Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACTG1	71	broad.mit.edu	37	17	79478982	79478982	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADRB2	154	broad.mit.edu	37	5	148207220	148207220	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKAP7	9465	broad.mit.edu	37	6	131540937	131540937	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68111271	68111271	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27107213	27107213	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BANK1	55024	broad.mit.edu	37	4	102751087	102751087	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94048304	94048304	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94048425	94048425	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BDH2	56898	broad.mit.edu	37	4	104000886	104000886	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C9orf163	158055	broad.mit.edu	37	9	139379131	139379131	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAMK1	8536	broad.mit.edu	37	3	9809372	9809383	+	In_Frame_Del	DEL	TCGTAGATGTCT	-	-	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	TCGTAGATGTCT	TCGTAGATGTCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC157	550631	broad.mit.edu	37	22	30766638	30766638	+	Silent	SNP	C	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLSTN1	22883	broad.mit.edu	37	1	9809930	9809930	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76495979	76495979	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94050324	94050324	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34052715	34052715	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUL1	8454	broad.mit.edu	37	7	148454216	148454216	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28972163	28972163	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DUSP16	80824	broad.mit.edu	37	12	12629998	12629998	+	Silent	SNP	A	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EMILIN1	11117	broad.mit.edu	37	2	27307380	27307380	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14755050	14755050	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68802104	68802104	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM54A	113115	broad.mit.edu	37	6	136562720	136562720	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54805594	54805594	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2983386	2983386	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202090	39202090	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104126846	104126846	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GGN	199720	broad.mit.edu	37	19	38876071	38876071	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPBAR1	151306	broad.mit.edu	37	2	219127645	219127645	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR123	84435	broad.mit.edu	37	10	134942620	134942620	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41065513	41065513	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160471666	160471666	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL12A	3592	broad.mit.edu	37	3	159706882	159706882	+	Silent	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IPO11	51194	broad.mit.edu	37	5	61779118	61779118	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KANK1	23189	broad.mit.edu	37	9	732501	732501	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163236424	163236424	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLHL21	9903	broad.mit.edu	37	1	6655551	6655551	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97766647	97766647	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC33	375387	broad.mit.edu	37	3	196387275	196387275	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRTM2	654429	broad.mit.edu	37	12	1943690	1943690	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAOA	4128	broad.mit.edu	37	X	43571993	43571993	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCCC2	64087	broad.mit.edu	37	5	70945080	70945080	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR22	407004	broad.mit.edu	37	17	1617206	1617206	+	miRNA	SNP	C	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118370617	118370617	+	Silent	SNP	T	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MPZL2	10205	broad.mit.edu	37	11	118133279	118133279	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYBL1	4603	broad.mit.edu	37	8	67484765	67484765	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16711272	16711272	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120468210	120468210	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176562309	176562309	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47827752	47827752	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52621512	52621515	+	Frame_Shift_Del	DEL	ACAA	-	-	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	ACAA	ACAA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLAGL2	5326	broad.mit.edu	37	20	30784502	30784502	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRMT1	3276	broad.mit.edu	37	19	50189963	50189963	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRTFDC1	56952	broad.mit.edu	37	10	25145923	25145923	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125782628	125782628	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAD50	10111	broad.mit.edu	37	5	131930637	131930637	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM26	64062	broad.mit.edu	37	13	79940847	79940847	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127961369	127961369	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RC3H1	149041	broad.mit.edu	37	1	173934019	173934019	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RMND5B	64777	broad.mit.edu	37	5	177574549	177574549	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNASEL	6041	broad.mit.edu	37	1	182544563	182544563	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNPEPL1	57140	broad.mit.edu	37	2	241514017	241514017	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEC23IP	11196	broad.mit.edu	37	10	121657969	121657969	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13845886	13845886	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70338536	70338536	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43212331	43212331	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26718743	26718743	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27424293	27424293	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC9A1	6548	broad.mit.edu	37	1	27440753	27440753	+	Nonsense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SVOPL	136306	broad.mit.edu	37	7	138333763	138333763	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10907856	10907856	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D24	57465	broad.mit.edu	37	16	2549923	2549923	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM149	79713	broad.mit.edu	37	19	36230813	36230813	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM208	29100	broad.mit.edu	37	16	67261756	67261756	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170893117	170893117	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40662303	40662303	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38266299	38266299	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31767620	31767620	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179427281	179427281	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138944050	138944050	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70834811	70834811	+	De_novo_Start_OutOfFrame	SNP	G	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188204	10188204	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85664902	85664902	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR93	56964	broad.mit.edu	37	15	90276288	90276288	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	936351	936351	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
YLPM1	56252	broad.mit.edu	37	14	75230625	75230626	+	Frame_Shift_Ins	INS	-	CC	CC	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZDHHC5	25921	broad.mit.edu	37	11	57457522	57457522	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM1	79830	broad.mit.edu	37	1	35580008	35580008	+	Silent	SNP	C	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6953811	6953811	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87969169	87969169	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF429	353088	broad.mit.edu	37	19	21719682	21719682	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF543	125919	broad.mit.edu	37	19	57835116	57835116	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9578075	9578075	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	56007482	56007482	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4912-01	TCGA-CJ-4912-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
