Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABHD11	83451	hgsc.bcm.edu	37	7	73153111	73153111	+	Missense_Mutation	SNP	T	T	C	rs111275772	unknown	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ADCY8	114	hgsc.bcm.edu	37	8	131916200	131916200	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AGXT2	64902	hgsc.bcm.edu	37	5	35025932	35025932	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ALDH5A1	7915	hgsc.bcm.edu	37	6	24520670	24520670	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AMDHD1	144193	hgsc.bcm.edu	37	12	96350642	96350642	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ANK1	286	hgsc.bcm.edu	37	8	41577248	41577248	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ANKRD27	84079	hgsc.bcm.edu	37	19	33119747	33119747	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ANPEP	290	hgsc.bcm.edu	37	15	90342493	90342493	+	Silent	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AOC2	314	hgsc.bcm.edu	37	17	40997960	40997960	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AURKB	9212	hgsc.bcm.edu	37	17	8110133	8110133	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
B3GNT8	374907	hgsc.bcm.edu	37	19	41932611	41932611	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C1orf110	339512	hgsc.bcm.edu	37	1	162829286	162829286	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C20orf43	51507	hgsc.bcm.edu	37	20	55088389	55088389	+	Nonsense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C8B	732	hgsc.bcm.edu	37	1	57395209	57395209	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C9orf125	84302	hgsc.bcm.edu	37	9	104239229	104239229	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CACNB1	782	hgsc.bcm.edu	37	17	37347804	37347804	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CLDN2	9075	hgsc.bcm.edu	37	X	106171559	106171559	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CMBL	134147	hgsc.bcm.edu	37	5	10290761	10290761	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CUBN	8029	hgsc.bcm.edu	37	10	17126413	17126413	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CYP4B1	1580	hgsc.bcm.edu	37	1	47284326	47284326	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DLGAP1	9229	hgsc.bcm.edu	37	18	3742493	3742493	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ENC1	8507	hgsc.bcm.edu	37	5	73930904	73930904	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ENO2	2026	hgsc.bcm.edu	37	12	7031310	7031310	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EXOSC10	5394	hgsc.bcm.edu	37	1	11159823	11159823	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM188A	80013	hgsc.bcm.edu	37	10	15880262	15880262	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FASTK	10922	hgsc.bcm.edu	37	7	150773915	150773915	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FBN1	2200	hgsc.bcm.edu	37	15	48787391	48787391	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FBN2	2201	hgsc.bcm.edu	37	5	127712442	127712442	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GEFT	115557	hgsc.bcm.edu	37	12	58008143	58008143	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GIMAP2	26157	hgsc.bcm.edu	37	7	150390179	150390179	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GIT1	28964	hgsc.bcm.edu	37	17	27902652	27902652	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GPRIN1	114787	hgsc.bcm.edu	37	5	176024673	176024673	+	Silent	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HGC6.3	100128124	hgsc.bcm.edu	37	6	168376831	168376832	+	Frame_Shift_Del	DEL	GT	GT	-	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IQGAP1	8826	hgsc.bcm.edu	37	15	90991847	90991847	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIAA0754	643314	hgsc.bcm.edu	37	1	39876896	39876896	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KRT71	112802	hgsc.bcm.edu	37	12	52946779	52946779	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LAT2	7462	hgsc.bcm.edu	37	7	73638987	73638987	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MATN2	4147	hgsc.bcm.edu	37	8	99030307	99030307	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MUC17	140453	hgsc.bcm.edu	37	7	100682613	100682613	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYLK4	340156	hgsc.bcm.edu	37	6	2685575	2685575	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYO7A	4647	hgsc.bcm.edu	37	11	76873961	76873961	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
OR6N1	128372	hgsc.bcm.edu	37	1	158735945	158735945	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PABPC1	26986	hgsc.bcm.edu	37	8	101727766	101727766	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PDE4DIP	9659	hgsc.bcm.edu	37	1	144871742	144871742	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PID1	55022	hgsc.bcm.edu	37	2	229890657	229890657	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLIN1	5346	hgsc.bcm.edu	37	15	90210173	90210173	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PNRC1	10957	hgsc.bcm.edu	37	6	89793882	89793882	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PREP	5550	hgsc.bcm.edu	37	6	105729690	105729690	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RBM15	64783	hgsc.bcm.edu	37	1	110882645	110882645	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RPGRIP1	57096	hgsc.bcm.edu	37	14	21771501	21771501	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SBF1	6305	hgsc.bcm.edu	37	22	50904777	50904777	+	Splice_Site	SNP	A	A	C	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLC3A1	6519	hgsc.bcm.edu	37	2	44508564	44508564	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SON	6651	hgsc.bcm.edu	37	21	34926967	34926967	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SP110	3431	hgsc.bcm.edu	37	2	231033926	231033926	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPAG1	6674	hgsc.bcm.edu	37	8	101237526	101237526	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPRR2A	6700	hgsc.bcm.edu	37	1	153029010	153029010	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPTBN2	6712	hgsc.bcm.edu	37	11	66481623	66481623	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SSR4	6748	hgsc.bcm.edu	37	X	153063555	153063555	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
STARD7	56910	hgsc.bcm.edu	37	2	96860708	96860708	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SUPT5H	6829	hgsc.bcm.edu	37	19	39936543	39936543	+	Nonsense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
THOC3	84321	hgsc.bcm.edu	37	5	175392006	175392006	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TTLL11	158135	hgsc.bcm.edu	37	9	124794125	124794125	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
WDR13	64743	hgsc.bcm.edu	37	X	48456398	48456398	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZBTB37	84614	hgsc.bcm.edu	37	1	173839525	173839525	+	Silent	SNP	C	C	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF329	79673	hgsc.bcm.edu	37	19	58640489	58640489	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF454	285676	hgsc.bcm.edu	37	5	178373911	178373911	+	Silent	SNP	C	C	G	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF623	9831	hgsc.bcm.edu	37	8	144732667	144732667	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4165-01	TCGA-BP-4165-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
