Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADAMTS16	170690	hgsc.bcm.edu	37	5	5187899	5187899	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AHR	196	hgsc.bcm.edu	37	7	17382681	17382681	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AMPD3	272	hgsc.bcm.edu	37	11	10516458	10516458	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AOX1	316	hgsc.bcm.edu	37	2	201488671	201488671	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ARID2	196528	hgsc.bcm.edu	37	12	46230714	46230714	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BIRC2	329	hgsc.bcm.edu	37	11	102221130	102221130	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C4orf14	84273	hgsc.bcm.edu	37	4	57834621	57834621	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CFTR	1080	hgsc.bcm.edu	37	7	117170982	117170982	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CGRRF1	10668	hgsc.bcm.edu	37	14	54996813	54996813	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CLDN2	9075	hgsc.bcm.edu	37	X	106171625	106171625	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
COL16A1	1307	hgsc.bcm.edu	37	1	32146505	32146505	+	Splice_Site	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CSMD3	114788	hgsc.bcm.edu	37	8	113326746	113326746	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DACH1	1602	hgsc.bcm.edu	37	13	72049972	72049972	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GET4	51608	hgsc.bcm.edu	37	7	925701	925701	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GPR172B	55065	hgsc.bcm.edu	37	17	4937083	4937083	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HERPUD2	64224	hgsc.bcm.edu	37	7	35712843	35712843	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HTATSF1	27336	hgsc.bcm.edu	37	X	135581831	135581831	+	Silent	SNP	A	A	C	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIAA0319	9856	hgsc.bcm.edu	37	6	24547461	24547461	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIF20B	9585	hgsc.bcm.edu	37	10	91532538	91532538	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIRREL	55243	hgsc.bcm.edu	37	1	158054231	158054231	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRRK1	79705	hgsc.bcm.edu	37	15	101593220	101593220	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MPO	4353	hgsc.bcm.edu	37	17	56350802	56350802	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MTMR15	22909	hgsc.bcm.edu	37	15	31221493	31221493	+	Missense_Mutation	SNP	C	C	T	rs80120912	unknown	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ODF1	4956	hgsc.bcm.edu	37	8	103573037	103573037	+	Silent	SNP	G	G	C	rs62523273	unknown	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PXDN	7837	hgsc.bcm.edu	37	2	1667443	1667443	+	Nonsense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
REV3L	5980	hgsc.bcm.edu	37	6	111711296	111711296	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RUNX1T1	862	hgsc.bcm.edu	37	8	93027007	93027007	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SIGLEC12	89858	hgsc.bcm.edu	37	19	52000158	52000158	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPOCK3	50859	hgsc.bcm.edu	37	4	167921539	167921539	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SULT1B1	27284	hgsc.bcm.edu	37	4	70599939	70599939	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMEM229B	161145	hgsc.bcm.edu	37	14	67940219	67940219	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TRIM42	287015	hgsc.bcm.edu	37	3	140407023	140407023	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TUBGCP2	10844	hgsc.bcm.edu	37	10	135102393	135102393	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
UBASH3B	84959	hgsc.bcm.edu	37	11	122665475	122665475	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
VHL	7428	hgsc.bcm.edu	37	3	10191479	10191479	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
WDR85	92715	hgsc.bcm.edu	37	9	140449899	140449899	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZBTB8B	728116	hgsc.bcm.edu	37	1	32936276	32936276	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF300	91975	hgsc.bcm.edu	37	5	150276155	150276155	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZPBP2	124626	hgsc.bcm.edu	37	17	38032946	38032946	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4170-01	TCGA-BP-4170-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
