Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AIP	9049	genome.wustl.edu	37	11	67254510	67254510	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67254510	67254510	G	A	SNP	AIP	NM_003977	human	genbank	57_37b	+1	reviewed	missense	c.133	p.D45N	0.000	superfamily_SSF54534,HMMPfam_FKBP_C	superfamily_SSF54534,HMMPfam_FKBP_C,superfamily_SSF48452,HMMPfam_TPR_2	-	no_errors	
APOL3	80833	genome.wustl.edu	37	22	36537431	36537431	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	36537431	36537431	C	T	SNP	APOL3	NM_145640	human	genbank	57_37b	-1	reviewed	silent	c.1026	p.A342	0.000	HMMPfam_ApoL	HMMPfam_ApoL	-	no_errors	
ATP2B1	490	genome.wustl.edu	37	12	89998003	89998003	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	89998003	89998003	A	G	SNP	ATP2B1	NM_001682	human	genbank	57_37b	-1	reviewed	missense	c.2563	p.F855L	1.000	superfamily_SSF81665	HMMPfam_Cation_ATPase_N,superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Cation_ATPase_C	-	no_errors	
C5orf42	65250	genome.wustl.edu	37	5	37158402	37158402	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	37158402	37158402	T	A	SNP	C5orf42	NM_023073	human	genbank	57_37b	-1	predicted	missense	c.4376	p.Y1459F	0.404	NULL	NULL	-	no_errors	
C5orf42	65250	genome.wustl.edu	37	5	37169279	37169279	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	37169279	37169279	G	A	SNP	C5orf42	NM_023073	human	genbank	57_37b	-1	predicted	missense	c.3487	p.H1163Y	0.020	NULL	NULL	-	no_errors	
CDH15	1013	genome.wustl.edu	37	16	89245960	89245960	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89245960	89245960	G	A	SNP	CDH15	NM_004933	human	genbank	57_37b	+1	reviewed	missense	c.179	p.R60H	0.839	superfamily_Cadherin,HMMPfam_Cadherin	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CDH4	1002	genome.wustl.edu	37	20	60419757	60419757	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	60419757	60419757	C	T	SNP	CDH4	NM_001794	human	genbank	57_37b	+1	reviewed	missense	c.610	p.R204W	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
DAB2IP	153090	genome.wustl.edu	37	9	124528882	124528882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	124528882	124528882	C	T	SNP	DAB2IP	NM_032552	human	genbank	57_37b	+1	validated	missense	c.1486	p.R496C	1.000	HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1	HMMSmart_SM00233,superfamily_PH domain-like,HMMPfam_PH,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1	-	no_errors	
DNAH17	8632	genome.wustl.edu	37	17	76487632	76487632	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	76487632	76487632	G	A	SNP	DNAH17	ENST00000389840	human	ensembl	57_37b	-1	known	nonsense	c.6520	p.R2174*	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA_5	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	-	no_errors	
DNAJB13	374407	genome.wustl.edu	37	11	73680349	73680349	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	73680349	73680349	C	G	SNP	DNAJB13	NM_153614	human	genbank	57_37b	+1	provisional	missense	c.779	p.P260R	1.000	HMMPfam_DnaJ_C,superfamily_HSP40/DnaJ peptide-binding domain	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_DNAJ_1,superfamily_HSP40/DnaJ peptide-binding domain,HMMPfam_DnaJ_C	-	no_errors	
ENSG00000201741	0	genome.wustl.edu	37	17	17363784	17363784	+	RNA	SNP	A	A	C	rs1242509	byCluster;byFrequency;by1000genomes	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	17363784	17363784	A	C	SNP	ENSG00000201741	ENST00000364871	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.044	-	-	-		
ENSG00000215315	0	genome.wustl.edu	37	15	30337381	30337381	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	30337381	30337381	G	A	SNP	ENSG00000215315	ENST00000400005	human	ensembl	57_37b	+1	known	silent	c.555	p.P185	0.965	NULL	HMMPfam_MARVEL	-	no_errors	
FLG	2312	genome.wustl.edu	37	1	152284782	152284782	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152284782	152284782	C	T	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	silent	c.2580	p.S860	0.000	NULL	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors	
FLVCR1	28982	genome.wustl.edu	37	1	213037133	213037133	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	213037133	213037133	C	T	SNP	FLVCR1	NM_014053	human	genbank	57_37b	+1	validated	missense	c.805	p.L269F	0.039	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors	
GAGE2B	645037	genome.wustl.edu	37	X	49236865	49236865	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49236865	49236865	G	C	SNP	GAGE2B	NM_001098411	human	genbank	57_37b	+1	validated	missense	c.35	p.R12T	0.002	HMMPfam_GAGE	HMMPfam_GAGE	-	no_errors	
GREB1	9687	genome.wustl.edu	37	2	11772121	11772121	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	11772121	11772121	C	T	SNP	GREB1	NM_014668	human	genbank	57_37b	+1	reviewed	silent	c.4698	p.D1566	0.241	NULL	NULL	-	no_errors	
HAPLN4	404037	genome.wustl.edu	37	19	19369435	19369435	+	Silent	SNP	A	A	G	rs2074295	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19369435	19369435	A	G	SNP	HAPLN4	NM_023002	human	genbank	57_37b	-1	validated	silent	c.714	p.S238	0.176	HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-		
HMHA1	23526	genome.wustl.edu	37	19	1080311	1080311	+	Silent	SNP	G	G	C	rs2074454	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1080311	1080311	G	C	SNP	HMHA1	NM_012292	human	genbank	57_37b	+1	validated	silent	c.1761	p.P587	0.000	NULL	HMMSmart_FCH,superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-		
HNRNPA3	220988	genome.wustl.edu	37	2	178081262	178081262	+	Silent	SNP	T	T	C	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	178081262	178081262	T	C	SNP	HNRNPA3	NM_194247	human	genbank	57_37b	+1	validated	silent	c.585	p.N195	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
HSPD1	3329	genome.wustl.edu	37	2	198353857	198353857	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	198353857	198353857	C	A	SNP	HSPD1	NM_002156	human	genbank	57_37b	-1	reviewed	missense	c.1084	p.G362C	1.000	superfamily_GroEL-ATPase,HMMPfam_Cpn60_TCP1,superfamily_SSF52029	superfamily_GroEL-ATPase,HMMPfam_Cpn60_TCP1,superfamily_SSF54849,superfamily_SSF52029,PatternScan_CHAPERONINS_CPN60	-	no_errors	
INPP4B	8821	genome.wustl.edu	37	4	143114276	143114276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	143114276	143114276	C	T	SNP	INPP4B	NM_001101669	human	genbank	57_37b	-1	reviewed	missense	c.1145	p.R382Q	1.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors	
KIAA1755	85449	genome.wustl.edu	37	20	36874487	36874487	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	36874487	36874487	C	T	SNP	KIAA1755	NM_001029864	human	genbank	57_37b	-1	predicted	silent	c.45	p.A15	0.072	NULL	superfamily_Spectrin repeat	-	no_errors	
KITLG	4254	genome.wustl.edu	37	12	88910120	88910120	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	88910120	88910120	G	A	SNP	KITLG	NM_000899	human	genbank	57_37b	-1	reviewed	missense	c.511	p.P171S	1.000	HMMPfam_SCF	HMMPfam_SCF,superfamily_4-helical cytokines	-	no_errors	
LOC645676	645676	genome.wustl.edu	37	1	155531968	155531968	+	RNA	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155531968	155531968	C	T	SNP	LOC645676	NR_027023	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.995	-	-	-	no_errors	
MASTL	84930	genome.wustl.edu	37	10	27459378	27459378	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	27459378	27459378	A	G	SNP	MASTL	NM_032844	human	genbank	57_37b	+1	reviewed	missense	c.1490	p.K497R	0.005	superfamily_Kinase_like	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X	-	no_errors	
MCOLN2	255231	genome.wustl.edu	37	1	85403443	85403443	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	85403443	85403443	C	T	SNP	MCOLN2	NM_153259	human	genbank	57_37b	-1	reviewed	missense	c.1330	p.D444N	1.000	HMMPfam_Ion_trans	HMMPfam_Ion_trans	-	no_errors	
MEX3B	84206	genome.wustl.edu	37	15	82336479	82336479	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	82336479	82336479	G	A	SNP	MEX3B	NM_032246	human	genbank	57_37b	-1	provisional	silent	c.732	p.N244	1.000	NULL	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMPfam_KH_1,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors	
MFF	56947	genome.wustl.edu	37	2	228194484	228194484	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	228194484	228194484	A	T	SNP	MFF	NM_020194	human	genbank	57_37b	+1	provisional	missense	c.23	p.D8V	1.000	NULL	HMMPfam_DUF800	-	no_errors	
MYCBP2	23077	genome.wustl.edu	37	13	77644827	77644827	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	77644827	77644827	A	G	SNP	MYCBP2	NM_015057	human	genbank	57_37b	-1	validated	missense	c.11729	p.L3910P	1.000	NULL	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,HMMPfam_PHR,superfamily_E set domains,superfamily_Galactose-binding domain-like,superfamily_RING/U-box,HMMSmart_SM00184	-	no_errors	
MYH8	4626	genome.wustl.edu	37	17	10303960	10303960	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10303960	10303960	G	T	SNP	MYH8	NM_002472	human	genbank	57_37b	-1	reviewed	missense	c.3482	p.S1161Y	0.883	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
PCDHGB5	56101	genome.wustl.edu	37	5	140779354	140779354	+	Missense_Mutation	SNP	A	A	C	rs111395890	byCluster;by1000genomes	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140779354	140779354	A	C	SNP	PCDHGB5	NM_018925	human	genbank	57_37b	+1	reviewed	missense	c.1660	p.N554H	1.000	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-		
PHRF1	57661	genome.wustl.edu	37	11	610989	610991	+	In_Frame_Del	DEL	GGA	GGA	-	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	GGA	GGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	610989	610991	GGA	-	DEL	PHRF1	NM_020901	human	genbank	57_37b	+1	validated	in_frame_del	c.4710_4712	p.E1572in_frame_del	1.000:1.000:1.000	NULL	superfamily_SSF57850,HMMPfam_zf-C3HC4,HMMSmart_RING,PatternScan_ZF_RING_1,PatternScan_ZF_PHD_1,superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD	(deletion:cds_exon[610954,611082])	no_errors	
PKD1L3	342372	genome.wustl.edu	37	16	72032228	72032228	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	72032228	72032228	G	A	SNP	PKD1L3	ENST00000335106	human	ensembl	57_37b	-1	known	missense	c.361	p.R121W	0.000	superfamily_C-type lectin-like	superfamily_C-type lectin-like,HMMPfam_GPS,HMMSmart_SM00303,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_Ion_trans	-	no_errors	
POFUT1	23509	genome.wustl.edu	37	20	30816166	30816166	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30816166	30816166	T	A	SNP	POFUT1	NM_015352	human	genbank	57_37b	+1	reviewed	missense	c.643	p.S215T	1.000	HMMPfam_O-FucT	HMMPfam_O-FucT	-	no_errors	
POL3S	339105	genome.wustl.edu	37	16	31096164	31096164	+	Missense_Mutation	SNP	G	G	C	rs7199949	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31096164	31096164	G	C	SNP	POL3S	NM_001039503	human	genbank	57_37b	-1	validated	missense	c.1216	p.P406A	0.000	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-		
PRKCG	5582	genome.wustl.edu	37	19	54403682	54403682	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54403682	54403682	G	A	SNP	PRKCG	NM_002739	human	genbank	57_37b	+1	reviewed	silent	c.1383	p.A461	0.182	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors	
RUNX1	861	genome.wustl.edu	37	21	36252860	36252860	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	36252860	36252860	C	G	SNP	RUNX1	NM_001754	human	genbank	57_37b	-1	reviewed	missense	c.502	p.G168R	1.000	HMMPfam_Runt,superfamily_p53-like transcription factors	HMMPfam_Runt,superfamily_p53-like transcription factors,HMMPfam_RunxI	-	no_errors	
SLC9A1	6548	genome.wustl.edu	37	1	27429181	27429181	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	27429181	27429181	G	A	SNP	SLC9A1	NM_003047	human	genbank	57_37b	-1	validated	silent	c.1629	p.H543	1.000	NULL	HMMPfam_Na_H_Exchanger	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7577120	7577120	+	Missense_Mutation	SNP	C	C	T	rs28934576	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577120	7577120	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.818	p.R273H	0.864	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-		
TRIM17	51127	genome.wustl.edu	37	1	228596209	228596209	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	228596209	228596209	C	T	SNP	TRIM17	NM_001024940	human	genbank	57_37b	-1	reviewed	missense	c.1127	p.R376Q	1.000	HMMPfam_SPRY,HMMSmart_SPRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
TSHR	7253	genome.wustl.edu	37	14	81609772	81609772	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81609772	81609772	C	A	SNP	TSHR	NM_000369	human	genbank	57_37b	+1	reviewed	missense	c.1370	p.A457D	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
ZNF814	400721	genome.wustl.edu	37	19	58384420	58384420	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58384420	58384420	A	G	SNP	ZNF814	NM_001144989	human	genbank	57_37b	-1	validated	missense	c.2338	p.S780P	0.024	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZYX	7791	genome.wustl.edu	37	7	143085937	143085937	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12O-01	TCGA-C8-A12O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	143085937	143085937	C	T	SNP	ZYX	NM_001010972	human	genbank	57_37b	+1	reviewed	silent	c.1392	p.H464	1.000	superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_SSF57716	-	no_errors	
