Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AKT1	207	hgsc.bcm.edu	37	14	105246445	105246445	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C11orf41	25758	hgsc.bcm.edu	37	11	33566672	33566672	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C1orf74	148304	hgsc.bcm.edu	37	1	209956952	209956953	+	Frame_Shift_Del	DEL	GT	GT	-	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C7orf46	340277	hgsc.bcm.edu	37	7	23737852	23737852	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CFTR	1080	hgsc.bcm.edu	37	7	117188815	117188818	+	Frame_Shift_Del	DEL	ATTA	ATTA	-	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	ATTA	ATTA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
COX6A2	1339	hgsc.bcm.edu	37	16	31439138	31439138	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DHDH	27294	hgsc.bcm.edu	37	19	49447699	49447699	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNAH10	196385	hgsc.bcm.edu	37	12	124352543	124352543	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNHD1	144132	hgsc.bcm.edu	37	11	6592218	6592218	+	Silent	SNP	G	G	T	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM47A	158724	hgsc.bcm.edu	37	X	34148257	34148257	+	Silent	SNP	A	A	T	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM54B	56181	hgsc.bcm.edu	37	1	26156098	26156098	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FANCM	57697	hgsc.bcm.edu	37	14	45606357	45606357	+	Silent	SNP	T	T	C	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FITM2	128486	hgsc.bcm.edu	37	20	42935674	42935674	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FLJ43860	389690	hgsc.bcm.edu	37	8	142488777	142488777	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GLRB	2743	hgsc.bcm.edu	37	4	158043499	158043499	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GRIK1	2897	hgsc.bcm.edu	37	21	31311718	31311718	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GTF3C5	9328	hgsc.bcm.edu	37	9	135932247	135932247	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KLK2	3817	hgsc.bcm.edu	37	19	51378100	51378100	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LMO7	4008	hgsc.bcm.edu	37	13	76195901	76195901	+	Frame_Shift_Del	DEL	A	A	-	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MS4A3	932	hgsc.bcm.edu	37	11	59834545	59834545	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYH3	4621	hgsc.bcm.edu	37	17	10541580	10541580	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYO5A	4644	hgsc.bcm.edu	37	15	52720682	52720682	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPAG4	6676	hgsc.bcm.edu	37	20	34206020	34206020	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
STAG3	10734	hgsc.bcm.edu	37	7	99796170	99796170	+	Silent	SNP	C	C	T	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
STARD9	57519	hgsc.bcm.edu	37	15	42979360	42979365	+	In_Frame_Del	DEL	AGCACA	AGCACA	-	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	AGCACA	AGCACA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMTC1	83857	hgsc.bcm.edu	37	12	29786235	29786235	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-B0-4848-01	TCGA-B0-4848-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
