Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCC4	10257	broad.mit.edu	37	13	95822853	95822853	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119025497	119025497	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179090956	179090956	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABLIM2	84448	broad.mit.edu	37	4	8021390	8021390	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40049293	40049293	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185697722	185697722	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACSL4	2182	broad.mit.edu	37	X	108912280	108912280	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACVR1	90	broad.mit.edu	37	2	158630598	158630598	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAD2	161931	broad.mit.edu	37	16	84230327	84230327	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77331255	77331255	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77331297	77331297	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43826136	43826136	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTSL4	54507	broad.mit.edu	37	1	150532263	150532263	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123019001	123019001	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123044258	123044258	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADCY7	113	broad.mit.edu	37	16	50328621	50328621	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70910816	70910816	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADNP2	22850	broad.mit.edu	37	18	77895513	77895513	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44149825	44149825	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44153558	44153558	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86806023	86806023	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AGTPBP1	23287	broad.mit.edu	37	9	88207490	88207490	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247024444	247024444	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHDC1	27245	broad.mit.edu	37	1	27875714	27875714	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105421090	105421090	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202591542	202591542	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALX4	60529	broad.mit.edu	37	11	44297022	44297022	+	Missense_Mutation	SNP	C	T	T	rs104894193	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AMBP	259	broad.mit.edu	37	9	116823355	116823355	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61967865	61967865	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14713040	14713040	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD13D	338692	broad.mit.edu	37	11	67068486	67068486	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27326979	27326979	+	Missense_Mutation	SNP	T	C	C	rs61730097	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37442500	37442500	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANXA5	308	broad.mit.edu	37	4	122604561	122604561	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANXA6	309	broad.mit.edu	37	5	150519732	150519732	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71767002	71767002	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AP3B1	8546	broad.mit.edu	37	5	77334907	77334907	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99100325	99100325	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APBB1	322	broad.mit.edu	37	11	6431909	6431909	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APC	324	broad.mit.edu	37	5	112176344	112176345	+	Frame_Shift_Ins	INS	-	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21233356	21233356	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39425422	39425422	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARFGEF2	10564	broad.mit.edu	37	20	47612354	47612354	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP30	257106	broad.mit.edu	37	1	161026313	161026313	+	Frame_Shift_Del	DEL	A	-	-	rs17854839	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGEF1	9138	broad.mit.edu	37	19	42408499	42408499	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111935618	111935618	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157521896	157521896	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	74985123	74985123	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66397567	66397567	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASB10	136371	broad.mit.edu	37	7	150883716	150883716	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASB13	79754	broad.mit.edu	37	10	5690974	5690974	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25966872	25966872	+	Silent	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	23977158	23977158	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATF7IP	55729	broad.mit.edu	37	12	14628904	14628904	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATG4A	115201	broad.mit.edu	37	X	107381402	107381402	+	Nonsense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25966975	25966975	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119509328	119509328	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84495688	84495688	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36047924	36047924	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP6AP1	537	broad.mit.edu	37	X	153662708	153662708	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP6V1B1	525	broad.mit.edu	37	2	71189971	71189971	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	117093811	117093811	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16328183	16328183	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAG1	573	broad.mit.edu	37	9	33264251	33264251	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79409727	79409727	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69949021	69949021	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31615405	31615405	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160295144	160295144	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BBC3	27113	broad.mit.edu	37	19	47725155	47725155	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129173135	129173135	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BET1L	51272	broad.mit.edu	37	11	205968	205968	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BMP4	652	broad.mit.edu	37	14	54417384	54417384	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRCC3	79184	broad.mit.edu	37	X	154344352	154344353	+	Frame_Shift_Ins	INS	-	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	884146	884146	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BSCL2	26580	broad.mit.edu	37	11	62462149	62462149	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56388049	56388049	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127418872	127418872	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127418877	127418877	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C11orf17	56672	broad.mit.edu	37	11	8936454	8936454	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C11orf24	53838	broad.mit.edu	37	11	68029863	68029863	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33564206	33564206	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C14orf174	161394	broad.mit.edu	37	14	77844713	77844713	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30825388	30825388	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C19orf35	374872	broad.mit.edu	37	19	2275750	2275750	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf122	127687	broad.mit.edu	37	1	38274716	38274716	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C20orf151	140893	broad.mit.edu	37	20	60989485	60989485	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3240664	3240664	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C20orf7	79133	broad.mit.edu	37	20	13797837	13797837	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C2orf71	388939	broad.mit.edu	37	2	29294843	29294843	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C3orf64	285203	broad.mit.edu	37	3	69047200	69047200	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C4BPA	722	broad.mit.edu	37	1	207300202	207300202	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C9orf96	169436	broad.mit.edu	37	9	136255356	136255356	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49071830	49071830	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7334269	7334269	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAMKK1	84254	broad.mit.edu	37	17	3775908	3775908	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CASS4	57091	broad.mit.edu	37	20	55027381	55027381	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38853150	38853150	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC104	112942	broad.mit.edu	37	2	55749245	55749245	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC36	339834	broad.mit.edu	37	3	49293670	49293670	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC54	84692	broad.mit.edu	37	3	107096890	107096890	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64108789	64108789	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC91	55297	broad.mit.edu	37	12	28460651	28460651	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCT8	10694	broad.mit.edu	37	21	30439048	30439048	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158301156	158301156	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CD4	920	broad.mit.edu	37	12	6924067	6924067	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDC42BPG	55561	broad.mit.edu	37	11	64606329	64606329	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDK12	51755	broad.mit.edu	37	17	37619372	37619372	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46931227	46931227	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109806260	109806260	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49076301	49076301	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55857583	55857583	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6710842	6710842	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6211094	6211094	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40081515	40081515	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLCN3	1182	broad.mit.edu	37	4	170625248	170625248	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLIP3	25999	broad.mit.edu	37	19	36509856	36509856	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178044364	178044364	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNN2	1265	broad.mit.edu	37	19	1037669	1037669	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNOT3	4849	broad.mit.edu	37	19	54651965	54651966	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246810501	246810501	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COG2	22796	broad.mit.edu	37	1	230805234	230805234	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121216054	121216054	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139729066	139729066	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL4A3BP	10087	broad.mit.edu	37	5	74754945	74754945	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47532364	47532364	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CORO1B	57175	broad.mit.edu	37	11	67207642	67207642	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69011755	69011755	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130024430	130024430	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPEB4	80315	broad.mit.edu	37	5	173370038	173370038	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207643042	207643043	+	Frame_Shift_Ins	INS	-	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRHR2	1395	broad.mit.edu	37	7	30702345	30702345	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRTC1	23373	broad.mit.edu	37	19	18887993	18887993	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRYM	1428	broad.mit.edu	37	16	21272583	21272583	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19363023	19363023	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3855604	3855604	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSRP2	1466	broad.mit.edu	37	12	77257107	77257107	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19996082	19996082	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17164806	17164806	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CXXC1	30827	broad.mit.edu	37	18	47812979	47812979	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYFIP1	23191	broad.mit.edu	37	15	22955133	22955133	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6646021	6646021	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DCST2	127579	broad.mit.edu	37	1	154997047	154997047	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DCUN1D3	123879	broad.mit.edu	37	16	20871211	20871211	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DDA1	79016	broad.mit.edu	37	19	17430418	17430418	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65962172	65962172	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DENND4B	9909	broad.mit.edu	37	1	153904719	153904719	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32188793	32188793	+	Missense_Mutation	SNP	G	A	A	rs12158711	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DET1	55070	broad.mit.edu	37	15	89056277	89056277	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42793830	42793830	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHRS4	10901	broad.mit.edu	37	14	24424296	24424297	+	Missense_Mutation	DNP	GT	AG	AG	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125467060	125467060	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHX58	79132	broad.mit.edu	37	17	40263345	40263345	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41582145	41582145	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DIS3	22894	broad.mit.edu	37	13	73340159	73340159	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DIS3L	115752	broad.mit.edu	37	15	66618704	66618704	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233195446	233195446	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DISP2	85455	broad.mit.edu	37	15	40661343	40661343	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13356895	13356895	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DMBX1	127343	broad.mit.edu	37	1	46972769	46972769	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DMWD	1762	broad.mit.edu	37	19	46290079	46290079	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7728027	7728027	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11550505	11550505	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJB2	3300	broad.mit.edu	37	2	220149689	220149689	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJC17	55192	broad.mit.edu	37	15	41067229	41067231	+	In_Frame_Del	DEL	CTT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	CTT	CTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOPEY2	9980	broad.mit.edu	37	21	37591690	37591690	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DPAGT1	1798	broad.mit.edu	37	11	118971120	118971120	+	Splice_Site	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DPCD	25911	broad.mit.edu	37	10	103360984	103360984	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DPP3	10072	broad.mit.edu	37	11	66262690	66262690	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28598103	28598103	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41416060	41416060	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29046491	29046491	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7583192	7583192	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DTX3	196403	broad.mit.edu	37	12	58000848	58000848	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DTX3	196403	broad.mit.edu	37	12	58001073	58001073	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4721810	4721810	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ECEL1	9427	broad.mit.edu	37	2	233347836	233347836	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EGLN2	112398	broad.mit.edu	37	19	41306993	41306993	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EGLN2	112398	broad.mit.edu	37	19	41307235	41307235	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF3L	51386	broad.mit.edu	37	22	38258975	38258975	+	Splice_Site	DEL	G	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF4A3	9775	broad.mit.edu	37	17	78113889	78113889	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ELAC2	60528	broad.mit.edu	37	17	12905673	12905673	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ELANE	1991	broad.mit.edu	37	19	852901	852901	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ELL2	22936	broad.mit.edu	37	5	95226808	95226808	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ENG	2022	broad.mit.edu	37	9	130579468	130579468	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ENOSF1	55556	broad.mit.edu	37	18	697349	697349	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ENPP7	339221	broad.mit.edu	37	17	77710966	77710966	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EP300	2033	broad.mit.edu	37	22	41574312	41574312	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132537936	132537936	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPB41	2035	broad.mit.edu	37	1	29314068	29314068	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66231674	66231674	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142561951	142561951	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144941154	144941154	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERAP2	64167	broad.mit.edu	37	5	96251400	96251400	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37882078	37882078	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERMP1	79956	broad.mit.edu	37	9	5811273	5811273	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ESPN	83715	broad.mit.edu	37	1	6501114	6501114	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ESR1	2099	broad.mit.edu	37	6	152265601	152265601	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	13971309	13971309	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EVI2A	2123	broad.mit.edu	37	17	29647410	29647410	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EXD3	54932	broad.mit.edu	37	9	140243598	140243598	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94733826	94733826	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72725651	72725651	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	119122871	119122871	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154158320	154158320	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAAH	2166	broad.mit.edu	37	1	46871324	46871324	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96278286	96278286	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM131A	131408	broad.mit.edu	37	3	184062584	184062584	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71162230	71162230	+	Nonsense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM178A	55719	broad.mit.edu	37	10	102676519	102676519	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119301393	119301393	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM198B	51313	broad.mit.edu	37	4	159092386	159092386	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM35A	54537	broad.mit.edu	37	10	88911131	88911131	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190203594	190203594	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM78B	149297	broad.mit.edu	37	1	166135352	166135352	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM83C	128876	broad.mit.edu	37	20	33875605	33875605	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187540370	187540370	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBXL14	144699	broad.mit.edu	37	12	1702059	1702059	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FES	2242	broad.mit.edu	37	15	91428282	91428282	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FGA	2243	broad.mit.edu	37	4	155508013	155508013	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84606643	84606643	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FNIP1	96459	broad.mit.edu	37	5	131066705	131066706	+	Frame_Shift_Del	DEL	TT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	TT	TT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FOXO3	2309	broad.mit.edu	37	6	108985226	108985226	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39262566	39262566	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FTMT	94033	broad.mit.edu	37	5	121187789	121187789	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	53922839	53922839	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61898462	61898462	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FZD10	11211	broad.mit.edu	37	12	130647929	130647929	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
G3BP1	10146	broad.mit.edu	37	5	151183518	151183518	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17446137	17446137	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151821591	151821591	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16216674	16216674	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36029483	36029483	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GATAD2A	54815	broad.mit.edu	37	19	19609378	19609378	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120599736	120599736	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GDF10	2662	broad.mit.edu	37	10	48429372	48429372	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GEMIN5	25929	broad.mit.edu	37	5	154268882	154268882	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GJD4	219770	broad.mit.edu	37	10	35897554	35897554	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLO1	2739	broad.mit.edu	37	6	38652183	38652183	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151239530	151239530	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56377829	56377829	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GP1BA	2811	broad.mit.edu	37	17	4837372	4837373	+	Frame_Shift_Ins	INS	-	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20327330	20327330	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR107	57720	broad.mit.edu	37	9	132897302	132897302	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431755	135431755	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131466593	131466593	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154146817	154146817	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR180	160897	broad.mit.edu	37	13	95264569	95264569	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9857380	9857380	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3015545	3015545	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRK6	2870	broad.mit.edu	37	5	176868029	176868029	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86468878	86468878	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108631735	108631735	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GYS1	2997	broad.mit.edu	37	19	49490600	49490600	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GYS1	2997	broad.mit.edu	37	19	49490607	49490607	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
H2AFY2	55506	broad.mit.edu	37	10	71868887	71868887	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26416536	26416536	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5291119	5291119	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18705937	18705937	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73987615	73987615	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37291914	37291914	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEATR7A	727957	broad.mit.edu	37	8	145246743	145246745	+	In_Frame_Del	DEL	CTT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	CTT	CTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197092917	197092917	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197157345	197157345	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HHEX	3087	broad.mit.edu	37	10	94454326	94454328	+	In_Frame_Del	DEL	AAG	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	AAG	AAG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HHIPL1	84439	broad.mit.edu	37	14	100129284	100129284	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIST1H2AC	8334	broad.mit.edu	37	6	26124633	26124633	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HMGB2	3148	broad.mit.edu	37	4	174253268	174253270	+	In_Frame_Del	DEL	TCT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	TCT	TCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62484649	62484650	+	Frame_Shift_Del	DEL	AA	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	AA	AA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXA9	3205	broad.mit.edu	37	7	27203284	27203284	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXC11	3227	broad.mit.edu	37	12	54367383	54367383	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154863209	154863209	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IDH3G	3421	broad.mit.edu	37	X	153059774	153059774	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IFIT1B	439996	broad.mit.edu	37	10	91143311	91143311	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IFNA7	3444	broad.mit.edu	37	9	21201942	21201943	+	Missense_Mutation	DNP	GA	TT	TT	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	GA	GA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21205180	21205180	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGFBP7	3490	broad.mit.edu	37	4	57898593	57898593	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGFBP7	3490	broad.mit.edu	37	4	57898642	57898642	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151156202	151156202	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154408588	154408588	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ILF3	3609	broad.mit.edu	37	19	10787852	10787852	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143007357	143007357	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INPP5F	22876	broad.mit.edu	37	10	121571296	121571296	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IPMK	253430	broad.mit.edu	37	10	59956101	59956101	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IQCK	124152	broad.mit.edu	37	16	19775436	19775436	+	Splice_Site	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IQCK	124152	broad.mit.edu	37	16	19800174	19800174	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54797504	54797504	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31374511	31374511	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7777015	7777015	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7791150	7791150	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITM2C	81618	broad.mit.edu	37	2	231741659	231741659	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IYD	389434	broad.mit.edu	37	6	150690236	150690236	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JMJD7-PLA2G4B	8681	broad.mit.edu	37	15	42132730	42132730	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JUB	84962	broad.mit.edu	37	14	23445902	23445902	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KBTBD6	89890	broad.mit.edu	37	13	41705364	41705364	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5020549	5020549	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNN2	3781	broad.mit.edu	37	5	113822745	113822745	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196274362	196274362	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	66999421	66999421	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94730807	94730807	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24559327	24559327	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8793021	8793021	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182200	57182200	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138584306	138584306	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86542277	86542277	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94088152	94088152	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1543	57662	broad.mit.edu	37	19	7677807	7677807	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869844	36869844	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44844357	44844357	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10384065	10384065	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF24	347240	broad.mit.edu	37	9	34257489	34257489	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF3C	3797	broad.mit.edu	37	2	26203973	26203973	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57976896	57976896	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF5B	3799	broad.mit.edu	37	10	32307245	32307245	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158064480	158064480	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53519514	53519514	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLHL7	55975	broad.mit.edu	37	7	23191797	23191797	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135013087	135013087	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123087702	123087702	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KPNA1	3836	broad.mit.edu	37	3	122170886	122170886	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45757396	45757396	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KPTN	11133	broad.mit.edu	37	19	47980969	47980969	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRR1	11103	broad.mit.edu	37	12	75900592	75900592	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53045390	53045390	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53202484	53202484	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRTAP19-2	337969	broad.mit.edu	37	21	31859576	31859576	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118199247	118199248	+	Frame_Shift_Ins	INS	-	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6949184	6949184	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107576084	107576084	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAMP1	3916	broad.mit.edu	37	13	113965071	113965071	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LEFTY2	7044	broad.mit.edu	37	1	226128690	226128690	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LEMD2	221496	broad.mit.edu	37	6	33744975	33744975	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LENG8	114823	broad.mit.edu	37	19	54967841	54967841	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LNPEP	4012	broad.mit.edu	37	5	96350727	96350727	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LOC727896	727896	broad.mit.edu	37	18	2946534	2946534	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LONRF1	91694	broad.mit.edu	37	8	12592895	12592900	+	In_Frame_Del	DEL	GGCTCA	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	GGCTCA	GGCTCA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LPIN3	64900	broad.mit.edu	37	20	39978750	39978750	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LPP	4026	broad.mit.edu	37	3	188590487	188590487	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59274640	59274640	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57605026	57605026	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170030631	170030631	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44145522	44145522	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44175571	44175571	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC27	80313	broad.mit.edu	37	10	134161565	134161565	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC43	254050	broad.mit.edu	37	12	122674785	122674785	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRFIP2	9209	broad.mit.edu	37	3	37125271	37125271	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85521681	85521681	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	24518815	24518815	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47305943	47305943	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAP3K3	4215	broad.mit.edu	37	17	61766161	61766161	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAP4K4	9448	broad.mit.edu	37	2	102501664	102501664	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MARCH8	220972	broad.mit.edu	37	10	45953840	45953840	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220808856	220808856	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57894296	57894296	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAST2	23139	broad.mit.edu	37	1	46500672	46500672	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66386058	66386058	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100382358	100382358	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCOLN1	57192	broad.mit.edu	37	19	7595355	7595355	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49953240	49953240	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCTP1	79772	broad.mit.edu	37	5	94253679	94253679	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37565271	37565271	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150908555	150908555	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112751965	112751965	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFAP4	4239	broad.mit.edu	37	17	19287984	19287984	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFSD8	256471	broad.mit.edu	37	4	128842707	128842707	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR153-1	406944	broad.mit.edu	37	2	220158855	220158855	+	miRNA	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR320B-2	100302180	broad.mit.edu	37	1	224444738	224444738	+	miRNA	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151859636	151859636	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2524327	2524327	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MOBKL2C	148932	broad.mit.edu	37	1	47078581	47078581	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108836867	108836867	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MPV17	4358	broad.mit.edu	37	2	27535925	27535925	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MRPL32	64983	broad.mit.edu	37	7	42977150	42977150	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MRPS22	56945	broad.mit.edu	37	3	139062900	139062900	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MSGN1	343930	broad.mit.edu	37	2	17998261	17998261	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MSRB3	253827	broad.mit.edu	37	12	65857074	65857074	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MST1	4485	broad.mit.edu	37	3	49721844	49721844	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11182163	11182163	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29599785	29599785	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29600226	29600226	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9059693	9059701	+	In_Frame_Del	DEL	TGTGGCCTT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	TGTGGCCTT	TGTGGCCTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100679747	100679747	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1028224	1028224	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3235384	3235384	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8409751	8409751	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8421992	8421992	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50774688	50774688	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10348583	10348583	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10299971	10299971	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYL1	4632	broad.mit.edu	37	2	211159122	211159122	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18059537	18059537	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171092598	171092598	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO6	4646	broad.mit.edu	37	6	76589611	76589611	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYOM1	8736	broad.mit.edu	37	18	3085102	3085102	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2005806	2005806	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2077161	2077161	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
N4BP1	9683	broad.mit.edu	37	16	48595100	48595100	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NAA35	60560	broad.mit.edu	37	9	88631578	88631578	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201779752	201779752	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCOA4	8031	broad.mit.edu	37	10	51584973	51584973	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152534241	152534241	+	Silent	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84031849	84031849	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20691274	20691274	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156642564	156642564	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29556200	29556200	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NF2	4771	broad.mit.edu	37	22	30051666	30051666	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204948496	204948496	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77193724	77193724	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFS1	9054	broad.mit.edu	37	20	34262295	34262295	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233839410	233839410	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NGF	4803	broad.mit.edu	37	1	115829215	115829215	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NIPAL2	79815	broad.mit.edu	37	8	99217418	99217418	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57060873	57060873	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOC3L	64318	broad.mit.edu	37	10	96116290	96116290	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2955332	2955332	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOXA1	10811	broad.mit.edu	37	9	140327515	140327516	+	Frame_Shift_Del	DEL	CT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	CT	CT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NPAS4	266743	broad.mit.edu	37	11	66192164	66192164	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NPEPPS	9520	broad.mit.edu	37	17	45669320	45669320	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100957204	100957204	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NR6A1	2649	broad.mit.edu	37	9	127298227	127298227	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	83635237	83635238	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224505589	224505589	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167654954	167654954	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OLAH	55301	broad.mit.edu	37	10	15113840	15113840	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR10G7	390265	broad.mit.edu	37	11	123909420	123909420	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR10G7	390265	broad.mit.edu	37	11	123909474	123909474	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123900583	123900583	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123900597	123900597	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR3A1	4994	broad.mit.edu	37	17	3195465	3195465	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20215693	20215693	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4S2	219431	broad.mit.edu	37	11	55418395	55418395	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR51Q1	390061	broad.mit.edu	37	11	5444095	5444095	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98072884	98072884	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ORAI1	84876	broad.mit.edu	37	12	122079150	122079150	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52841244	52841244	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
P4HA1	5033	broad.mit.edu	37	10	74834565	74834565	+	Splice_Site	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PAAF1	80227	broad.mit.edu	37	11	73610254	73610254	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PAG1	55824	broad.mit.edu	37	8	81897572	81897572	+	Silent	SNP	G	A	A	rs113484085	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PAN3	255967	broad.mit.edu	37	13	28794507	28794507	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PAQR7	164091	broad.mit.edu	37	1	26189565	26189567	+	In_Frame_Del	DEL	AGA	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	AGA	AGA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150780186	150780186	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA11	56138	broad.mit.edu	37	5	140250117	140250117	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140176930	140176930	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553970	140553970	+	Silent	SNP	C	G	G	rs17844460	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554720	140554720	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554722	140554722	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554727	140554727	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHGA3	56112	broad.mit.edu	37	5	140725001	140725001	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDE4C	5143	broad.mit.edu	37	19	18329753	18329753	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDIA2	64714	broad.mit.edu	37	16	336667	336667	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDLIM1	9124	broad.mit.edu	37	10	96998377	96998377	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15126717	15126717	+	Splice_Site	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PEMT	10400	broad.mit.edu	37	17	17425656	17425656	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PEX11B	8799	broad.mit.edu	37	1	145522547	145522547	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137191121	137191121	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PGS1	9489	broad.mit.edu	37	17	76388741	76388741	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHB	5245	broad.mit.edu	37	17	47484173	47484173	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHF16	9767	broad.mit.edu	37	X	46913820	46913820	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111685552	111685552	+	Splice_Site	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60612366	60612366	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHTF1	10745	broad.mit.edu	37	1	114243546	114243546	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHYHIP	9796	broad.mit.edu	37	8	22078925	22078925	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151274728	151274728	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151288484	151288484	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIGN	23556	broad.mit.edu	37	18	59814310	59814310	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35090187	35090187	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39609379	39609379	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIK3CD	5293	broad.mit.edu	37	1	9781596	9781596	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIP4K2B	8396	broad.mit.edu	37	17	36927421	36927421	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42364521	42364521	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42040264	42040264	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28841245	28841245	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLCB3	5331	broad.mit.edu	37	11	64024202	64024202	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLCD1	5333	broad.mit.edu	37	3	38050545	38050545	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144992015	144992015	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39914446	39914446	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43973054	43973054	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLK1	5347	broad.mit.edu	37	16	23690512	23690513	+	Frame_Shift_Del	DEL	TC	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	TC	TC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72184607	72184607	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74315449	74315449	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLM	27434	broad.mit.edu	37	7	44113413	44113413	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94539704	94539704	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90142264	90142264	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRKD3	23683	broad.mit.edu	37	2	37501708	37501708	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50031329	50031329	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1557299	1557299	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRPS1L1	221823	broad.mit.edu	37	7	18066798	18066798	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRSS33	260429	broad.mit.edu	37	16	2834653	2834653	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSMD1	5707	broad.mit.edu	37	2	231948335	231948335	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSMD11	5717	broad.mit.edu	37	17	30800953	30800953	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117491858	117491858	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3002826	3002826	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41306678	41306678	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PYGO1	26108	broad.mit.edu	37	15	55841138	55841138	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32953741	32953741	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32975569	32975569	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAB1A	5861	broad.mit.edu	37	2	65316203	65316203	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAB43	339122	broad.mit.edu	37	3	128864606	128864606	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RABEP1	9135	broad.mit.edu	37	17	5280457	5280457	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAD52	5893	broad.mit.edu	37	12	1036424	1036424	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109371408	109371408	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAPH1	65059	broad.mit.edu	37	2	204304389	204304389	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASGEF1A	221002	broad.mit.edu	37	10	43696217	43696217	+	Silent	SNP	C	T	T	rs61758758	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASL10B	91608	broad.mit.edu	37	17	34068079	34068079	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RB1	5925	broad.mit.edu	37	13	49051536	49051536	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM11	54033	broad.mit.edu	37	21	15599295	15599295	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM12B	389677	broad.mit.edu	37	8	94745931	94745931	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114395588	114395588	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM42	79171	broad.mit.edu	37	19	36128233	36128233	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50005783	50005783	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111688861	111688861	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111701250	111701250	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90021181	90021181	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22865538	22865538	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHOU	58480	broad.mit.edu	37	1	228879349	228879349	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHOXF1	158800	broad.mit.edu	37	X	119249701	119249701	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RIPK2	8767	broad.mit.edu	37	8	90784903	90784903	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RMND5B	64777	broad.mit.edu	37	5	177575020	177575020	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF14	9604	broad.mit.edu	37	5	141357883	141357883	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101299911	101299911	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF217	154214	broad.mit.edu	37	6	125397823	125397823	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF31	55072	broad.mit.edu	37	14	24619565	24619565	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF43	54894	broad.mit.edu	37	17	56492887	56492887	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77542422	77542422	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RORC	6097	broad.mit.edu	37	1	151785790	151785790	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RORC	6097	broad.mit.edu	37	1	151789698	151789698	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38145101	38145101	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPS6KB1	6198	broad.mit.edu	37	17	58012656	58012656	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78704364	78704364	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7230314	7230314	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RRP1B	23076	broad.mit.edu	37	21	45107597	45107597	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCAPER	49855	broad.mit.edu	37	15	76958026	76958026	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38949441	38949441	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEC13	6396	broad.mit.edu	37	3	10346828	10346828	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SELPLG	6404	broad.mit.edu	37	12	109017315	109017315	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERAC1	84947	broad.mit.edu	37	6	158532468	158532468	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61256926	61256926	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPIND1	3053	broad.mit.edu	37	22	21140426	21140426	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINI1	5274	broad.mit.edu	37	3	167508322	167508322	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERTAD2	9792	broad.mit.edu	37	2	64863637	64863637	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47155460	47155460	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17787382	17787382	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIGLEC11	114132	broad.mit.edu	37	19	50461598	50461598	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIL1	64374	broad.mit.edu	37	5	138456826	138456826	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232650521	232650521	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC11A1	6556	broad.mit.edu	37	2	219252307	219252307	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92378916	92378916	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC38A11	151258	broad.mit.edu	37	2	165768159	165768159	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC3A2	6520	broad.mit.edu	37	11	62623778	62623778	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC5A10	125206	broad.mit.edu	37	17	18916767	18916767	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24920260	24920260	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC6A12	6539	broad.mit.edu	37	12	309834	309834	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC7A6	9057	broad.mit.edu	37	16	68321684	68321685	+	Frame_Shift_Ins	INS	-	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86368261	86368261	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11143964	11143964	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47677513	47677513	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56566385	56566385	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMC6	79677	broad.mit.edu	37	2	17902257	17902257	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMCR8	140775	broad.mit.edu	37	17	18219509	18219509	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMEK1	55671	broad.mit.edu	37	14	91927912	91927913	+	Frame_Shift_Del	DEL	TT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	TT	TT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMOX	54498	broad.mit.edu	37	20	4163091	4163091	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNAP91	9892	broad.mit.edu	37	6	84302944	84302944	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNAPC5	10302	broad.mit.edu	37	15	66790065	66790065	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96943382	96943382	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179316774	179316774	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SOS2	6655	broad.mit.edu	37	14	50666497	50666497	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16261593	16261593	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPG11	80208	broad.mit.edu	37	15	44888371	44888371	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPNS2	124976	broad.mit.edu	37	17	4434362	4434362	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPRR3	6707	broad.mit.edu	37	1	152975911	152975911	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41029412	41029412	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SRCIN1	80725	broad.mit.edu	37	17	36705381	36705381	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100482088	100482090	+	In_Frame_Del	DEL	AAG	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	AAG	AAG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SSH3	54961	broad.mit.edu	37	11	67075160	67075160	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149482799	149482799	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53030917	53030917	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52539137	52539137	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAT6	6778	broad.mit.edu	37	12	57498535	57498535	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STK38L	23012	broad.mit.edu	37	12	27461270	27461270	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STOML1	9399	broad.mit.edu	37	15	74281026	74281026	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37193392	37193392	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STRN3	29966	broad.mit.edu	37	14	31420083	31420083	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STX11	8676	broad.mit.edu	37	6	144508482	144508482	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SUCLG2	8801	broad.mit.edu	37	3	67546326	67546326	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152542150	152542150	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNGR3	9143	broad.mit.edu	37	16	2043042	2043042	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYT15	83849	broad.mit.edu	37	10	46963839	46963839	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYVN1	84447	broad.mit.edu	37	11	64898665	64898665	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAAR5	9038	broad.mit.edu	37	6	132910127	132910127	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123844471	123844471	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAGLN3	29114	broad.mit.edu	37	3	111719762	111719762	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D17	79735	broad.mit.edu	37	19	50381462	50381465	+	Frame_Shift_Del	DEL	CTCT	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	CTCT	CTCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D17	79735	broad.mit.edu	37	19	50391043	50391043	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D23	55773	broad.mit.edu	37	3	100042461	100042461	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D3B	414059	broad.mit.edu	37	17	34493433	34493433	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBL3	10607	broad.mit.edu	37	16	2026055	2026055	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46656745	46656745	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27183560	27183560	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30701622	30701622	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43801837	43801837	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THOC6	79228	broad.mit.edu	37	16	3076526	3076526	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THTPA	79178	broad.mit.edu	37	14	24026241	24026241	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32492816	32492816	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32513436	32513436	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TLK2	11011	broad.mit.edu	37	17	60637441	60637441	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35714321	35714321	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TLR10	81793	broad.mit.edu	37	4	38775818	38775818	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TM2D2	83877	broad.mit.edu	37	8	38848862	38848862	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMCC1	23023	broad.mit.edu	37	3	129546961	129546961	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMCC3	57458	broad.mit.edu	37	12	94975436	94975436	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129559558	129559558	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM38B	55151	broad.mit.edu	37	9	108536277	108536277	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM97	27346	broad.mit.edu	37	17	26653714	26653714	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMF1	7110	broad.mit.edu	37	3	69088741	69088741	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMOD4	29765	broad.mit.edu	37	1	151147019	151147019	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29920872	29920872	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117848833	117848833	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNFAIP8L3	388121	broad.mit.edu	37	15	51397273	51397273	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32015543	32015543	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32017812	32017812	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578212	7578212	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24305872	24305872	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRAPPC1	58485	broad.mit.edu	37	17	7834023	7834023	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45523258	45523258	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TREML4	285852	broad.mit.edu	37	6	41197850	41197850	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55032522	55032522	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRIM49	57093	broad.mit.edu	37	11	89537226	89537226	+	Splice_Site	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38168624	38168624	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230654396	230654396	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRMT1	55621	broad.mit.edu	37	19	13220782	13220782	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRPC4AP	26133	broad.mit.edu	37	20	33603887	33603887	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45795728	45795728	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81609994	81609994	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC39C	125488	broad.mit.edu	37	18	21710336	21710336	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179400235	179400235	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUBB	203068	broad.mit.edu	37	6	30691481	30691481	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUFT1	7286	broad.mit.edu	37	1	151535065	151535065	+	Missense_Mutation	SNP	G	A	A	rs113585307	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154227752	154227752	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBQLN3	50613	broad.mit.edu	37	11	5529517	5529517	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UCN3	114131	broad.mit.edu	37	10	5415994	5415994	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UGT1A1	54658	broad.mit.edu	37	2	234669127	234669127	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UHRF1BP1L	23074	broad.mit.edu	37	12	100502181	100502181	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43519186	43519186	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33510469	33510469	+	Silent	SNP	C	T	T	rs74403538	by1000genomes	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UNG	7374	broad.mit.edu	37	12	109541373	109541373	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UPRT	139596	broad.mit.edu	37	X	74520734	74520734	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UQCC	55245	broad.mit.edu	37	20	33961989	33961989	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP13	8975	broad.mit.edu	37	3	179478997	179478997	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP19	10869	broad.mit.edu	37	3	49153190	49153190	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP43	124739	broad.mit.edu	37	17	9583621	9583621	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP43	124739	broad.mit.edu	37	17	9631817	9631817	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP50	373509	broad.mit.edu	37	15	50833262	50833262	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31760034	31760034	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS18	57617	broad.mit.edu	37	15	41192359	41192359	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VSTM2L	128434	broad.mit.edu	37	20	36572445	36572445	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6076653	6076653	+	Missense_Mutation	SNP	A	G	G	rs112100565	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6122671	6122671	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDHD1	11169	broad.mit.edu	37	14	55411062	55411062	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	53907852	53907852	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68614299	68614299	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96051602	96051602	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WTAP	9589	broad.mit.edu	37	6	160164822	160164822	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69832614	69832614	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168099974	168099974	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56436132	56436132	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17294474	17294474	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
YTHDF1	54915	broad.mit.edu	37	20	61845285	61845285	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50280639	50280639	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB12	221527	broad.mit.edu	37	6	31868726	31868726	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB4	57659	broad.mit.edu	37	17	7365705	7365705	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB44	29068	broad.mit.edu	37	11	130131061	130131061	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZDHHC7	55625	broad.mit.edu	37	16	85010045	85010045	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72845484	72845484	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72993580	72993580	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77617102	77617102	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77775451	77775451	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFP82	284406	broad.mit.edu	37	19	36883652	36883655	+	Frame_Shift_Del	DEL	TACA	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	TACA	TACA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106646501	106646501	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZIK1	284307	broad.mit.edu	37	19	58096319	58096319	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70465236	70465236	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM5	9205	broad.mit.edu	37	13	20398645	20398645	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYND12	84217	broad.mit.edu	37	1	42914182	42914182	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF12	7559	broad.mit.edu	37	7	6731351	6731351	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52193033	52193033	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44471168	44471168	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF234	10780	broad.mit.edu	37	19	44661005	44661005	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74587548	74587548	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43306339	43306339	+	Silent	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF319	57567	broad.mit.edu	37	16	58031166	58031166	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF354A	6940	broad.mit.edu	37	5	178139363	178139363	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF408	79797	broad.mit.edu	37	11	46726767	46726767	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF433	163059	broad.mit.edu	37	19	12126007	12126007	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109734321	109734321	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF544	27300	broad.mit.edu	37	19	58772838	58772838	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF57	126295	broad.mit.edu	37	19	2918270	2918270	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF586	54807	broad.mit.edu	37	19	58290702	58290702	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF619	285267	broad.mit.edu	37	3	40524165	40524165	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71654527	71654527	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF687	57592	broad.mit.edu	37	1	151259818	151259818	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF750	79755	broad.mit.edu	37	17	80789303	80789303	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF777	27153	broad.mit.edu	37	7	149129497	149129497	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF862	643641	broad.mit.edu	37	7	149545507	149545507	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22574543	22574543	+	Silent	SNP	A	G	G	rs74169607	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZSCAN29	146050	broad.mit.edu	37	15	43656464	43656464	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5098-01	TCGA-B0-5098-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
