Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADCY9	115	broad.mit.edu	37	16	4165079	4165079	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44147521	44147521	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134221461	134221461	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATE1	11101	broad.mit.edu	37	10	123503288	123503288	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52511675	52511675	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32693017	32693017	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf107	219621	broad.mit.edu	37	10	63520664	63520664	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C11orf73	51501	broad.mit.edu	37	11	86048459	86048459	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C12orf74	338809	broad.mit.edu	37	12	93100735	93100735	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C13orf31	144811	broad.mit.edu	37	13	44458052	44458052	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230891141	230891141	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31683360	31683360	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68862136	68862136	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51261213	51261213	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189906379	189906379	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17151661	17151661	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127714472	127714472	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FXYD5	53827	broad.mit.edu	37	19	35651641	35651641	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158115425	158115425	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNJ11	3767	broad.mit.edu	37	11	17409232	17409232	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LHX6	26468	broad.mit.edu	37	9	124975917	124975917	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAMDC4	158056	broad.mit.edu	37	9	139748706	139748706	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MBD4	8930	broad.mit.edu	37	3	129152917	129152917	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR548F5	100302239	broad.mit.edu	37	X	32659673	32659673	+	miRNA	SNP	A	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MOB2	81532	broad.mit.edu	37	11	1491652	1491652	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62887719	62887719	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR3A1	4994	broad.mit.edu	37	17	3195183	3195183	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PARP11	57097	broad.mit.edu	37	12	3939160	3939160	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109382975	109382975	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF32	140545	broad.mit.edu	37	7	156450264	156450264	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RXRB	6257	broad.mit.edu	37	6	33168094	33168094	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71429905	71429905	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108227661	108227661	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINE2	5270	broad.mit.edu	37	2	224866441	224866441	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC22A4	6583	broad.mit.edu	37	5	131671519	131671519	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70148386	70148386	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	27999019	27999019	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19167003	19167003	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TEX11	56159	broad.mit.edu	37	X	69825332	69825332	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THBS1	7057	broad.mit.edu	37	15	39877708	39877708	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM165	55858	broad.mit.edu	37	4	56277929	56277929	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMX3	54495	broad.mit.edu	37	18	66367641	66367641	+	Splice_Site	SNP	C	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117840239	117840239	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10191611	10191612	+	Frame_Shift_Del	DEL	AC	-	-	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	AC	AC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB41	360023	broad.mit.edu	37	1	197159944	197159944	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68270971	68270971	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF782	158431	broad.mit.edu	37	9	99581317	99581317	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4977-01	TCGA-BP-4977-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
