Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ALDH4A1	8659	hgsc.bcm.edu	37	1	19212058	19212058	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ASB15	142685	hgsc.bcm.edu	37	7	123257653	123257653	+	Nonsense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ATF6	22926	hgsc.bcm.edu	37	1	161762092	161762092	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BTBD18	643376	hgsc.bcm.edu	37	11	57518583	57518583	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CACNA1C	775	hgsc.bcm.edu	37	12	2786309	2786310	+	Frame_Shift_Del	DEL	GT	GT	-	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CCDC83	220047	hgsc.bcm.edu	37	11	85630410	85630410	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CTSW	1521	hgsc.bcm.edu	37	11	65650835	65650835	+	Silent	SNP	T	T	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DOCK7	85440	hgsc.bcm.edu	37	1	62954615	62954615	+	Missense_Mutation	SNP	A	A	G	rs114368946	unknown	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DPYSL4	10570	hgsc.bcm.edu	37	10	134013907	134013907	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FRZB	2487	hgsc.bcm.edu	37	2	183730988	183730988	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GPCPD1	56261	hgsc.bcm.edu	37	20	5559154	5559154	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GPR179	440435	hgsc.bcm.edu	37	17	36492024	36492024	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GRIA2	2891	hgsc.bcm.edu	37	4	158257863	158257863	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HLTF	6596	hgsc.bcm.edu	37	3	148766680	148766680	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IL16	3603	hgsc.bcm.edu	37	15	81582852	81582852	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IQGAP3	128239	hgsc.bcm.edu	37	1	156501004	156501009	+	In_Frame_Del	DEL	TGGAAC	TGGAAC	-	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	TGGAAC	TGGAAC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KDM5C	8242	hgsc.bcm.edu	37	X	53228214	53228214	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LAMA3	3909	hgsc.bcm.edu	37	18	21406683	21406683	+	Silent	SNP	C	C	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LIN7A	8825	hgsc.bcm.edu	37	12	81239680	81239680	+	Silent	SNP	G	G	C	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MICAL3	57553	hgsc.bcm.edu	37	22	18362165	18362165	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MLL3	58508	hgsc.bcm.edu	37	7	151848612	151848612	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NOTCH1	4851	hgsc.bcm.edu	37	9	139409100	139409100	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
OLFML2B	25903	hgsc.bcm.edu	37	1	161993198	161993198	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
OR10W1	81341	hgsc.bcm.edu	37	11	58035202	58035202	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PARP9	83666	hgsc.bcm.edu	37	3	122277192	122277192	+	Silent	SNP	G	G	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLAGL2	5326	hgsc.bcm.edu	37	20	30785078	30785078	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RCL1	10171	hgsc.bcm.edu	37	9	4849485	4849485	+	Silent	SNP	A	A	G	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SAMHD1	25939	hgsc.bcm.edu	37	20	35547821	35547821	+	Nonsense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SEPT8	23176	hgsc.bcm.edu	37	5	132096903	132096903	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPATA13	221178	hgsc.bcm.edu	37	13	24860482	24860482	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SYNE1	23345	hgsc.bcm.edu	37	6	152779924	152779924	+	Nonsense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TACC1	6867	hgsc.bcm.edu	37	8	38684806	38684806	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TTN	7273	hgsc.bcm.edu	37	2	179614187	179614187	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
USP18	11274	hgsc.bcm.edu	37	22	18640563	18640563	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
VHL	7428	hgsc.bcm.edu	37	3	10188261	10188261	+	Nonsense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZC3H6	376940	hgsc.bcm.edu	37	2	113060908	113060908	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4844-01	TCGA-B0-4844-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
