Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AMPD3	272	hgsc.bcm.edu	37	11	10517135	10517135	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ATP8B3	148229	hgsc.bcm.edu	37	19	1783237	1783239	+	In_Frame_Del	DEL	CTC	CTC	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	CTC	CTC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
C11orf82	220042	hgsc.bcm.edu	37	11	82625795	82625795	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CARD8	22900	hgsc.bcm.edu	37	19	48735017	48735018	+	Frame_Shift_Ins	INS	-	-	TT	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CLTC	1213	hgsc.bcm.edu	37	17	57763101	57763101	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CNBD1	168975	hgsc.bcm.edu	37	8	88297032	88297032	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
COL11A1	1301	hgsc.bcm.edu	37	1	103496778	103496778	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
COL25A1	84570	hgsc.bcm.edu	37	4	109810856	109810856	+	Splice_Site	SNP	C	C	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CTNNA3	29119	hgsc.bcm.edu	37	10	67726369	67726369	+	Splice_Site	SNP	C	C	A	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DAGLB	221955	hgsc.bcm.edu	37	7	6474529	6474529	+	Nonsense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DCN	1634	hgsc.bcm.edu	37	12	91550907	91550907	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNAH11	8701	hgsc.bcm.edu	37	7	21784607	21784607	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DPYSL2	1808	hgsc.bcm.edu	37	8	26505237	26505238	+	Frame_Shift_Ins	INS	-	-	TA	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DYNC1H1	1778	hgsc.bcm.edu	37	14	102516872	102516872	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EIF2AK3	9451	hgsc.bcm.edu	37	2	88874521	88874521	+	Nonsense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FBN1	2200	hgsc.bcm.edu	37	15	48780624	48780624	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FMN1	342184	hgsc.bcm.edu	37	15	33261563	33261563	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IL27RA	9466	hgsc.bcm.edu	37	19	14157032	14157032	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IMPDH2	3615	hgsc.bcm.edu	37	3	49065754	49065754	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ITGB5	3693	hgsc.bcm.edu	37	3	124482495	124482503	+	In_Frame_Del	DEL	TTGTTGAAC	TTGTTGAAC	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	TTGTTGAAC	TTGTTGAAC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LAMP2	3920	hgsc.bcm.edu	37	X	119562465	119562465	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LATS1	9113	hgsc.bcm.edu	37	6	150001249	150001249	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRRC45	201255	hgsc.bcm.edu	37	17	79986136	79986136	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRRK2	120892	hgsc.bcm.edu	37	12	40651101	40651101	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MAP3K6	9064	hgsc.bcm.edu	37	1	27683230	27683232	+	In_Frame_Del	DEL	CTT	CTT	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	CTT	CTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MAP4K5	11183	hgsc.bcm.edu	37	14	50943023	50943023	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MRPL50	54534	hgsc.bcm.edu	37	9	104152751	104152752	+	Frame_Shift_Ins	INS	-	-	TA	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MTHFSD	64779	hgsc.bcm.edu	37	16	86575780	86575780	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MTMR12	54545	hgsc.bcm.edu	37	5	32268894	32268894	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NLRP11	204801	hgsc.bcm.edu	37	19	56320980	56320980	+	Silent	SNP	G	G	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
OR5T1	390155	hgsc.bcm.edu	37	11	56043250	56043253	+	Frame_Shift_Del	DEL	ATCT	ATCT	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	ATCT	ATCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PARP8	79668	hgsc.bcm.edu	37	5	50093025	50093025	+	Silent	SNP	T	T	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RBBP5	5929	hgsc.bcm.edu	37	1	205084072	205084072	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RBM14	10432	hgsc.bcm.edu	37	11	66392311	66392312	+	Frame_Shift_Del	DEL	GC	GC	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	GC	GC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
RNF135	84282	hgsc.bcm.edu	37	17	29311739	29311739	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SCAMP2	10066	hgsc.bcm.edu	37	15	75143007	75143007	+	Silent	SNP	T	T	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SEPHS2	22928	hgsc.bcm.edu	37	16	30456532	30456532	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SIRPA	140885	hgsc.bcm.edu	37	20	1896052	1896054	+	In_Frame_Del	DEL	CGA	CGA	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	CGA	CGA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SON	6651	hgsc.bcm.edu	37	21	34929511	34929511	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPAG5	10615	hgsc.bcm.edu	37	17	26911463	26911463	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
THBS1	7057	hgsc.bcm.edu	37	15	39887564	39887564	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMCO7	79613	hgsc.bcm.edu	37	16	68893912	68893912	+	Silent	SNP	A	A	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TOP2A	7153	hgsc.bcm.edu	37	17	38556798	38556798	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
USP34	9736	hgsc.bcm.edu	37	2	61417437	61417437	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
VHL	7428	hgsc.bcm.edu	37	3	10188235	10188236	+	Frame_Shift_Ins	INS	-	-	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
WWC2	80014	hgsc.bcm.edu	37	4	184201996	184202001	+	In_Frame_Del	DEL	AAGAAG	AAGAAG	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	AAGAAG	AAGAAG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZAN	7455	hgsc.bcm.edu	37	7	100353014	100353016	+	In_Frame_Del	DEL	ACA	ACA	-	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	ACA	ACA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF572	137209	hgsc.bcm.edu	37	8	125987897	125987897	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZP3	7784	hgsc.bcm.edu	37	7	76071183	76071184	+	Frame_Shift_Ins	INS	-	-	G	novel	.	TCGA-BP-4807-01	TCGA-BP-4807-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
