Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACCN2	41	hgsc.bcm.edu	37	12	50472709	50472709	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ACPL2	92370	hgsc.bcm.edu	37	3	141011927	141011927	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ATF5	22809	hgsc.bcm.edu	37	19	50435817	50435817	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BBS7	55212	hgsc.bcm.edu	37	4	122776665	122776665	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BTN1A1	696	hgsc.bcm.edu	37	6	26505216	26505216	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CNTROB	116840	hgsc.bcm.edu	37	17	7839782	7839782	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CTCF	10664	hgsc.bcm.edu	37	16	67644949	67644949	+	Nonsense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DCN	1634	hgsc.bcm.edu	37	12	91572254	91572254	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ELL3	80237	hgsc.bcm.edu	37	15	44067734	44067734	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EP400	57634	hgsc.bcm.edu	37	12	132471271	132471271	+	Silent	SNP	C	C	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EXO1	9156	hgsc.bcm.edu	37	1	242030291	242030291	+	Nonsense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM200A	221786	hgsc.bcm.edu	37	7	99144481	99144481	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM55A	120400	hgsc.bcm.edu	37	11	114401131	114401131	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FGR	2268	hgsc.bcm.edu	37	1	27941092	27941092	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GBA2	57704	hgsc.bcm.edu	37	9	35748456	35748456	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GGNBP2	79893	hgsc.bcm.edu	37	17	34945653	34945653	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GLS	2744	hgsc.bcm.edu	37	2	191796274	191796274	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HELLS	3070	hgsc.bcm.edu	37	10	96354517	96354517	+	Silent	SNP	T	T	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HSPB2	3316	hgsc.bcm.edu	37	11	111784450	111784450	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ITGA1	3672	hgsc.bcm.edu	37	5	52206160	52206160	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIAA0748	9840	hgsc.bcm.edu	37	12	55356980	55356980	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KIAA1430	57587	hgsc.bcm.edu	37	4	186096970	186096970	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KRT80	144501	hgsc.bcm.edu	37	12	52565297	52565297	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
N6AMT2	221143	hgsc.bcm.edu	37	13	21306082	21306082	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NANS	54187	hgsc.bcm.edu	37	9	100845161	100845161	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NCAPD3	23310	hgsc.bcm.edu	37	11	134046230	134046230	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NF1	4763	hgsc.bcm.edu	37	17	29654553	29654553	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NIPA1	123606	hgsc.bcm.edu	37	15	23049093	23049095	+	In_Frame_Del	DEL	GAT	GAT	-	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	GAT	GAT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NLRP14	338323	hgsc.bcm.edu	37	11	7064163	7064163	+	Silent	SNP	C	C	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PCNT	5116	hgsc.bcm.edu	37	21	47832897	47832897	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PDE8A	5151	hgsc.bcm.edu	37	15	85643406	85643406	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLEKHH2	130271	hgsc.bcm.edu	37	2	43973017	43973017	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RGL1	23179	hgsc.bcm.edu	37	1	183895346	183895346	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SEMA4B	10509	hgsc.bcm.edu	37	15	90768609	90768609	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLC16A3	9123	hgsc.bcm.edu	37	17	80195666	80195666	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SNX24	28966	hgsc.bcm.edu	37	5	122335673	122335673	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
STRA6	64220	hgsc.bcm.edu	37	15	74483211	74483211	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMEM200A	114801	hgsc.bcm.edu	37	6	130762739	130762739	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TNS1	7145	hgsc.bcm.edu	37	2	218686541	218686541	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TRANK1	9881	hgsc.bcm.edu	37	3	36871105	36871108	+	Frame_Shift_Del	DEL	CTGA	CTGA	-	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	CTGA	CTGA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TRPM1	4308	hgsc.bcm.edu	37	15	31295002	31295002	+	Nonsense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TTN	7273	hgsc.bcm.edu	37	2	179399891	179399891	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF131	7690	hgsc.bcm.edu	37	5	43175076	43175076	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4775-01	TCGA-BP-4775-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
