Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA1	19	hgsc.bcm.edu	37	9	107547874	107547874	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ABCD2	225	hgsc.bcm.edu	37	12	39979968	39979968	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AHI1	54806	hgsc.bcm.edu	37	6	135749840	135749840	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AKAP3	10566	hgsc.bcm.edu	37	12	4737861	4737861	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ANGPTL1	9068	hgsc.bcm.edu	37	1	178834359	178834359	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ANKRD44	91526	hgsc.bcm.edu	37	2	197872639	197872639	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CBL	867	hgsc.bcm.edu	37	11	119170255	119170255	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCDC129	223075	hgsc.bcm.edu	37	7	31614243	31614243	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDAN1	146059	hgsc.bcm.edu	37	15	43016731	43016731	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CELSR1	9620	hgsc.bcm.edu	37	22	46804935	46804935	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CEP350	9857	hgsc.bcm.edu	37	1	180063373	180063373	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DDX28	55794	hgsc.bcm.edu	37	16	68055657	68055657	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DNAJB9	4189	hgsc.bcm.edu	37	7	108212243	108212243	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DSG1	1828	hgsc.bcm.edu	37	18	28925994	28925994	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
F8	2157	hgsc.bcm.edu	37	X	154090095	154090095	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FANCB	2187	hgsc.bcm.edu	37	X	14882969	14882969	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FARP1	10160	hgsc.bcm.edu	37	13	99100498	99100498	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FCN1	2219	hgsc.bcm.edu	37	9	137803109	137803109	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FCN1	2219	hgsc.bcm.edu	37	9	137803110	137803110	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FOXI3	344167	hgsc.bcm.edu	37	2	88747746	88747746	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GAD2	2572	hgsc.bcm.edu	37	10	26562624	26562624	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IL18RAP	8807	hgsc.bcm.edu	37	2	103057836	103057836	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IMPG1	3617	hgsc.bcm.edu	37	6	76713633	76713633	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KRT72	140807	hgsc.bcm.edu	37	12	52980755	52980755	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAGEB18	286514	hgsc.bcm.edu	37	X	26157291	26157291	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAGEE1	57692	hgsc.bcm.edu	37	X	75649762	75649762	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAN2C1	4123	hgsc.bcm.edu	37	15	75651073	75651073	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAP3K12	7786	hgsc.bcm.edu	37	12	53877184	53877184	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MCOLN2	255231	hgsc.bcm.edu	37	1	85403560	85403560	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MSN	4478	hgsc.bcm.edu	37	X	64953049	64953049	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYO5B	4645	hgsc.bcm.edu	37	18	47488647	47488647	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR5AS1	219447	hgsc.bcm.edu	37	11	55798806	55798806	+	Silent	SNP	A	A	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PIK3CA	5290	hgsc.bcm.edu	37	3	178916943	178916943	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PLCL1	5334	hgsc.bcm.edu	37	2	198949285	198949285	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAD50	10111	hgsc.bcm.edu	37	5	131976489	131976489	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SHROOM4	57477	hgsc.bcm.edu	37	X	50376617	50376617	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
STARD9	57519	hgsc.bcm.edu	37	15	42986490	42986490	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SYT1	6857	hgsc.bcm.edu	37	12	79679685	79679685	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TACC2	10579	hgsc.bcm.edu	37	10	123843471	123843471	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TAS2R46	259292	hgsc.bcm.edu	37	12	11214633	11214633	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMEM222	84065	hgsc.bcm.edu	37	1	27660545	27660545	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TOPBP1	11073	hgsc.bcm.edu	37	3	133339115	133339115	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRPM6	140803	hgsc.bcm.edu	37	9	77442734	77442734	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRPM7	54822	hgsc.bcm.edu	37	15	50878671	50878671	+	Silent	SNP	A	A	C	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
WBSCR17	64409	hgsc.bcm.edu	37	7	70880913	70880914	+	Frame_Shift_Ins	INS	-	-	GA	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZC3HC1	51530	hgsc.bcm.edu	37	7	129663485	129663485	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF454	285676	hgsc.bcm.edu	37	5	178391958	178391958	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-4821-01	TCGA-B0-4821-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
