Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ACPP	55	genome.wustl.edu	37	3	132047117	132047117	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	132047117	132047117	C	T	SNP	ACPP	NM_001134194	human	genbank	57_37b	+1	reviewed	missense	c.127	p.R43W	1.000	superfamily_SSF53254,HMMPfam_Acid_phosphat_A,PatternScan_HIS_ACID_PHOSPHAT_1	superfamily_SSF53254,HMMPfam_Acid_phosphat_A,PatternScan_HIS_ACID_PHOSPHAT_1,PatternScan_HIS_ACID_PHOSPHAT_2	-	no_errors	
AKAP6	9472	genome.wustl.edu	37	14	33004940	33004940	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	33004940	33004940	C	A	SNP	AKAP6	NM_004274	human	genbank	57_37b	+1	reviewed	missense	c.505	p.L169M	0.993	NULL	HMMSmart_SM00150,superfamily_Spectrin repeat,PatternScan_PFKB_KINASES_2	-	no_errors	
ALPK2	115701	genome.wustl.edu	37	18	56203182	56203182	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	56203182	56203182	C	G	SNP	ALPK2	NM_052947	human	genbank	57_37b	-1	validated	missense	c.4237	p.E1413Q	0.003	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00811,HMMPfam_Alpha_kinase	-	no_errors	
BACH2	60468	genome.wustl.edu	37	6	90660896	90660896	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90660896	90660896	T	G	SNP	BACH2	NM_021813	human	genbank	57_37b	-1	validated	missense	c.929	p.D310A	1.000	NULL	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,superfamily_Euk_transcr_DNA,HMMSmart_BRLZ,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1	-	no_errors	
C20orf177	63939	genome.wustl.edu	37	20	58519658	58519658	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	58519658	58519658	C	T	SNP	C20orf177	NM_022106	human	genbank	57_37b	+1	predicted	silent	c.660	p.S220	1.000	NULL	NULL	-	no_errors	
C2orf47	79568	genome.wustl.edu	37	2	200820884	200820884	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	200820884	200820884	G	T	SNP	C2orf47	NM_024520	human	genbank	57_37b	+1	validated	missense	c.363	p.W121C	1.000	NULL	NULL	-	no_errors	
CD226	10666	genome.wustl.edu	37	18	67562982	67562982	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	67562982	67562982	C	T	SNP	CD226	NM_006566	human	genbank	57_37b	-1	reviewed	missense	c.682	p.A228T	0.002	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGc2	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGc2	-	no_errors	
CDH18	1016	genome.wustl.edu	37	5	19483502	19483502	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	19483502	19483502	A	C	SNP	CDH18	NM_004934	human	genbank	57_37b	-1	reviewed	missense	c.1790	p.V597G	1.000	superfamily_Cadherin	superfamily_Cadherin,HMMSmart_CA,HMMPfam_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CGN	57530	genome.wustl.edu	37	1	151509266	151509266	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151509266	151509266	C	T	SNP	CGN	NM_020770	human	genbank	57_37b	+1	validated	nonsense	c.3367	p.R1123*	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_tail_1	-	no_errors	
CHD4	1108	genome.wustl.edu	37	12	6697539	6697539	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6697539	6697539	G	A	SNP	CHD4	NM_001273	human	genbank	57_37b	-1	reviewed	silent	c.3390	p.G1130	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	HMMPfam_CHDNT,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00298,superfamily_Chromo domain-like,PatternScan_CHROMO_1,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_DUF1087,HMMPfam_DUF1086,HMMPfam_CHDCT2	-	no_errors	
CNOT3	4849	genome.wustl.edu	37	19	54652203	54652203	+	Missense_Mutation	SNP	T	T	C	rs43211	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54652203	54652203	T	C	SNP	CNOT3	ENST00000440571	human	ensembl	57_37b	+1	known	missense	c.980	p.V327A	0.000	NULL	HMMPfam_Not3	-		
CXorf66	347487	genome.wustl.edu	37	X	139038667	139038667	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	139038667	139038667	T	C	SNP	CXorf66	NM_001013403	human	genbank	57_37b	-1	validated	silent	c.474	p.P158	0.000	NULL	NULL	-	no_errors	
DCAF11	80344	genome.wustl.edu	37	14	24586486	24586486	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24586486	24586486	C	T	SNP	DCAF11	NM_025230	human	genbank	57_37b	+1	reviewed	missense	c.295	p.P99S	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors	
EIF2B4	8890	genome.wustl.edu	37	2	27591877	27591877	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27591877	27591877	G	A	SNP	EIF2B4	NM_172195	human	genbank	57_37b	-1	reviewed	silent	c.474	p.P158	0.941	NULL	superfamily_NagB/RpiA/CoA transferase-like,HMMPfam_IF-2B	-	no_errors	
ENSG00000180923	0	genome.wustl.edu	37	11	6078962	6078962	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6078962	6078962	G	A	SNP	ENSG00000180923	ENST00000316540	human	ensembl	57_37b	-1	known	nonsense	c.544	p.R182*	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
ENSG00000246367	0	genome.wustl.edu	37	7	64465502	64465502	+	RNA	SNP	G	G	A	rs7806567	byCluster;byFrequency;by1000genomes	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	64465502	64465502	G	A	SNP	ENSG00000246367	ENST00000501303	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.004	-	-	-		
ENSG00000246542	0	genome.wustl.edu	37	7	48005250	48005250	+	RNA	SNP	A	A	G	rs2037484	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	48005250	48005250	A	G	SNP	ENSG00000246542	ENST00000499823	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-		
FILIP1L	11259	genome.wustl.edu	37	3	99567698	99567698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	99567698	99567698	G	A	SNP	FILIP1L	NM_182909	human	genbank	57_37b	-1	validated	missense	c.2822	p.T941M	0.997	NULL	HMMPfam_CortBP2,superfamily_Prefoldin	-	no_errors	
GEMIN5	25929	genome.wustl.edu	37	5	154282237	154282237	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	154282237	154282237	C	A	SNP	GEMIN5	NM_015465	human	genbank	57_37b	-1	validated	splice_site	c.2729-1	e20-1	1.000	-	-	-	no_errors	
GORAB	92344	genome.wustl.edu	37	1	170521254	170521254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	170521254	170521254	C	T	SNP	GORAB	NM_152281	human	genbank	57_37b	+1	reviewed	missense	c.836	p.T279M	1.000	NULL	NULL	-	no_errors	
HCN2	610	genome.wustl.edu	37	19	615906	615908	+	In_Frame_Del	DEL	TGG	TGG	-	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	TGG	TGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	615906	615908	TGG	-	DEL	HCN2	NM_001194	human	genbank	57_37b	+1	validated	in_frame_del	c.2102_2104	p.V702in_frame_del	1.000:1.000:1.000	NULL	PatternScan_CNMP_BINDING_2,HMMPfam_Ion_trans_N,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1	(deletion:cds_exon[615795,616474])	no_errors	
HECW2	57520	genome.wustl.edu	37	2	197080599	197080599	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	197080599	197080599	C	A	SNP	HECW2	NM_020760	human	genbank	57_37b	-1	provisional	missense	c.4597	p.A1533S	0.980	superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	HMMSmart_SM00239,HMMPfam_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
HTR2A	3356	genome.wustl.edu	37	13	47466593	47466593	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	47466593	47466593	T	C	SNP	HTR2A	NM_000621	human	genbank	57_37b	-1	reviewed	missense	c.545	p.H182R	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
LILRA2	11027	genome.wustl.edu	37	19	55086420	55086420	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55086420	55086420	C	T	SNP	LILRA2	NM_001130917	human	genbank	57_37b	+1	validated	missense	c.575	p.S192L	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
MAMDC2	256691	genome.wustl.edu	37	9	72723399	72723399	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	72723399	72723399	G	T	SNP	MAMDC2	NM_153267	human	genbank	57_37b	+1	validated	splice_site	c.420+1	e3+1	1.000	-	-	-	no_errors	
MMP16	4325	genome.wustl.edu	37	8	89086840	89086840	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	89086840	89086840	G	T	SNP	MMP16	NM_005941	human	genbank	57_37b	-1	reviewed	missense	c.1215	p.F405L	1.000	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120	"superfamily_PGBD-like,HMMPfam_PG_binding_1,PatternScan_CYSTEINE_SWITCH,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M10,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120,PatternScan_HEMOPEXIN"	-	no_errors	
MYH11	4629	genome.wustl.edu	37	16	15853452	15853452	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15853452	15853452	G	T	SNP	MYH11	NM_001040114	human	genbank	57_37b	-1	reviewed	missense	c.1403	p.A468D	1.000	superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
NSD1	64324	genome.wustl.edu	37	5	176721812	176721812	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176721812	176721812	G	A	SNP	NSD1	NM_022455	human	genbank	57_37b	+1	reviewed	silent	c.7443	p.E2481	0.991	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
NUP160	23279	genome.wustl.edu	37	11	47861966	47861966	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47861966	47861966	C	A	SNP	NUP160	NM_015231	human	genbank	57_37b	-1	validated	missense	c.489	p.R163S	0.004	NULL	PatternScan_HIS_ACID_PHOSPHAT_1	-	no_errors	
ODZ1	10178	genome.wustl.edu	37	X	123615597	123615597	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	123615597	123615597	G	A	SNP	ODZ1	NM_014253	human	genbank	57_37b	-1	reviewed	silent	c.3913	p.L1305	0.972	superfamily_SSF101898	HMMPfam_Ten_N,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_SSF57196,superfamily_SSF101898,HMMPfam_NHL,superfamily_N2O_reductase_N,HMMPfam_RHS_repeat	-	no_errors	
OR2L5	0	genome.wustl.edu	37	1	248185375	248185375	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248185375	248185375	A	G	SNP	OR2L5	ENST00000355281	human	ensembl	57_37b	+1	known	silent	c.126	p.L42	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR4C16	219428	genome.wustl.edu	37	11	55340113	55340113	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55340113	55340113	T	A	SNP	OR4C16	NM_001004701	human	genbank	57_37b	+1	validated	missense	c.510	p.N170K	0.998	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OSBPL7	114881	genome.wustl.edu	37	17	45895952	45895952	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	45895952	45895952	C	T	SNP	OSBPL7	NM_145798	human	genbank	57_37b	-1	reviewed	missense	c.400	p.V134M	1.000	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729,HMMPfam_Oxysterol_BP,PatternScan_OSBP	-	no_errors	
PCDHA4	56144	genome.wustl.edu	37	5	140187582	140187582	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140187582	140187582	C	T	SNP	PCDHA4	NM_018907	human	genbank	57_37b	+1	reviewed	silent	c.810	p.D270	0.989	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PKLR	5313	genome.wustl.edu	37	1	155265012	155265012	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155265012	155265012	C	T	SNP	PKLR	NM_000298	human	genbank	57_37b	-1	reviewed	missense	c.589	p.A197T	0.995	superfamily_Phosphoenolpyruvate/pyruvate domain,HMMPfam_PK,superfamily_PK beta-barrel domain-like	superfamily_Phosphoenolpyruvate/pyruvate domain,HMMPfam_PK,superfamily_PK beta-barrel domain-like,PatternScan_PYRUVATE_KINASE,superfamily_PK C-terminal domain-like,HMMPfam_PK_C	-	no_errors	
PKP2	5318	genome.wustl.edu	37	12	32955486	32955486	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	32955486	32955486	G	A	SNP	PKP2	NM_004572	human	genbank	57_37b	-1	reviewed	missense	c.2150	p.P717L	0.993	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors	
PNPLA5	150379	genome.wustl.edu	37	22	44287062	44287062	+	Silent	SNP	A	G	G	rs2071884	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	44287062	44287062	A	G	SNP	PNPLA5	NM_138814	human	genbank	57_37b	-1	provisional	silent	c.306	p.D102	0.000	superfamily_FabD/lysophospholipase-like,HMMPfam_Patatin	superfamily_FabD/lysophospholipase-like,HMMPfam_Patatin	-		
PPIP5K2	0	genome.wustl.edu	37	5	102502945	102502945	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	102502945	102502945	G	A	SNP	PPIP5K2	NM_015216	human	genbank	57_37b	+1	provisional	silent	c.1983	p.K661	1.000	superfamily_SSF53254,HMMPfam_Acid_phosphat_A	superfamily_SSF56059,superfamily_SSF53254,HMMPfam_Acid_phosphat_A,PatternScan_HIS_ACID_PHOSPHAT_1	-	no_errors	
QPCTL	54814	genome.wustl.edu	37	19	46206220	46206220	+	Silent	SNP	G	G	A	rs112197334	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	46206220	46206220	G	A	SNP	QPCTL	NM_017659	human	genbank	57_37b	+1	validated	silent	c.1062	p.A354	0.000	superfamily_SSF53187,HMMPfam_Peptidase_M28	superfamily_SSF53187,HMMPfam_Peptidase_M28	-		
RBM8A	9939	genome.wustl.edu	37	1	145507682	145507682	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145507682	145507682	G	A	SNP	RBM8A	NM_005105	human	genbank	57_37b	+1	reviewed	missense	c.16	p.D6N	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
REG1A	5967	genome.wustl.edu	37	2	79349250	79349250	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	79349250	79349250	A	C	SNP	REG1A	NM_002909	human	genbank	57_37b	+1	reviewed	missense	c.320	p.K107T	0.953	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors	
RICTOR	253260	genome.wustl.edu	37	5	39002728	39002728	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	39002728	39002728	C	T	SNP	RICTOR	NM_152756	human	genbank	57_37b	-1	validated	missense	c.301	p.A101T	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_RasGEF_N	-	no_errors	
SAFB2	9667	genome.wustl.edu	37	19	5587936	5587936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5587936	5587936	C	T	SNP	SAFB2	NM_014649	human	genbank	57_37b	-1	validated	missense	c.2581	p.A861T	0.000	NULL	superfamily_SSF68906,HMMPfam_SAP,HMMSmart_SAP,superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors	
SAGE1	55511	genome.wustl.edu	37	X	134990730	134990730	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	134990730	134990730	T	G	SNP	SAGE1	NM_018666	human	genbank	57_37b	+1	reviewed	missense	c.1395	p.I465M	0.005	NULL	NULL	-	no_errors	
SERPINI1	5274	genome.wustl.edu	37	3	167510446	167510446	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	167510446	167510446	G	T	SNP	SERPINI1	NM_001122752	human	genbank	57_37b	+1	reviewed	missense	c.550	p.V184F	0.998	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors	
SF3B1	23451	genome.wustl.edu	37	2	198266542	198266542	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	198266542	198266542	T	C	SNP	SF3B1	NM_012433	human	genbank	57_37b	-1	reviewed	missense	c.2294	p.Y765C	1.000	superfamily_ARM repeat	HMMPfam_SF3b1,superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
SLC38A9	153129	genome.wustl.edu	37	5	54931405	54931405	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54931405	54931405	A	G	SNP	SLC38A9	NM_173514	human	genbank	57_37b	-1	validated	silent	c.1248	p.P416	0.901	NULL	HMMPfam_Aa_trans	-	no_errors	
SLC4A1AP	22950	genome.wustl.edu	37	2	27910885	27910885	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27910885	27910885	C	A	SNP	SLC4A1AP	NM_018158	human	genbank	57_37b	+1	validated	nonsense	c.2201	p.S734*	1.000	NULL	superfamily_SMAD_FHA,HMMSmart_FHA,HMMPfam_FHA,HMMPfam_dsrm,HMMSmart_DSRM	-	no_errors	
SLC9A7	84679	genome.wustl.edu	37	X	46491044	46491044	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	46491044	46491044	C	T	SNP	SLC9A7	NM_032591	human	genbank	57_37b	-1	reviewed	missense	c.1714	p.D572N	1.000	NULL	HMMPfam_Na_H_Exchanger	-	no_errors	
STYXL1	51657	genome.wustl.edu	37	7	75630222	75630222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	75630222	75630222	C	T	SNP	STYXL1	NM_016086	human	genbank	57_37b	-1	validated	missense	c.796	p.E266K	0.006	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195	superfamily_Rhodanese/Cell cycle control phosphatase,HMMSmart_SM00450,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195	-	no_errors	
TBC1D5	9779	genome.wustl.edu	37	3	17415993	17415993	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	17415993	17415993	C	T	SNP	TBC1D5	NM_001134381	human	genbank	57_37b	-1	validated	nonsense	c.792	p.W264*	1.000	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMSmart_SM00164,HMMPfam_TBC	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMSmart_SM00164,HMMPfam_TBC	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7577547	7577547	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577547	7577547	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.734	p.G245D	1.000	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRAPPC10	7109	genome.wustl.edu	37	21	45513998	45513998	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	45513998	45513998	G	A	SNP	TRAPPC10	NM_003274	human	genbank	57_37b	+1	reviewed	missense	c.3052	p.E1018K	0.992	NULL	PatternScan_AA_TRNA_LIGASE_I	-	no_errors	
TSPAN8	7103	genome.wustl.edu	37	12	71519153	71519153	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	71519153	71519153	C	T	SNP	TSPAN8	NM_004616	human	genbank	57_37b	-1	reviewed	silent	c.675	p.V225	0.998	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	-	no_errors	
UBD	10537	genome.wustl.edu	37	6	29523762	29523762	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29523762	29523762	A	G	SNP	UBD	NM_006398	human	genbank	57_37b	-1	validated	silent	c.393	p.I131	0.182	HMMSmart_SM00213,HMMPfam_ubiquitin,superfamily_Ubiquitin-like	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin	-	no_errors	
ZFHX4	79776	genome.wustl.edu	37	8	77767190	77767190	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	77767190	77767190	C	T	SNP	ZFHX4	NM_024721	human	genbank	57_37b	+1	validated	missense	c.7898	p.P2633L	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_SM00355,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,HMMSmart_SM00451,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
ZNF280C	55609	genome.wustl.edu	37	X	129349834	129349834	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	129349834	129349834	T	C	SNP	ZNF280C	NM_017666	human	genbank	57_37b	-1	validated	missense	c.1769	p.K590R	0.069	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF702P	79986	genome.wustl.edu	37	19	53472089	53472089	+	RNA	SNP	A	A	T	rs8100382	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0HY-01	TCGA-BH-A0HY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53472089	53472089	A	T	SNP	ZNF702P	NR_003578	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.001	-	-	-		
