Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACSF2	80221	hgsc.bcm.edu	37	17	48540792	48540792	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ADCK3	56997	hgsc.bcm.edu	37	1	227171879	227171879	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ALB	213	hgsc.bcm.edu	37	4	74275111	74275111	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ARFGEF1	10565	hgsc.bcm.edu	37	8	68178355	68178355	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AURKA	6790	hgsc.bcm.edu	37	20	54945232	54945232	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BIRC6	57448	hgsc.bcm.edu	37	2	32626309	32626309	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BRWD1	54014	hgsc.bcm.edu	37	21	40559338	40559338	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C20orf117	140710	hgsc.bcm.edu	37	20	35414908	35414908	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C3	718	hgsc.bcm.edu	37	19	6697533	6697533	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCDC46	201134	hgsc.bcm.edu	37	17	64059172	64059172	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCRN4L	25819	hgsc.bcm.edu	37	4	139966177	139966177	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDC42BPA	8476	hgsc.bcm.edu	37	1	227192738	227192738	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDC42BPB	9578	hgsc.bcm.edu	37	14	103406034	103406034	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDC5L	988	hgsc.bcm.edu	37	6	44387290	44387290	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CERCAM	51148	hgsc.bcm.edu	37	9	131185203	131185209	+	Frame_Shift_Del	DEL	CGGCTGT	CGGCTGT	-	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	CGGCTGT	CGGCTGT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHEK2	11200	hgsc.bcm.edu	37	22	29091841	29091841	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHST9	83539	hgsc.bcm.edu	37	18	24496329	24496329	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
COBLL1	22837	hgsc.bcm.edu	37	2	165551694	165551694	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CTNNA1	1495	hgsc.bcm.edu	37	5	138147874	138147874	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CUX1	1523	hgsc.bcm.edu	37	7	101747717	101747717	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DAB2	1601	hgsc.bcm.edu	37	5	39383077	39383077	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EHMT2	10919	hgsc.bcm.edu	37	6	31848507	31848507	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EZH2	2146	hgsc.bcm.edu	37	7	148526869	148526869	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBN1	2200	hgsc.bcm.edu	37	15	48718059	48718059	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FHDC1	85462	hgsc.bcm.edu	37	4	153875438	153875438	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GFRA2	2675	hgsc.bcm.edu	37	8	21563505	21563505	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GHDC	84514	hgsc.bcm.edu	37	17	40342212	40342212	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPR15	2838	hgsc.bcm.edu	37	3	98251621	98251621	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GREB1L	80000	hgsc.bcm.edu	37	18	19032159	19032159	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HCN3	57657	hgsc.bcm.edu	37	1	155254427	155254427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HMG20A	10363	hgsc.bcm.edu	37	15	77756618	77756618	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HYOU1	10525	hgsc.bcm.edu	37	11	118922276	118922276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KCNH6	81033	hgsc.bcm.edu	37	17	61613155	61613155	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KDM4C	23081	hgsc.bcm.edu	37	9	7013979	7013979	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KITLG	4254	hgsc.bcm.edu	37	12	88910211	88910211	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KNTC1	9735	hgsc.bcm.edu	37	12	123034395	123034395	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KRT12	3859	hgsc.bcm.edu	37	17	39021170	39021171	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LIN54	132660	hgsc.bcm.edu	37	4	83857207	83857207	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LMBRD2	92255	hgsc.bcm.edu	37	5	36136613	36136613	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LRP1B	53353	hgsc.bcm.edu	37	2	141816539	141816539	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LTN1	26046	hgsc.bcm.edu	37	21	30316174	30316174	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAP3K4	4216	hgsc.bcm.edu	37	6	161523807	161523807	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ME2	4200	hgsc.bcm.edu	37	18	48422198	48422198	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
METTL3	56339	hgsc.bcm.edu	37	14	21967473	21967473	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MLLT10	8028	hgsc.bcm.edu	37	10	21827807	21827807	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MMP11	4320	hgsc.bcm.edu	37	22	24122848	24122848	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYEOV	26579	hgsc.bcm.edu	37	11	69063609	69063609	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYOT	9499	hgsc.bcm.edu	37	5	137222571	137222571	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NKRF	55922	hgsc.bcm.edu	37	X	118724240	118724240	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NOD2	64127	hgsc.bcm.edu	37	16	50733557	50733557	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NOSTRIN	115677	hgsc.bcm.edu	37	2	169707624	169707624	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NUDT12	83594	hgsc.bcm.edu	37	5	102891795	102891795	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR1J2	26740	hgsc.bcm.edu	37	9	125273444	125273444	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR2F1	26211	hgsc.bcm.edu	37	7	143657717	143657717	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR4C16	219428	hgsc.bcm.edu	37	11	55339616	55339616	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PACS1	55690	hgsc.bcm.edu	37	11	65988247	65988247	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDE5A	8654	hgsc.bcm.edu	37	4	120446851	120446851	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDGFRA	5156	hgsc.bcm.edu	37	4	55131162	55131162	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PFDN5	5204	hgsc.bcm.edu	37	12	53691896	53691896	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PHF14	9678	hgsc.bcm.edu	37	7	11076624	11076624	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PHLPP2	23035	hgsc.bcm.edu	37	16	71712811	71712811	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PLEKHH1	57475	hgsc.bcm.edu	37	14	68047714	68047714	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PM20D1	148811	hgsc.bcm.edu	37	1	205819199	205819199	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PPL	5493	hgsc.bcm.edu	37	16	4940260	4940260	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PPL	5493	hgsc.bcm.edu	37	16	4940261	4940261	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RC3H2	54542	hgsc.bcm.edu	37	9	125639776	125639776	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RDM1	201299	hgsc.bcm.edu	37	17	34257695	34257695	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RHOQ	23433	hgsc.bcm.edu	37	2	46803228	46803228	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SCYL3	57147	hgsc.bcm.edu	37	1	169833584	169833584	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC16A3	9123	hgsc.bcm.edu	37	17	80194627	80194627	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC25A12	8604	hgsc.bcm.edu	37	2	172725235	172725235	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLTM	79811	hgsc.bcm.edu	37	15	59189413	59189413	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SMCR8	140775	hgsc.bcm.edu	37	17	18219366	18219366	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SRP68	6730	hgsc.bcm.edu	37	17	74042206	74042206	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SSBP2	23635	hgsc.bcm.edu	37	5	80744621	80744621	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TALDO1	6888	hgsc.bcm.edu	37	11	763505	763505	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TBC1D8	11138	hgsc.bcm.edu	37	2	101706739	101706739	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TET2	54790	hgsc.bcm.edu	37	4	106180791	106180791	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
THBS1	7057	hgsc.bcm.edu	37	15	39882215	39882215	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMED6	146456	hgsc.bcm.edu	37	16	69385482	69385482	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMOD3	29766	hgsc.bcm.edu	37	15	52161517	52161517	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMPRSS6	164656	hgsc.bcm.edu	37	22	37469600	37469600	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TP53BP1	7158	hgsc.bcm.edu	37	15	43748191	43748191	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRIP12	9320	hgsc.bcm.edu	37	2	230652242	230652242	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRPC4	7223	hgsc.bcm.edu	37	13	38225456	38225456	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TTC28	23331	hgsc.bcm.edu	37	22	28504358	28504358	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TTN	7273	hgsc.bcm.edu	37	2	179468956	179468956	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
UBAP2	55833	hgsc.bcm.edu	37	9	33941709	33941709	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VCX2	51480	hgsc.bcm.edu	37	X	8138165	8138168	+	Frame_Shift_Del	DEL	CCTC	CCTC	-	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	CCTC	CCTC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VHL	7428	hgsc.bcm.edu	37	3	10188234	10188235	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
XPO5	57510	hgsc.bcm.edu	37	6	43493658	43493658	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZBTB37	84614	hgsc.bcm.edu	37	1	173854993	173854993	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZFPM2	23414	hgsc.bcm.edu	37	8	106814187	106814187	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZFYVE9	9372	hgsc.bcm.edu	37	1	52698894	52698894	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF304	57343	hgsc.bcm.edu	37	19	57865150	57865150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5459-01	TCGA-CZ-5459-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
