Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCB6	10058	hgsc.bcm.edu	37	2	220075156	220075156	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AHNAK	79026	hgsc.bcm.edu	37	11	62287670	62287670	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
APC	324	hgsc.bcm.edu	37	5	112175423	112175423	+	Nonsense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ARHGAP1	392	hgsc.bcm.edu	37	11	46717596	46717596	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C1orf63	57035	hgsc.bcm.edu	37	1	25569164	25569164	+	Silent	SNP	A	A	C	novel	unknown	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C9orf96	169436	hgsc.bcm.edu	37	9	136268038	136268038	+	Silent	SNP	C	C	T	rs3124748	unknown	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CDCA7	83879	hgsc.bcm.edu	37	2	174223501	174223501	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CRMP1	1400	hgsc.bcm.edu	37	4	5827342	5827342	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DLEC1	9940	hgsc.bcm.edu	37	3	38138227	38138227	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNAJC15	29103	hgsc.bcm.edu	37	13	43652746	43652746	+	Splice_Site	SNP	A	A	G	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DOCK10	55619	hgsc.bcm.edu	37	2	225761077	225761077	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAAH2	158584	hgsc.bcm.edu	37	X	57337126	57337126	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FGB	2244	hgsc.bcm.edu	37	4	155487151	155487151	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FNIP1	96459	hgsc.bcm.edu	37	5	131039810	131039810	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GLG1	2734	hgsc.bcm.edu	37	16	74496488	74496488	+	Silent	SNP	A	A	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HFM1	164045	hgsc.bcm.edu	37	1	91726880	91726880	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IDH3G	3421	hgsc.bcm.edu	37	X	153055662	153055662	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KCNAB3	9196	hgsc.bcm.edu	37	17	7827771	7827771	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIAA1217	56243	hgsc.bcm.edu	37	10	24832825	24832825	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRP12	29967	hgsc.bcm.edu	37	8	105503566	105503566	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRP6	4040	hgsc.bcm.edu	37	12	12311809	12311809	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYF6	4618	hgsc.bcm.edu	37	12	81101767	81101767	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NXF2B	728343	hgsc.bcm.edu	37	X	101615546	101615546	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ODF2L	57489	hgsc.bcm.edu	37	1	86851139	86851139	+	Splice_Site	SNP	A	A	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
OR10H1	26539	hgsc.bcm.edu	37	19	15918527	15918527	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PBRM1	55193	hgsc.bcm.edu	37	3	52651292	52651292	+	Nonsense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLXNA3	55558	hgsc.bcm.edu	37	X	153699461	153699461	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PROK2	60675	hgsc.bcm.edu	37	3	71830711	71830711	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PRTG	283659	hgsc.bcm.edu	37	15	55912369	55912369	+	Silent	SNP	T	T	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RB1	5925	hgsc.bcm.edu	37	13	48955552	48955552	+	Silent	SNP	A	A	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SETD2	29072	hgsc.bcm.edu	37	3	47144909	47144909	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SNAPC1	6617	hgsc.bcm.edu	37	14	62234060	62234060	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SSTR1	6751	hgsc.bcm.edu	37	14	38679408	38679409	+	Frame_Shift_Ins	INS	-	-	TG	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TEX2	55852	hgsc.bcm.edu	37	17	62290991	62290991	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TRIML2	205860	hgsc.bcm.edu	37	4	189026066	189026066	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF554	115196	hgsc.bcm.edu	37	19	2833757	2833757	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4774-01	TCGA-BP-4774-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
