Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AKR1B15	441282	broad.mit.edu	37	7	134254201	134254201	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf118	55088	broad.mit.edu	37	10	115885644	115885644	+	Splice_Site	SNP	C	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C19orf26	255057	broad.mit.edu	37	19	1234610	1234610	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLCNKB	1188	broad.mit.edu	37	1	16372093	16372093	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61495757	61495757	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6648210	6648210	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOLPP1	57171	broad.mit.edu	37	9	131851258	131851258	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOT1L	84444	broad.mit.edu	37	19	2223398	2223398	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAAH	2166	broad.mit.edu	37	1	46871335	46871335	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45537687	45537687	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92345764	92345764	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPN2	54707	broad.mit.edu	37	1	27216524	27216524	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82948369	82948369	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63955350	63955350	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXC8	3224	broad.mit.edu	37	12	54403161	54403161	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IFIT3	3437	broad.mit.edu	37	10	91099779	91099779	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1639724	1639724	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18688657	18688657	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KANK3	256949	broad.mit.edu	37	19	8398950	8398961	+	In_Frame_Del	DEL	TCGCTGTCGCCA	-	-	rs79105740	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	TCGCTGTCGCCA	TCGCTGTCGCCA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72340956	72340956	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMAN1	3998	broad.mit.edu	37	18	57026429	57026429	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60265014	60265014	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109507838	109507838	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYSM1	114803	broad.mit.edu	37	1	59125681	59125681	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OVCH2	341277	broad.mit.edu	37	11	7722880	7722880	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PARD6B	84612	broad.mit.edu	37	20	49366663	49366664	+	Frame_Shift_Del	DEL	AA	-	-	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	AA	AA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLDIP2	26073	broad.mit.edu	37	17	26684390	26684391	+	Splice_Site	INS	-	C	C	rs67934205;rs68078752	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73626918	73626919	+	Splice_Site	INS	-	TG	TG	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70140991	70140991	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SFRS15	57466	broad.mit.edu	37	21	33066569	33066569	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25770630	25770630	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52547770	52547770	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STRN4	29888	broad.mit.edu	37	19	47226196	47226196	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SUPT7L	9913	broad.mit.edu	37	2	27880496	27880497	+	Frame_Shift_Del	DEL	AG	-	-	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	AG	AG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D10B	26000	broad.mit.edu	37	16	30380671	30380671	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95645766	95645766	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	53908347	53908347	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF100	163227	broad.mit.edu	37	19	21909595	21909595	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF623	9831	broad.mit.edu	37	8	144732593	144732593	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5007-01	TCGA-BP-5007-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
