Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
APC	324	hgsc.bcm.edu	37	5	112175515	112175515	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATM	472	hgsc.bcm.edu	37	11	108178679	108178679	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATM	472	hgsc.bcm.edu	37	11	108216628	108216628	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATRX	546	hgsc.bcm.edu	37	X	76849193	76849193	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BACH2	60468	hgsc.bcm.edu	37	6	90648052	90648052	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C5orf36	.	hgsc.bcm.edu	37	5	93856455	93856455	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CH25H	9023	hgsc.bcm.edu	37	10	90966990	90966990	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EFHB	151651	hgsc.bcm.edu	37	3	19921291	19921291	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ERBB2	2064	hgsc.bcm.edu	37	17	37880257	37880257	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBXW7	55294	hgsc.bcm.edu	37	4	153244135	153244135	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBXW7	55294	hgsc.bcm.edu	37	4	153253839	153253839	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GDA	9615	hgsc.bcm.edu	37	9	74860096	74860096	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GOT2	2806	hgsc.bcm.edu	37	16	58743325	58743325	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HTT	3064	hgsc.bcm.edu	37	4	3129046	3129046	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LILRB5	10990	hgsc.bcm.edu	37	19	54760570	54760570	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LRP2	4036	hgsc.bcm.edu	37	2	170147488	170147488	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LRRC18	474354	hgsc.bcm.edu	37	10	50121787	50121787	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MERTK	10461	hgsc.bcm.edu	37	2	112777062	112777062	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NLRP9	338321	hgsc.bcm.edu	37	19	56243438	56243438	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NRCAM	4897	hgsc.bcm.edu	37	7	107820706	107820706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ODZ1	10178	hgsc.bcm.edu	37	X	123630881	123630881	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SASS6	163786	hgsc.bcm.edu	37	1	100573196	100573196	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SEL1L2	80343	hgsc.bcm.edu	37	20	13850814	13850814	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SEMA3E	9723	hgsc.bcm.edu	37	7	82996992	82996992	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLTM	79811	hgsc.bcm.edu	37	15	59189413	59189413	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SMURF2	64750	hgsc.bcm.edu	37	17	62547795	62547795	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TAS2R46	259292	hgsc.bcm.edu	37	12	11214646	11214646	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TP53	7157	hgsc.bcm.edu	37	17	7578201	7578201	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
USP44	84101	hgsc.bcm.edu	37	12	95922632	95922632	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
XIAP	331	hgsc.bcm.edu	37	X	123020280	123020280	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
XRCC4	7518	hgsc.bcm.edu	37	5	82491753	82491753	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF266	10781	hgsc.bcm.edu	37	19	9524701	9524701	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5400-01	TCGA-B0-5400-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
