Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AADAC	13	broad.mit.edu	37	3	151545364	151545364	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20682904	20682904	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AGAP3	116988	broad.mit.edu	37	7	150825758	150825758	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	128865042	128865042	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108196255	108196255	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAG4	9530	broad.mit.edu	37	8	38034599	38034599	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10604013	10604013	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCNF	899	broad.mit.edu	37	16	2506955	2506955	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP2C8	1558	broad.mit.edu	37	10	96797036	96797036	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76506511	76506511	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	108518837	108518837	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27729702	27729702	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLT8D2	83468	broad.mit.edu	37	12	104387219	104387219	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65621770	65621770	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL1RL2	8808	broad.mit.edu	37	2	102851636	102851636	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86385746	86385746	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68171453	68171453	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0174	9798	broad.mit.edu	37	16	71961539	71961539	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLF8	11279	broad.mit.edu	37	X	56310756	56310756	+	Silent	SNP	T	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LTA4H	4048	broad.mit.edu	37	12	96414872	96414872	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MECOM	2122	broad.mit.edu	37	3	168833806	168833806	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR663B	100302269	broad.mit.edu	37	2	133014651	133014652	+	miRNA	INS	-	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16890580	16890580	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NEFH	4744	broad.mit.edu	37	22	29879399	29879399	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82595325	82595325	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	32338297	32338304	+	Frame_Shift_Del	DEL	GGCGCTCC	-	-	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	GGCGCTCC	GGCGCTCC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51799018	51799018	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLDIP2	26073	broad.mit.edu	37	17	26684390	26684391	+	Splice_Site	INS	-	C	C	rs67934205;rs68078752	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43439612	43439612	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44070946	44070946	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC22A11	55867	broad.mit.edu	37	11	64337144	64337144	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228973613	228973613	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TDRD3	81550	broad.mit.edu	37	13	61103273	61103273	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69816847	69816847	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UTP23	84294	broad.mit.edu	37	8	117783792	117783792	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VAX2	25806	broad.mit.edu	37	2	71160067	71160067	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10191469	10191469	+	Splice_Site	SNP	A	G	G	rs5030816	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85742692	85742692	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207174280	207174280	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68234548	68234548	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127013660	127013660	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-B8-4622-01	TCGA-B8-4622-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
