Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADAMTS13	11093	broad.mit.edu	37	9	136313849	136313849	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117139683	117139683	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38429478	38429478	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148861022	148861022	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASB16	92591	broad.mit.edu	37	17	42249679	42249679	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATG2A	23130	broad.mit.edu	37	11	64676580	64676580	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110783864	110783864	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32906553	32906553	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRD1	23774	broad.mit.edu	37	22	50191673	50191673	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C14orf174	161394	broad.mit.edu	37	14	77844922	77844922	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CECR1	51816	broad.mit.edu	37	22	17672628	17672628	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COPE	11316	broad.mit.edu	37	19	19014155	19014155	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRYGS	1427	broad.mit.edu	37	3	186256604	186256604	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	304680	304680	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117332278	117332278	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56500387	56500387	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EDEM2	55741	broad.mit.edu	37	20	33703674	33703674	+	Silent	SNP	A	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139165076	139165076	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067930	190067930	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FES	2242	broad.mit.edu	37	15	91430480	91430480	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FHL5	9457	broad.mit.edu	37	6	97063550	97063550	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
G6PD	2539	broad.mit.edu	37	X	153762612	153762612	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171686107	171686107	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19883415	19883415	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIST1H2AH	85235	broad.mit.edu	37	6	27115055	27115055	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HTR7	3363	broad.mit.edu	37	10	92617162	92617162	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27460474	27460474	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IWS1	55677	broad.mit.edu	37	2	128262532	128262533	+	Missense_Mutation	DNP	TC	AA	AA	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	TC	TC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869596	36869596	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMAN1	3998	broad.mit.edu	37	18	57013225	57013225	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC42	115353	broad.mit.edu	37	1	54433413	54433413	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIS12	79003	broad.mit.edu	37	17	5392574	5392574	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MRGPRD	116512	broad.mit.edu	37	11	68747868	68747868	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFXL1	152518	broad.mit.edu	37	4	47880552	47880552	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OSBPL7	114881	broad.mit.edu	37	17	45891939	45891939	+	Silent	SNP	G	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78601100	78601100	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLTP	5360	broad.mit.edu	37	20	44534935	44534935	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3659255	3659255	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43415010	43415010	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120720267	120720267	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	71029653	71029653	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAB40B	10966	broad.mit.edu	37	17	80622419	80622419	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RGS18	64407	broad.mit.edu	37	1	192150572	192150572	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SHF	90525	broad.mit.edu	37	15	45470431	45470431	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPRED1	161742	broad.mit.edu	37	15	38591664	38591664	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STIL	6491	broad.mit.edu	37	1	47725984	47725984	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33411625	33411625	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRAF3IP1	26146	broad.mit.edu	37	2	239233980	239233980	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSPY3	728137	broad.mit.edu	37	Y	9366667	9366672	+	In_Frame_Del	DEL	GAAGAT	-	-	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	GAAGAT	GAAGAT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSR1	55720	broad.mit.edu	37	17	2238674	2238674	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUBA4A	7277	broad.mit.edu	37	2	220115231	220115231	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68547886	68547886	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WTAP	9589	broad.mit.edu	37	6	160174528	160174528	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF146	7705	broad.mit.edu	37	19	36728127	36728127	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4801-01	TCGA-BP-4801-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
