Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA2	20	broad.mit.edu	37	9	139906470	139906470	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCA5	23461	broad.mit.edu	37	17	67302951	67302951	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40061042	40061042	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAM29	11086	broad.mit.edu	37	4	175896895	175896895	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72493772	72493772	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APOBEC1	339	broad.mit.edu	37	12	7807218	7807218	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115323525	115323525	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP6V1B2	526	broad.mit.edu	37	8	20077883	20077883	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97051866	97051866	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34190556	34190556	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37186442	37186442	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC142	84865	broad.mit.edu	37	2	74709054	74709054	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21752149	21752149	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH24	64403	broad.mit.edu	37	14	23522709	23522709	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11845736	11845736	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139983076	139983076	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22920118	22920118	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53673565	53673565	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM168A	23201	broad.mit.edu	37	11	73130927	73130927	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55216193	55216193	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIST1H2BC	8347	broad.mit.edu	37	6	26124127	26124127	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HMG20A	10363	broad.mit.edu	37	15	77763256	77763256	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86389158	86389158	+	Silent	SNP	A	C	C	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNH4	23415	broad.mit.edu	37	17	40330118	40330118	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MARCH8	220972	broad.mit.edu	37	10	45959707	45959707	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10432798	10432798	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ORC5L	5001	broad.mit.edu	37	7	103777250	103777250	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PARP15	165631	broad.mit.edu	37	3	122345722	122345722	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PAX9	5083	broad.mit.edu	37	14	37132609	37132609	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14852297	14852297	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHG5	57449	broad.mit.edu	37	1	6532596	6532596	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PNP	4860	broad.mit.edu	37	14	20940624	20940624	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121828700	121828700	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PROX1	5629	broad.mit.edu	37	1	214171381	214171381	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RFX7	64864	broad.mit.edu	37	15	56395867	56395867	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SECISBP2	79048	broad.mit.edu	37	9	91972394	91972394	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26693016	26693016	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIRT4	23409	broad.mit.edu	37	12	120741603	120741603	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62744739	62744739	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNJ1	8867	broad.mit.edu	37	21	34099147	34099147	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TADA3	10474	broad.mit.edu	37	3	9825848	9825848	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSKS	60385	broad.mit.edu	37	19	50266419	50266419	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231076263	231076263	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10183734	10183734	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12336481	12336481	+	Missense_Mutation	SNP	C	T	T	rs41279448	by1000genomes	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XAB2	56949	broad.mit.edu	37	19	7688070	7688070	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFP36L2	678	broad.mit.edu	37	2	43452170	43452170	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF610	162963	broad.mit.edu	37	19	52856954	52856954	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127013721	127013721	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4968-01	TCGA-BP-4968-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
