Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABP1	26	hgsc.bcm.edu	37	7	150554954	150554954	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ACVR1B	91	hgsc.bcm.edu	37	12	52369222	52369222	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AKAP9	10142	hgsc.bcm.edu	37	7	91700229	91700229	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ANO7	50636	hgsc.bcm.edu	37	2	242135132	242135132	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
AP2M1	1173	hgsc.bcm.edu	37	3	183899959	183899959	+	Silent	SNP	G	G	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ARPC1B	10095	hgsc.bcm.edu	37	7	98984318	98984318	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ASH1L	55870	hgsc.bcm.edu	37	1	155319244	155319244	+	Silent	SNP	A	A	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BTK	695	hgsc.bcm.edu	37	X	100611135	100611135	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CELSR1	9620	hgsc.bcm.edu	37	22	46832125	46832125	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DIO2	1734	hgsc.bcm.edu	37	14	80669159	80669162	+	Frame_Shift_Del	DEL	ATGC	ATGC	-	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	ATGC	ATGC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNAH9	1770	hgsc.bcm.edu	37	17	11725796	11725796	+	Silent	SNP	C	C	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DNAJC5G	285126	hgsc.bcm.edu	37	2	27500630	27500630	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ERICH1	157697	hgsc.bcm.edu	37	8	623641	623641	+	Silent	SNP	A	A	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM23B	100289299	hgsc.bcm.edu	37	10	18087630	18087631	+	Frame_Shift_Del	DEL	TG	TG	-	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	TG	TG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FBXO3	26273	hgsc.bcm.edu	37	11	33763575	33763575	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FLNC	2318	hgsc.bcm.edu	37	7	128493791	128493791	+	Silent	SNP	G	G	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FRMPD1	22844	hgsc.bcm.edu	37	9	37729831	37729831	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FUT1	2523	hgsc.bcm.edu	37	19	49253511	49253511	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GNAZ	2781	hgsc.bcm.edu	37	22	23465575	23465575	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GPI	2821	hgsc.bcm.edu	37	19	34890920	34890920	+	Silent	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GSK3A	2931	hgsc.bcm.edu	37	19	42736734	42736734	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HLA-DQB1	3119	hgsc.bcm.edu	37	6	32634306	32634306	+	Missense_Mutation	SNP	A	A	T	rs1049060	unknown	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
HLA-DQB1	3119	hgsc.bcm.edu	37	6	32634331	32634331	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KLHL21	9903	hgsc.bcm.edu	37	1	6661906	6661906	+	Silent	SNP	C	C	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KLHL3	26249	hgsc.bcm.edu	37	5	136963990	136963990	+	Silent	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LSM14B	149986	hgsc.bcm.edu	37	20	60705681	60705681	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NFRKB	4798	hgsc.bcm.edu	37	11	129739926	129739926	+	Silent	SNP	T	T	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NRIP1	8204	hgsc.bcm.edu	37	21	16337701	16337701	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PCDHGA6	56109	hgsc.bcm.edu	37	5	140754472	140754472	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PCNA	5111	hgsc.bcm.edu	37	20	5098199	5098199	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PHKB	5257	hgsc.bcm.edu	37	16	47628114	47628114	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PIH1D2	120379	hgsc.bcm.edu	37	11	111941954	111941954	+	Nonsense_Mutation	SNP	C	C	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLEKHG7	440107	hgsc.bcm.edu	37	12	93135275	93135275	+	Silent	SNP	T	T	C	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PTCH2	8643	hgsc.bcm.edu	37	1	45297418	45297418	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PTEN	5728	hgsc.bcm.edu	37	10	89720744	89720744	+	Nonsense_Mutation	SNP	G	G	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PTPRS	5802	hgsc.bcm.edu	37	19	5258062	5258062	+	Silent	SNP	C	C	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PUM2	23369	hgsc.bcm.edu	37	2	20478380	20478380	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ROR2	4920	hgsc.bcm.edu	37	9	94493360	94493360	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLCO1B1	10599	hgsc.bcm.edu	37	12	21370118	21370118	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SNTG2	54221	hgsc.bcm.edu	37	2	1204903	1204903	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
STAU1	6780	hgsc.bcm.edu	37	20	47739735	47739735	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SULT6B1	391365	hgsc.bcm.edu	37	2	37410624	37410624	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TAS2R43	259289	hgsc.bcm.edu	37	12	11244259	11244259	+	Silent	SNP	C	C	T	rs117195230	unknown	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMOD4	29765	hgsc.bcm.edu	37	1	151143913	151143913	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
WDR91	29062	hgsc.bcm.edu	37	7	134894458	134894458	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF354C	30832	hgsc.bcm.edu	37	5	178504125	178504125	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF624	57547	hgsc.bcm.edu	37	17	16525940	16525940	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF644	84146	hgsc.bcm.edu	37	1	91405509	91405509	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF644	84146	hgsc.bcm.edu	37	1	91405536	91405536	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF717	100131827	hgsc.bcm.edu	37	3	75788376	75788377	+	Frame_Shift_Ins	INS	-	-	TT	novel	.	TCGA-CZ-4858-01	TCGA-CZ-4858-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
