hgsc.bcm.edu	37	11	76750646	76750646	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C10orf76	79591	hgsc.bcm.edu	37	10	103789421	103789421	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C2orf89	129293	hgsc.bcm.edu	37	2	85066361	85066361	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCDC149	91050	hgsc.bcm.edu	37	4	24810062	24810062	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CD109	135228	hgsc.bcm.edu	37	6	74517952	74517952	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDH18	1016	hgsc.bcm.edu	37	5	19721516	19721516	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDH7	1005	hgsc.bcm.edu	37	18	63530053	63530053	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHD6	84181	hgsc.bcm.edu	37	20	40126106	40126106	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHRNA5	1138	hgsc.bcm.edu	37	15	78880661	78880661	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CNOT6L	246175	hgsc.bcm.edu	37	4	78652583	78652583	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DGKK	139189	hgsc.bcm.edu	37	X	50147057	50147057	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EIF2AK4	440275	hgsc.bcm.edu	37	15	40300255	40300255	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EPHB1	2047	hgsc.bcm.edu	37	3	134920412	134920412	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ERC2	26059	hgsc.bcm.edu	37	3	56330283	56330283	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ERCC4	2072	hgsc.bcm.edu	37	16	14020449	14020449	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EXOSC10	5394	hgsc.bcm.edu	37	1	11128077	11128077	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM54B	56181	hgsc.bcm.edu	37	1	26153147	26153147	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBXO39	162517	hgsc.bcm.edu	37	17	6684202	6684202	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FIG4	9896	hgsc.bcm.edu	37	6	110053850	110053850	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FRMPD4	9758	hgsc.bcm.edu	37	X	12712557	12712557	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GALNTL5	168391	hgsc.bcm.edu	37	7	151716757	151716757	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GON4L	54856	hgsc.bcm.edu	37	1	155726770	155726770	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GRHL2	79977	hgsc.bcm.edu	37	8	102631901	102631901	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GSTA2	2939	hgsc.bcm.edu	37	6	52622679	52622679	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GTF2IRD1	9569	hgsc.bcm.edu	37	7	73973274	73973274	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GTPBP2	54676	hgsc.bcm.edu	37	6	43592732	43592732	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IL17RC	84818	hgsc.bcm.edu	37	3	9965582	9965582	+	Missense_Mutation	SNP	G	G	A	rs75692599	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KEAP1	9817	hgsc.bcm.edu	37	19	10599946	10599946	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIAA0368	23392	hgsc.bcm.edu	37	9	114184459	114184459	+	Silent	SNP	A	A	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIT	3815	hgsc.bcm.edu	37	4	55602666	55602666	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LECT2	3950	hgsc.bcm.edu	37	5	135286975	135286975	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MED10	84246	hgsc.bcm.edu	37	5	6372701	6372701	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MFSD1	64747	hgsc.bcm.edu	37	3	158545109	158545109	+	Silent	SNP	A	A	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MICALL2	79778	hgsc.bcm.edu	37	7	1478560	1478560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MTO1	25821	hgsc.bcm.edu	37	6	74183287	74183287	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NDRG1	10397	hgsc.bcm.edu	37	8	134270635	134270635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NF1	4763	hgsc.bcm.edu	37	17	29662002	29662002	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NUP88	4927	hgsc.bcm.edu	37	17	5307457	5307457	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR10J5	127385	hgsc.bcm.edu	37	1	159505240	159505240	+	Silent	SNP	A	A	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
P2RX4	5025	hgsc.bcm.edu	37	12	121655012	121655012	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PBRM1	55193	hgsc.bcm.edu	37	3	52668807	52668807	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PKD2L2	27039	hgsc.bcm.edu	37	5	137257415	137257415	+	Silent	SNP	T	T	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
POTEF	728378	hgsc.bcm.edu	37	2	130832626	130832626	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PRKACA	5566	hgsc.bcm.edu	37	19	14204026	14204026	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PSMB11	122706	hgsc.bcm.edu	37	14	23511574	23511574	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTPRK	5796	hgsc.bcm.edu	37	6	128297859	128297859	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RBM23	55147	hgsc.bcm.edu	37	14	23371031	23371031	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SETDB2	83852	hgsc.bcm.edu	37	13	50055233	50055233	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC19A3	80704	hgsc.bcm.edu	37	2	228563604	228563604	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC26A5	375611	hgsc.bcm.edu	37	7	103018052	103018052	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC9A3	6550	hgsc.bcm.edu	37	5	482713	482713	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SPRED1	161742	hgsc.bcm.edu	37	15	38643311	38643311	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TAAR2	9287	hgsc.bcm.edu	37	6	132938953	132938953	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TNFAIP3	7128	hgsc.bcm.edu	37	6	138198313	138198313	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TTN	7273	hgsc.bcm.edu	37	2	179407928	179407928	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
UGT2A3	79799	hgsc.bcm.edu	37	4	69817431	69817431	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZCCHC17	51538	hgsc.bcm.edu	37	1	31811818	31811818	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZMYM2	7750	hgsc.bcm.edu	37	13	20637092	20637092	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4815-01	TCGA-B0-4815-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
