Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADAM2	2515	genome.wustl.edu	37	8	39634664	39634664	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	39634664	39634664	C	A	SNP	ADAM2	NM_001464	human	genbank	57_37b	-1	reviewed	missense	c.908	p.S303I	0.056	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin"	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2"	-	no_errors	
ARHGAP11A	9824	genome.wustl.edu	37	15	32929935	32929935	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	32929935	32929935	C	A	SNP	ARHGAP11A	NM_014783	human	genbank	57_37b	+1	validated	missense	c.2961	p.N987K	0.019	NULL	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors	
ARL1	400	genome.wustl.edu	37	12	101790184	101790184	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	101790184	101790184	T	C	SNP	ARL1	NM_001177	human	genbank	57_37b	-1	reviewed	missense	c.508	p.M170V	1.000	HMMSmart_SM00177,HMMSmart_SM00178,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,PatternScan_ARF	HMMSmart_SM00177,HMMSmart_SM00178,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,PatternScan_ARF	-	no_errors	
ASB7	140460	genome.wustl.edu	37	15	101152633	101152636	+	Splice_Site	DEL	GTGA	GTGA	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	GTGA	GTGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	101152633	101152636	GTGA	-	DEL	ASB7	NM_198243	human	genbank	57_37b	+1	reviewed	splice_site_del	c.211+1_211+1	e1+1	1.000:1.000:1.000:1.000	-	-	(deletion:intron[101152633,101169641])	no_errors	
ATP10B	23120	genome.wustl.edu	37	5	160063260	160063260	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	160063260	160063260	C	A	SNP	ATP10B	NM_025153	human	genbank	57_37b	-1	validated	missense	c.1057	p.A353S	0.592	HMMPfam_E1-E2_ATPase	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Hydrolase_3	-	no_errors	
ATP1A3	478	genome.wustl.edu	37	19	42474581	42474581	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42474581	42474581	C	A	SNP	ATP1A3	NM_152296	human	genbank	57_37b	-1	reviewed	missense	c.2377	p.G793C	1.000	superfamily_SSF81665,HMMPfam_Cation_ATPase_C	HMMPfam_Cation_ATPase_N,superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Cation_ATPase_C	-	no_errors	
ATP8B1	5205	genome.wustl.edu	37	18	55361813	55361813	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	55361813	55361813	C	T	SNP	ATP8B1	NM_005603	human	genbank	57_37b	-1	reviewed	splice_site	c.1029+1	e10+1	1.000	-	-	-	no_errors	
ATP8B2	57198	genome.wustl.edu	37	1	154302873	154302873	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154302873	154302873	A	C	SNP	ATP8B2	NM_020452	human	genbank	57_37b	+1	reviewed	missense	c.132	p.E44D	1.000	NULL	superfamily_SSF81665,superfamily_SSF81653,HMMPfam_E1-E2_ATPase,superfamily_SSF56784,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Hydrolase_3	-	no_errors	
BCAT2	587	genome.wustl.edu	37	19	49302971	49302971	+	Missense_Mutation	SNP	C	C	T	rs11548194	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49302971	49302971	C	T	SNP	BCAT2	NM_001190	human	genbank	57_37b	-1	reviewed	missense	c.656	p.R219Q	0.998	superfamily_D-aminoacid aminotransferase-like PLP-dependent enzymes,HMMPfam_Aminotran_4	superfamily_D-aminoacid aminotransferase-like PLP-dependent enzymes,HMMPfam_Aminotran_4,PatternScan_AA_TRANSFER_CLASS_4	-		
BEND7	222389	genome.wustl.edu	37	10	13522910	13522910	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	13522910	13522910	C	G	SNP	BEND7	NM_152751	human	genbank	57_37b	-1	validated	missense	c.896	p.G299A	1.000	HMMPfam_BEN	HMMPfam_BEN	-	no_errors	
BTBD12	84464	genome.wustl.edu	37	16	3632422	3632422	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3632422	3632422	G	C	SNP	BTBD12	NM_032444	human	genbank	57_37b	-1	provisional	missense	c.5426	p.T1809S	1.000	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225	-	no_errors	
C12orf53	196500	genome.wustl.edu	37	12	6804780	6804780	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6804780	6804780	G	T	SNP	C12orf53	NM_153685	human	genbank	57_37b	-1	predicted	missense	c.643	p.Q215K	1.000	NULL	NULL	-	no_errors	
C17orf47	284083	genome.wustl.edu	37	17	56620848	56620848	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	56620848	56620848	C	T	SNP	C17orf47	NM_001038704	human	genbank	57_37b	-1	predicted	missense	c.700	p.A234T	0.000	NULL	NULL	-	no_errors	
C17orf81	23587	genome.wustl.edu	37	17	7158042	7158042	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7158042	7158042	T	C	SNP	C17orf81	NM_015362	human	genbank	57_37b	+1	validated	missense	c.377	p.L126P	1.000	HMMPfam_Hap2_elong	HMMPfam_Hap2_elong	-	no_errors	
C2orf60	129450	genome.wustl.edu	37	2	200795492	200795493	+	RNA	INS	-	-	AGAA	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	200795492	200795493	-	AGAA	INS	C2orf60	NR_004862	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.033:0.014	-	-	-	no_errors	
C2orf71	388939	genome.wustl.edu	37	2	29294720	29294720	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	29294720	29294720	G	T	SNP	C2orf71	NM_001029883	human	genbank	57_37b	-1	predicted	missense	c.2408	p.P803H	0.001	NULL	NULL	-	no_errors	
C3orf77	375337	genome.wustl.edu	37	3	44332261	44332261	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	44332261	44332261	A	T	SNP	C3orf77	NM_001145030	human	genbank	57_37b	+1	validated	splice_site	c.3682-2	e12-2	0.990	-	-	-	no_errors	
CASKIN1	57524	genome.wustl.edu	37	16	2240078	2240078	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2240078	2240078	G	T	SNP	CASKIN1	NM_020764	human	genbank	57_37b	-1	validated	missense	c.240	p.N80K	1.000	superfamily_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_1	-	no_errors	
CATSPER3	347732	genome.wustl.edu	37	5	134346160	134346160	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	134346160	134346160	G	C	SNP	CATSPER3	NM_178019	human	genbank	57_37b	+1	validated	missense	c.1034	p.S345T	0.863	NULL	superfamily_SSF81324,HMMPfam_Ion_trans	-	no_errors	
CD8A	925	genome.wustl.edu	37	2	87016512	87016512	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	87016512	87016512	C	A	SNP	CD8A	NM_001768	human	genbank	57_37b	-1	reviewed	missense	c.559	p.A187S	0.888	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406	-	no_errors	
CDC25B	994	genome.wustl.edu	37	20	3782017	3782017	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	3782017	3782017	C	T	SNP	CDC25B	NM_021873	human	genbank	57_37b	+1	reviewed	silent	c.822	p.I274	1.000	HMMPfam_M-inducer_phosp	HMMPfam_M-inducer_phosp,superfamily_Rhodanese/Cell cycle control phosphatase,HMMSmart_SM00450,HMMPfam_Rhodanese	-	no_errors	
CEP164	22897	genome.wustl.edu	37	11	117280410	117280410	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	117280410	117280410	G	A	SNP	CEP164	NM_014956	human	genbank	57_37b	+1	validated	silent	c.3825	p.L1275	0.068	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW	-	no_errors	
CEP290	80184	genome.wustl.edu	37	12	88513938	88513938	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	88513938	88513938	T	C	SNP	CEP290	NM_025114	human	genbank	57_37b	-1	reviewed	missense	c.1475	p.K492R	1.000	NULL	NULL	-	no_errors	
CEP350	9857	genome.wustl.edu	37	1	180047635	180047635	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	180047635	180047635	C	G	SNP	CEP350	NM_014810	human	genbank	57_37b	+1	reviewed	nonsense	c.5805	p.Y1935*	1.000	NULL	superfamily_SSF74924,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1	-	no_errors	
CHST3	9469	genome.wustl.edu	37	10	73767504	73767506	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	73767504	73767506	AAG	-	DEL	CHST3	NM_004273	human	genbank	57_37b	+1	reviewed	in_frame_del	c.715_717	p.K240in_frame_del	1.000:1.000:1.000	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	(deletion:cds_exon[73766930,73768229])	no_errors	
CLEC10A	10462	genome.wustl.edu	37	17	6978705	6978705	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	6978705	6978705	A	C	SNP	CLEC10A	NM_182906	human	genbank	57_37b	-1	reviewed	missense	c.756	p.D252E	1.000	HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C	HMMPfam_Lectin_N,HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors	
CNTN1	1272	genome.wustl.edu	37	12	41327271	41327271	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	41327271	41327271	A	C	SNP	CNTN1	NM_001843	human	genbank	57_37b	+1	reviewed	missense	c.712	p.K238Q	1.000	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_V-set,PatternScan_N6_MTASE,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
COG2	22796	genome.wustl.edu	37	1	230822805	230822805	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	230822805	230822805	C	T	SNP	COG2	NM_007357	human	genbank	57_37b	+1	reviewed	missense	c.1505	p.T502I	0.774	NULL	HMMPfam_COG2	-	no_errors	
COL5A2	1290	genome.wustl.edu	37	2	189904113	189904113	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	189904113	189904113	A	T	SNP	COL5A2	NM_000393	human	genbank	57_37b	-1	reviewed	silent	c.3810	p.A1270	0.855	HMMSmart_COLFI	HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors	
COX4I2	84701	genome.wustl.edu	37	20	30227892	30227892	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30227892	30227892	A	G	SNP	COX4I2	NM_032609	human	genbank	57_37b	+1	reviewed	missense	c.239	p.K80R	1.000	HMMPfam_COX4,superfamily_COX4	HMMPfam_COX4,superfamily_COX4	-	no_errors	
CSMD3	114788	genome.wustl.edu	37	8	113353841	113353841	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	113353841	113353841	C	G	SNP	CSMD3	NM_198123	human	genbank	57_37b	-1	validated	missense	c.6517	p.E2173Q	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
CTNNA3	29119	genome.wustl.edu	37	10	69299408	69299408	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	69299408	69299408	T	A	SNP	CTNNA3	NM_001127384	human	genbank	57_37b	-1	validated	silent	c.312	p.S104	1.000	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	-	no_errors	
CUBN	8029	genome.wustl.edu	37	10	16893262	16893262	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	16893262	16893262	C	G	SNP	CUBN	NM_001081	human	genbank	57_37b	-1	reviewed	missense	c.9635	p.R3212T	0.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_EGF_2,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors	
DHRS12	79758	genome.wustl.edu	37	13	52345531	52345531	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	52345531	52345531	C	G	SNP	DHRS12	NM_001031719	human	genbank	57_37b	-1	provisional	missense	c.660	p.Q220H	0.000	NULL	superfamily_NAD(P)-bd	-	no_errors	
DNAH11	8701	genome.wustl.edu	37	7	21775324	21775337	+	Frame_Shift_Del	DEL	GGAAAACCTCTAAT	GGAAAACCTCTAAT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	GGAAAACCTCTAAT	GGAAAACCTCTAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	21775324	21775337	GGAAAACCTCTAAT	-	DEL	DNAH11	NM_003777	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.7528_7541	p.G2510fs	0.701:0.853:0.824:0.840:0.832:0.298:1.000:0.999:0.000:0.002:0.112:0.005:0.977:1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	(deletion:cds_exon[21775258,21775462])	no_errors	
DNAJC6	9829	genome.wustl.edu	37	1	65860643	65860643	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65860643	65860643	T	A	SNP	DNAJC6	NM_014787	human	genbank	57_37b	+1	validated	missense	c.1795	p.F599I	1.000	NULL	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_PTEN_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ	-	no_errors	
DNMBP	23268	genome.wustl.edu	37	10	101643811	101643811	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	101643811	101643811	T	G	SNP	DNMBP	NM_015221	human	genbank	57_37b	-1	validated	missense	c.3954	p.K1318N	1.000	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,HMMSmart_SM00721,HMMPfam_BAR	-	no_errors	
DPY19L2	283417	genome.wustl.edu	37	12	63964604	63964604	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	63964604	63964604	G	-	DEL	DPY19L2	NM_173812	human	genbank	57_37b	-1	validated	frame_shift_del	c.1934	p.A645fs	1.000	HMMPfam_DUF2211	HMMPfam_DUF2211	(deletion:cds_exon[63964538,63964637])	no_errors	
DVL1	1855	genome.wustl.edu	37	1	1273446	1273446	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1273446	1273446	T	A	SNP	DVL1	NM_004421	human	genbank	57_37b	-1	reviewed	missense	c.1550	p.Y517F	1.000	superfamily_SSF46785	HMMPfam_DIX,HMMSmart_DAX,HMMPfam_Dishevelled,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SSF46785,HMMPfam_DEP,HMMSmart_DEP	-	no_errors	
DZIP3	9666	genome.wustl.edu	37	3	108355480	108355480	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	108355480	108355480	A	T	SNP	DZIP3	NM_014648	human	genbank	57_37b	+1	validated	missense	c.936	p.K312N	0.996	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors	
ECE2	9718	genome.wustl.edu	37	3	183994723	183994723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183994723	183994723	C	T	SNP	ECE2	NM_014693	human	genbank	57_37b	+1	validated	missense	c.524	p.T175M	0.892	NULL	"superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M13_N,HMMPfam_Peptidase_M13"	-	no_errors	
EIF2C3	192669	genome.wustl.edu	37	1	36411332	36411332	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	36411332	36411332	G	T	SNP	EIF2C3	NM_024852	human	genbank	57_37b	+1	reviewed	missense	c.59	p.R20I	1.000	NULL	HMMPfam_DUF1785,superfamily_SSF101690,HMMPfam_PAZ,superfamily_RNaseH_fold,HMMPfam_Piwi	-	no_errors	
ENSG00000222806	0	genome.wustl.edu	37	6	153741613	153741613	+	RNA	SNP	G	G	C	rs270288	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	153741613	153741613	G	C	SNP	ENSG00000222806	ENST00000410874	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.032	-	-	-		
ENSG00000246087	0	genome.wustl.edu	37	17	1130054	1130055	+	RNA	INS	-	-	TA	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	1130054	1130055	-	TA	INS	ENSG00000246087	ENST00000501121	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.009:0.010	-	-	-	no_errors	
ENSG00000247143	0	genome.wustl.edu	37	14	102606230	102606230	+	RNA	SNP	A	A	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	102606230	102606230	A	C	SNP	ENSG00000247143	ENST00000499851	human	ensembl	57_37b	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	
ENSG00000247300	0	genome.wustl.edu	37	13	36049080	36049080	+	RNA	SNP	T	T	G	rs9565317	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	36049080	36049080	T	G	SNP	ENSG00000247300	ENST00000501672	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.995	-	-	-		
EPS15	2060	genome.wustl.edu	37	1	51912687	51912687	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	51912687	51912687	C	A	SNP	EPS15	NM_001981	human	genbank	57_37b	-1	reviewed	missense	c.742	p.V248F	1.000	superfamily_EF-hand,HMMSmart_SM00027,HMMSmart_SM00054,PatternScan_EF_HAND_1	superfamily_EF-hand,HMMSmart_SM00027,HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMSmart_SM00726	-	no_errors	
ETFA	2108	genome.wustl.edu	37	15	76578063	76578063	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	76578063	76578063	T	A	SNP	ETFA	NM_000126	human	genbank	57_37b	-1	reviewed	silent	c.579	p.P193	0.987	superfamily_Adenine nucleotide alpha hydrolases-like	superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_ETF,superfamily_DHS-like NAD/FAD-binding domain,HMMPfam_ETF_alpha,PatternScan_ETF_ALPHA	-	no_errors	
FAM135B	51059	genome.wustl.edu	37	8	139209858	139209858	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	139209858	139209858	G	A	SNP	FAM135B	NM_015912	human	genbank	57_37b	-1	validated	nonsense	c.724	p.R242*	1.000	NULL	superfamily_alpha/beta-Hydrolases,HMMPfam_DUF676	-	no_errors	
FANCM	57697	genome.wustl.edu	37	14	45644732	45644732	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	45644732	45644732	A	G	SNP	FANCM	NM_020937	human	genbank	57_37b	+1	reviewed	silent	c.2775	p.T925	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C,superfamily_Restriction endonuclease-like,HMMPfam_ERCC4,superfamily_RuvA domain 2-like	-	no_errors	
FGD3	89846	genome.wustl.edu	37	9	95738615	95738615	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	95738615	95738615	G	T	SNP	FGD3	NM_001083536	human	genbank	57_37b	+1	validated	missense	c.77	p.S26I	0.001	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	-	no_errors	
FLNA	2316	genome.wustl.edu	37	X	153586901	153586901	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153586901	153586901	C	T	SNP	FLNA	NM_001110556	human	genbank	57_37b	-1	reviewed	missense	c.4510	p.D1504N	0.999	HMMPfam_Filamin,superfamily_E set domains,HMMSmart_SM00557	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_E set domains,HMMPfam_Filamin,HMMSmart_SM00557	-	no_errors	
FMN2	56776	genome.wustl.edu	37	1	240601454	240601454	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	240601454	240601454	C	T	SNP	FMN2	NM_020066	human	genbank	57_37b	+1	validated	silent	c.5004	p.F1668	1.000	HMMSmart_FH2,superfamily_FH2_actin_bd,HMMPfam_FH2	HMMSmart_FH2,HMMPfam_Drf_FH1,superfamily_FH2_actin_bd,HMMPfam_FH2	-	no_errors	
GDPD5	81544	genome.wustl.edu	37	11	75167801	75167801	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	75167801	75167801	C	A	SNP	GDPD5	NM_030792	human	genbank	57_37b	-1	validated	splice_site	c.375+1	e4+1	1.000	-	-	-	no_errors	
GIMAP8	155038	genome.wustl.edu	37	7	150171337	150171337	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150171337	150171337	C	T	SNP	GIMAP8	NM_175571	human	genbank	57_37b	+1	reviewed	missense	c.920	p.S307L	0.000	superfamily_SSF52540,HMMPfam_AIG1	superfamily_SSF52540,HMMPfam_AIG1	-	no_errors	
GRIK3	2899	genome.wustl.edu	37	1	37270745	37270745	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	37270745	37270745	C	G	SNP	GRIK3	NM_000831	human	genbank	57_37b	-1	reviewed	missense	c.2408	p.S803T	1.000	superfamily_SSF53850,HMMPfam_Lig_chan,superfamily_SSF55620	superfamily_SSF53822,HMMPfam_ANF_receptor,HMMSmart_PBPe,superfamily_SSF53850,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,superfamily_SSF55620	-	no_errors	
HDAC2	3066	genome.wustl.edu	37	6	114274578	114274578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	114274578	114274578	G	A	SNP	HDAC2	NM_001527	human	genbank	57_37b	-1	reviewed	missense	c.784	p.H262Y	1.000	superfamily_SSF52768,HMMPfam_Hist_deacetyl	superfamily_SSF52768,HMMPfam_Hist_deacetyl	-	no_errors	
HEATR5A	25938	genome.wustl.edu	37	14	31787465	31787465	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	31787465	31787465	C	G	SNP	HEATR5A	NM_015473	human	genbank	57_37b	-1	validated	missense	c.3124	p.E1042Q	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
HHIPL2	79802	genome.wustl.edu	37	1	222717112	222717112	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	222717112	222717112	A	T	SNP	HHIPL2	NM_024746	human	genbank	57_37b	-1	validated	missense	c.741	p.D247E	0.984	superfamily_Quino_gluc_DH	superfamily_Quino_gluc_DH	-	no_errors	
HIAT1	64645	genome.wustl.edu	37	1	100535194	100535194	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	100535194	100535194	G	C	SNP	HIAT1	NM_033055	human	genbank	57_37b	+1	validated	missense	c.844	p.V282L	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1,PatternScan_SUGAR_TRANSPORT_1	-	no_errors	
HIST1H1T	3010	genome.wustl.edu	37	6	26108318	26108318	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26108318	26108318	A	G	SNP	HIST1H1T	NM_005323	human	genbank	57_37b	-1	reviewed	missense	c.4	p.S2P	0.994	NULL	superfamily_SSF46785,HMMSmart_H15,HMMPfam_Linker_histone	-	no_errors	
HIST1H2BB	3018	genome.wustl.edu	37	6	26043523	26043523	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26043523	26043523	C	G	SNP	HIST1H2BB	NM_021062	human	genbank	57_37b	-1	reviewed	missense	c.363	p.K121N	1.000	superfamily_Histone-fold,HMMSmart_H2B	superfamily_Histone-fold,HMMSmart_H2B,HMMPfam_Histone,PatternScan_HISTONE_H2B	-	no_errors	
HIST1H2BB	3018	genome.wustl.edu	37	6	26043604	26043604	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26043604	26043604	C	G	SNP	HIST1H2BB	NM_021062	human	genbank	57_37b	-1	reviewed	missense	c.282	p.E94D	1.000	HMMSmart_H2B,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_H2B,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors	
HIST1H3A	8350	genome.wustl.edu	37	6	26020728	26020728	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26020728	26020728	C	T	SNP	HIST1H3A	NM_003529	human	genbank	57_37b	+1	reviewed	missense	c.11	p.T4I	0.989	superfamily_Histone-fold	superfamily_Histone-fold,PatternScan_HISTONE_H3_1,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	-	no_errors	
HIST1H3I	8354	genome.wustl.edu	37	6	27840056	27840056	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27840056	27840056	C	A	SNP	HIST1H3I	NM_003533	human	genbank	57_37b	-1	reviewed	missense	c.38	p.G13V	1.000	superfamily_Histone-fold	superfamily_Histone-fold,PatternScan_HISTONE_H3_1,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	-	no_errors	
HYAL4	23553	genome.wustl.edu	37	7	123516844	123516844	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	123516844	123516844	G	A	SNP	HYAL4	NM_012269	human	genbank	57_37b	+1	reviewed	missense	c.1081	p.D361N	0.999	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors	
IMPA1	3612	genome.wustl.edu	37	8	82598029	82598029	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	82598029	82598029	C	G	SNP	IMPA1	NM_001144878	human	genbank	57_37b	-1	reviewed	missense	c.122	p.S41T	0.002	NULL	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase,PatternScan_IMP_1,PatternScan_IMP_2	-	no_errors	
INSL3	3640	genome.wustl.edu	37	19	17932138	17932138	+	Missense_Mutation	SNP	T	C	C	rs6523	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17932138	17932138	T	C	SNP	INSL3	NM_005543	human	genbank	57_37b	-1	reviewed	missense	c.178	p.T60A	0.000	superfamily_Insulin-like,HMMPfam_Insulin,HMMSmart_SM00078	superfamily_Insulin-like,HMMPfam_Insulin,HMMSmart_SM00078,PatternScan_INSULIN	-		
JUB	84962	genome.wustl.edu	37	14	23451265	23451265	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23451265	23451265	C	A	SNP	JUB	NM_032876	human	genbank	57_37b	-1	validated	missense	c.211	p.D71Y	0.946	NULL	HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_SSF57716	-	no_errors	
KCNA10	3744	genome.wustl.edu	37	1	111060445	111060445	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111060445	111060445	T	A	SNP	KCNA10	NM_005549	human	genbank	57_37b	-1	reviewed	missense	c.965	p.E322V	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans	-	no_errors	
KCNB1	3745	genome.wustl.edu	37	20	47989961	47989961	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	47989961	47989961	C	T	SNP	KCNB1	NM_004975	human	genbank	57_37b	-1	reviewed	silent	c.2136	p.T712	0.000	HMMPfam_Kv2channel	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Kv2channel	-	no_errors	
KCNQ5	56479	genome.wustl.edu	37	6	73904256	73904256	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	73904256	73904256	G	A	SNP	KCNQ5	NM_019842	human	genbank	57_37b	+1	reviewed	missense	c.1918	p.A640T	0.998	HMMPfam_KCNQ_channel	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_KCNQ_channel	-	no_errors	
KCNV2	169522	genome.wustl.edu	37	9	2729625	2729625	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	2729625	2729625	C	T	SNP	KCNV2	NM_133497	human	genbank	57_37b	+1	reviewed	silent	c.1536	p.R512	0.000	superfamily_SSF81324	superfamily_BTB/POZ_fold,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans	-	no_errors	
KLHL24	54800	genome.wustl.edu	37	3	183390243	183390243	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183390243	183390243	A	G	SNP	KLHL24	NM_017644	human	genbank	57_37b	+1	validated	missense	c.1573	p.M525V	1.000	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	-	no_errors	
KLHL38	340359	genome.wustl.edu	37	8	124663967	124663967	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124663967	124663967	G	T	SNP	KLHL38	NM_001081675	human	genbank	57_37b	-1	validated	silent	c.1200	p.S400	0.986	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMSmart_SM00612,HMMPfam_Kelch_1	-	no_errors	
KLK15	55554	genome.wustl.edu	37	19	51330004	51330004	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51330004	51330004	G	T	SNP	KLK15	NM_017509	human	genbank	57_37b	-1	reviewed	missense	c.491	p.P164Q	0.534	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS	-	no_errors	
LDLR	3949	genome.wustl.edu	37	19	11216199	11216199	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11216199	11216199	G	T	SNP	LDLR	NM_000527	human	genbank	57_37b	+1	reviewed	missense	c.617	p.S206I	0.999	HMMPfam_Ldl_recept_a,superfamily_LDL receptor-like module,HMMSmart_SM00192	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b	-	no_errors	
LILRA6	79168	genome.wustl.edu	37	19	54744774	54744774	+	Nonsense_Mutation	SNP	G	G	T	rs4368270	byHapMap	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54744774	54744774	G	T	SNP	LILRA6	NM_024318	human	genbank	57_37b	-1	validated	nonsense	c.888	p.C296*	0.864	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	superfamily_SSF48726,HMMPfam_ig,HMMSmart_IG	-		
LOC100132941	0	genome.wustl.edu	37	16	33006399	33006399	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	33006399	33006399	G	-	DEL	LOC100132941	XM_001718037	human	genbank	57_37b	+1	model	frame_shift_del	c.31	p.V11fs	0.926	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406	(deletion:cds_exon[33006369,33006414])	no_errors	
LOC100287763	0	genome.wustl.edu	37	3	98244069	98244069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	98244069	98244069	C	T	SNP	LOC100287763	XM_002342388	human	genbank	57_37b	+1	model	missense	c.382	p.H128Y	0.994	NULL	NULL	-	no_errors	
LOC100289074	0	genome.wustl.edu	37	17	81083419	81083419	+	Missense_Mutation	SNP	G	G	A	rs28399067	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	81083419	81083419	G	A	SNP	LOC100289074	XM_002343591	human	genbank	57_37b	+1	model	missense	c.1316	p.R439H	0.199	NULL	NULL	-		
LOC648809	648809	genome.wustl.edu	37	15	84790350	84790350	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	84790350	84790350	G	A	SNP	LOC648809	XM_001713991	human	genbank	57_37b	+1	model	missense	c.409	p.G137S	1.000	superfamily_Translation proteins	superfamily_Translation proteins	-	no_errors	
LPGAT1	9926	genome.wustl.edu	37	1	211924401	211924401	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	211924401	211924401	G	A	SNP	LPGAT1	NM_014873	human	genbank	57_37b	-1	validated	missense	c.863	p.P288L	1.000	NULL	superfamily_Glycerol-3-phosphate (1)-acyltransferase,HMMSmart_SM00563	-	no_errors	
LRFN5	145581	genome.wustl.edu	37	14	42356845	42356845	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	42356845	42356845	C	G	SNP	LRFN5	NM_152447	human	genbank	57_37b	+1	validated	missense	c.1017	p.N339K	0.999	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	HMMSmart_LRRNT,superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1,HMMSmart_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_fn3,superfamily_FN_III-like	-	no_errors	
LSM5	23658	genome.wustl.edu	37	7	32529929	32529929	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	32529929	32529929	T	A	SNP	LSM5	ENST00000223084	human	ensembl	57_37b	-1	known	missense	c.49	p.N17Y	0.997	NULL	NULL	-	no_errors	
LYST	1130	genome.wustl.edu	37	1	235922289	235922289	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	235922289	235922289	T	A	SNP	LYST	NM_000081	human	genbank	57_37b	-1	reviewed	silent	c.6864	p.R2288	0.006	NULL	PatternScan_COPPER_BLUE,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
MARCH10	162333	genome.wustl.edu	37	17	60814611	60814611	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	60814611	60814611	C	A	SNP	MARCH10	NM_001100875	human	genbank	57_37b	-1	validated	silent	c.618	p.S206	0.003	NULL	superfamily_RING/U-box,HMMSmart_SM00744,HMMPfam_zf-C3HC4	-	no_errors	
MGAT5B	146664	genome.wustl.edu	37	17	74928858	74928858	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74928858	74928858	G	T	SNP	MGAT5B	NM_198955	human	genbank	57_37b	+1	validated	splice_site	c.1455+1	e10+1	1.000	-	-	-	no_errors	
MOSC2	54996	genome.wustl.edu	37	1	220928454	220928454	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220928454	220928454	C	G	SNP	MOSC2	NM_017898	human	genbank	57_37b	+1	provisional	missense	c.438	p.H146Q	0.000	superfamily_PK beta-barrel domain-like,HMMPfam_MOSC_N	superfamily_PK beta-barrel domain-like,HMMPfam_MOSC_N,HMMPfam_MOSC	-	no_errors	
MRFAP1	93621	genome.wustl.edu	37	4	6642829	6642829	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	6642829	6642829	C	-	DEL	MRFAP1	NM_033296	human	genbank	57_37b	+1	provisional	frame_shift_del	c.240	p.H81fs	0.000	NULL	NULL	(deletion:cds_exon[6642590,6642973])	no_errors	
MSL1	339287	genome.wustl.edu	37	17	38290099	38290099	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	38290099	38290099	C	T	SNP	MSL1	NM_001012241	human	genbank	57_37b	+1	validated	silent	c.912	p.T304	1.000	NULL	NULL	-	no_errors	
MST4	51765	genome.wustl.edu	37	X	131202597	131202597	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	131202597	131202597	A	G	SNP	MST4	NM_016542	human	genbank	57_37b	+1	reviewed	silent	c.597	p.K199	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	-	no_errors	
MUC3A	4584	genome.wustl.edu	37	7	100552017	100552017	+	Silent	SNP	C	C	T	rs9691167	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100552017	100552017	C	T	SNP	MUC3A	XM_001725354	human	genbank	57_37b	+1	model	silent	c.2598	p.F866	0.000	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-		
MXRA5	25878	genome.wustl.edu	37	X	3241923	3241923	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	3241923	3241923	A	G	SNP	MXRA5	NM_015419	human	genbank	57_37b	-1	validated	silent	c.1803	p.A601	0.000	HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Immunoglobulin,HMMPfam_ig	HMMSmart_SM00013,superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set	-	no_errors	
MYT1L	23040	genome.wustl.edu	37	2	1946873	1946873	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	1946873	1946873	C	T	SNP	MYT1L	NM_015025	human	genbank	57_37b	-1	validated	missense	c.386	p.R129Q	0.990	NULL	superfamily_SSF103637,HMMPfam_zf-C2HC,HMMPfam_MYT1,PatternScan_EF_HAND_1	-	no_errors	
NAALAD2	10003	genome.wustl.edu	37	11	89916133	89916133	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	89916133	89916133	G	A	SNP	NAALAD2	NM_005467	human	genbank	57_37b	+1	reviewed	missense	c.1990	p.A664T	1.000	superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_TFR_dimer	superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M28,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_TFR_dimer	-	no_errors	
NCSTN	23385	genome.wustl.edu	37	1	160314596	160314596	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160314596	160314596	C	G	SNP	NCSTN	NM_015331	human	genbank	57_37b	+1	reviewed	missense	c.170	p.T57S	1.000	NULL	superfamily_Zn-dependent exopeptidases,HMMPfam_Nicastrin,PatternScan_WD_REPEATS_1	-	no_errors	
NDRG4	65009	genome.wustl.edu	37	16	58543214	58543214	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	58543214	58543214	C	G	SNP	NDRG4	NM_001130487	human	genbank	57_37b	+1	reviewed	missense	c.979	p.L327V	1.000	superfamily_SSF53474,HMMPfam_Ndr	superfamily_SSF53474,HMMPfam_Ndr	-	no_errors	
NFKB2	4791	genome.wustl.edu	37	10	104159031	104159050	+	Splice_Site	DEL	GCCTGTATCCACAGGTGGCA	GCCTGTATCCACAGGTGGCA	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	GCCTGTATCCACAGGTGGCA	GCCTGTATCCACAGGTGGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104159031	104159050	GCCTGTATCCACAGGTGGCA	-	DEL	NFKB2	NM_001077494	human	genbank	57_37b	+1	validated	splice_site_del	c.1118-14_1118-1	e12-1	0.004:0.034:0.037:0.037:0.001:0.001:0.002:0.075:0.921:0.987:0.988:1.000:1.000:1.000:1.000:0.975:0.997:1.000:1.000:1.000	-	-	(deletion:intron[104158622,104159044], cds_exon[104159045,104159254])	no_errors	
NFKB2	4791	genome.wustl.edu	37	10	104160110	104160118	+	In_Frame_Del	DEL	GCTCTGCTG	GCTCTGCTG	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	GCTCTGCTG	GCTCTGCTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104160110	104160118	GCTCTGCTG	-	DEL	NFKB2	NM_001077494	human	genbank	57_37b	+1	validated	in_frame_del	c.1660_1668	p.ALL554in_frame_del	0.065:0.064:0.010:0.983:1.000:1.000:1.000:1.000:1.000	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_p53-like transcription factors,HMMPfam_RHD,PatternScan_REL_1,superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	(deletion:cds_exon[104160035,104160248])	no_errors	
NFKB2	4791	genome.wustl.edu	37	10	104160244	104160249	+	Frame_Shift_Del	DEL	TGAGGG	TGAGGG	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	TGAGGG	TGAGGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104160244	104160249	TGAGGG	-	DEL	NFKB2	NM_001077494	human	genbank	57_37b	+1	validated	frame_shift_del	c.1794_1798	p.F598fs	0.945:0.968:0.979:0.976:1.000	superfamily_Ankyrin repeat	PatternScan_REL_1,HMMPfam_Death,HMMSmart_SM00005,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_TIG,HMMSmart_SM00429,superfamily_p53-like transcription factors,superfamily_DEATH domain,HMMPfam_RHD,superfamily_E set domains	(deletion:cds_exon[104160035,104160248], intron[104160249,104160411])	no_errors	
NPDC1	56654	genome.wustl.edu	37	9	139935565	139935565	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139935565	139935565	C	T	SNP	NPDC1	NM_015392	human	genbank	57_37b	-1	validated	missense	c.334	p.G112R	0.007	HMMPfam_NPDC1	HMMPfam_NPDC1	-	no_errors	
NR5A2	2494	genome.wustl.edu	37	1	200017390	200017390	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	200017390	200017390	T	A	SNP	NR5A2	NM_205860	human	genbank	57_37b	+1	validated	missense	c.554	p.L185H	1.000	superfamily_Nuclear receptor ligand-binding domain	HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
NSFL1C	55968	genome.wustl.edu	37	20	1434913	1434913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1434913	1434913	G	A	SNP	NSFL1C	NM_016143	human	genbank	57_37b	-1	reviewed	missense	c.482	p.P161L	1.000	NULL	superfamily_UBA-like,superfamily_NSFL1 (p97 ATPase) cofactor p47 SEP domain,HMMSmart_SM00553,HMMPfam_SEP,superfamily_Ubiquitin-like,HMMPfam_UBX,HMMSmart_SM00166	-	no_errors	
OR10Q1	219960	genome.wustl.edu	37	11	57996010	57996010	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	57996010	57996010	C	A	SNP	OR10Q1	NM_001004471	human	genbank	57_37b	-1	validated	missense	c.338	p.S113I	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR3A1	4994	genome.wustl.edu	37	17	3195848	3195848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	3195848	3195848	G	A	SNP	OR3A1	NM_002550	human	genbank	57_37b	-1	validated	missense	c.29	p.T10I	0.171	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR5I1	10798	genome.wustl.edu	37	11	55703812	55703812	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55703812	55703812	C	T	SNP	OR5I1	NM_006637	human	genbank	57_37b	-1	reviewed	missense	c.65	p.R22H	0.003	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PAGE2	203569	genome.wustl.edu	37	X	55117826	55117826	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	55117826	55117826	A	G	SNP	PAGE2	NM_207339	human	genbank	57_37b	+1	provisional	silent	c.255	p.G85	0.000	HMMPfam_GAGE	HMMPfam_GAGE	-	no_errors	
PCM1	5108	genome.wustl.edu	37	8	17869182	17869182	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	17869182	17869182	C	G	SNP	PCM1	NM_006197	human	genbank	57_37b	+1	validated	missense	c.5357	p.S1786C	1.000	NULL	PatternScan_MOLYBDOPTERIN_EUK	-	no_errors	
PI4KA	5297	genome.wustl.edu	37	22	21173951	21173951	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	21173951	21173951	C	G	SNP	PI4KA	NM_058004	human	genbank	57_37b	-1	reviewed	missense	c.593	p.S198T	1.000	NULL	superfamily_ARM repeat,HMMSmart_SM00145,HMMPfam_PI3Ka,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIK3CD	5293	genome.wustl.edu	37	1	9777151	9777151	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	9777151	9777151	C	G	SNP	PIK3CD	NM_005026	human	genbank	57_37b	+1	validated	silent	c.915	p.P305	0.315	NULL	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PLA2G2C	391013	genome.wustl.edu	37	1	20501650	20501650	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	20501650	20501650	G	A	SNP	PLA2G2C	NM_001105572	human	genbank	57_37b	-1	provisional	missense	c.38	p.S13L	0.000	NULL	PatternScan_PA2_HIS,HMMPfam_Phospholip_A2_1,HMMSmart_PA2c,superfamily_PhospholipaseA2,PatternScan_PA2_ASP	-	no_errors	
PPP1R13L	10848	genome.wustl.edu	37	19	45900186	45900186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	45900186	45900186	C	T	SNP	PPP1R13L	NM_001142502	human	genbank	57_37b	-1	validated	missense	c.329	p.S110N	0.996	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
PPY2	23614	genome.wustl.edu	37	17	26574521	26574521	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	26574521	26574521	G	T	SNP	PPY2	ENST00000247030	human	ensembl	57_37b	+1	known	missense	c.52	p.A18S	0.999	NULL	NULL	-	no_errors	
PVRIG	79037	genome.wustl.edu	37	7	99818572	99818572	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99818572	99818572	G	A	SNP	PVRIG	NM_024070	human	genbank	57_37b	+1	validated	missense	c.679	p.A227T	0.000	NULL	NULL	-	no_errors	
RAX	30062	genome.wustl.edu	37	18	56940307	56940307	+	Missense_Mutation	SNP	G	G	T	rs2271733	byCluster;byFrequency;by1000genomes	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	56940307	56940307	G	T	SNP	RAX	NM_013435	human	genbank	57_37b	-1	reviewed	missense	c.132	p.D44E	0.995	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMPfam_OAR	-		
RGS3	5998	genome.wustl.edu	37	9	116356374	116356374	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	116356374	116356374	T	C	SNP	RGS3	NM_144489	human	genbank	57_37b	+1	reviewed	missense	c.175	p.S59P	1.000	NULL	superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	-	no_errors	
RHO	6010	genome.wustl.edu	37	3	129251435	129251446	+	In_Frame_Del	DEL	CATGGTCATCAT	CATGGTCATCAT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	CATGGTCATCAT	CATGGTCATCAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	129251435	129251446	CATGGTCATCAT	-	DEL	RHO	NM_000539	human	genbank	57_37b	+1	reviewed	in_frame_del	c.756_767	p.IMVI256in_frame_del	0.950:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_Rhodopsin_N,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	(deletion:cds_exon[129251376,129251615])	no_errors	
RIN1	9610	genome.wustl.edu	37	11	66103801	66103801	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66103801	66103801	G	C	SNP	RIN1	NM_004292	human	genbank	57_37b	-1	validated	missense	c.73	p.L25V	0.042	NULL	superfamily_SH2 domain,HMMSmart_SM00252,superfamily_VPS9 domain (Pfam 02204),HMMSmart_SM00167,HMMPfam_VPS9,HMMPfam_RA,HMMSmart_SM00314	-	no_errors	
SELL	6402	genome.wustl.edu	37	1	169670813	169670813	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169670813	169670813	G	T	SNP	SELL	NM_000655	human	genbank	57_37b	-1	reviewed	missense	c.969	p.F323L	0.627	NULL	HMMSmart_CLECT,superfamily_C-type_lectin_fold,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors	
SIM1	6492	genome.wustl.edu	37	6	100897470	100897470	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	100897470	100897470	G	T	SNP	SIM1	NM_005068	human	genbank	57_37b	-1	reviewed	missense	c.454	p.Q152K	1.000	superfamily_SSF55785	HMMPfam_HLH,HMMSmart_HLH,HMMPfam_PAS,HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS_3,HMMSmart_PAC,HMMPfam_SIM_C	-	no_errors	
SLC12A1	6557	genome.wustl.edu	37	15	48559801	48559801	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48559801	48559801	C	T	SNP	SLC12A1	NM_000338	human	genbank	57_37b	+1	validated	missense	c.2198	p.A733V	0.675	NULL	HMMPfam_AA_permease_N,HMMPfam_AA_permease	-	no_errors	
SLCO1C1	53919	genome.wustl.edu	37	12	20858927	20858927	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	20858927	20858927	C	T	SNP	SLCO1C1	NM_017435	human	genbank	57_37b	+1	reviewed	missense	c.316	p.L106F	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_OATP	superfamily_MFS_gen_substrate_transporter,HMMPfam_OATP,superfamily_SSF100895,HMMSmart_KAZAL,HMMPfam_Kazal_2	-	no_errors	
SMC1B	27127	genome.wustl.edu	37	22	45750849	45750862	+	Frame_Shift_Del	DEL	CTCTTGAAACTTGT	CTCTTGAAACTTGT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	CTCTTGAAACTTGT	CTCTTGAAACTTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	45750849	45750862	CTCTTGAAACTTGT	-	DEL	SMC1B	NM_148674	human	genbank	57_37b	-1	validated	frame_shift_del	c.3108_3095	p.D1032fs	0.990:1.000:1.000:0.746:1.000:1.000:0.995:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_SSF52540,HMMPfam_SMC_N	superfamily_SSF52540,HMMPfam_SMC_N,superfamily_SMC_hinge,HMMPfam_SMC_hinge	(deletion:cds_exon[45750839,45750995])	no_errors	
SMTNL1	219537	genome.wustl.edu	37	11	57313409	57313409	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	57313409	57313409	G	T	SNP	SMTNL1	NM_001105565	human	genbank	57_37b	+1	provisional	nonsense	c.1027	p.E343*	0.235	NULL	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	-	no_errors	
SNORA66	26782	genome.wustl.edu	37	1	93306317	93306317	+	RNA	SNP	G	G	A	rs10874744	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	93306317	93306317	G	A	SNP	SNORA66	NR_002444	human	genbank	57_37b	+1	reviewed	rna	NULL	NULL	0.777	-	-	-		
SPAG17	200162	genome.wustl.edu	37	1	118623811	118623811	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	118623811	118623811	T	C	SNP	SPAG17	NM_206996	human	genbank	57_37b	-1	validated	missense	c.2122	p.N708D	0.000	NULL	NULL	-	no_errors	
SPATA17	128153	genome.wustl.edu	37	1	217842375	217842375	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	217842375	217842375	G	T	SNP	SPATA17	NM_138796	human	genbank	57_37b	+1	provisional	missense	c.241	p.V81L	0.998	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
SPEG	10290	genome.wustl.edu	37	2	220329218	220329229	+	In_Frame_Del	DEL	GCTGTGCCGGCT	GCTGTGCCGGCT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	GCTGTGCCGGCT	GCTGTGCCGGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	220329218	220329229	GCTGTGCCGGCT	-	DEL	SPEG	NM_005876	human	genbank	57_37b	+1	validated	in_frame_del	c.2769_2780	p.LCRL924in_frame_del	1.000:0.998:0.997:0.987:0.986:0.984:0.983:0.983:0.959:0.927:0.972:0.996	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00219	(deletion:cds_exon[220329155,220329330])	no_errors	
SRRM2	23524	genome.wustl.edu	37	16	2816694	2816694	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2816694	2816694	A	C	SNP	SRRM2	NM_016333	human	genbank	57_37b	+1	validated	missense	c.6165	p.R2055S	0.633	NULL	HMMPfam_cwf21	-	no_errors	
SRRT	51593	genome.wustl.edu	37	7	100485995	100485995	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100485995	100485995	C	G	SNP	SRRT	NM_015908	human	genbank	57_37b	+1	validated	missense	c.2546	p.P849R	1.000	HMMPfam_ARS2	HMMPfam_ARS2	-	no_errors	
ST18	9705	genome.wustl.edu	37	8	53084997	53085011	+	In_Frame_Del	DEL	CAGATACATTTTTTT	CAGATACATTTTTTT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	CAGATACATTTTTTT	CAGATACATTTTTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	53084997	53085011	CAGATACATTTTTTT	-	DEL	ST18	NM_014682	human	genbank	57_37b	-1	validated	in_frame_del	c.424_410	p.EKNVS137in_frame_del	0.000:0.001:0.002:0.000:0.000:0.002:0.023:0.067:0.186:0.204:0.193:0.990:0.994:0.996:0.999	NULL	superfamily_SSF103637,HMMPfam_zf-C2HC,HMMPfam_MYT1	(deletion:cds_exon[53084352,53085143])	no_errors	
STAT4	6775	genome.wustl.edu	37	2	191898277	191898277	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	191898277	191898277	T	A	SNP	STAT4	NM_003151	human	genbank	57_37b	-1	reviewed	missense	c.1791	p.L597F	0.916	superfamily_SSF55550,HMMPfam_SH2,HMMSmart_SH2	superfamily_STAT,HMMPfam_STAT_int,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_P53_like_DNA_bnd,superfamily_SSF55550,HMMPfam_SH2,HMMSmart_SH2	-	no_errors	
SUPT6H	6830	genome.wustl.edu	37	17	27028471	27028471	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27028471	27028471	C	G	SNP	SUPT6H	NM_003170	human	genbank	57_37b	+1	validated	missense	c.5009	p.A1670G	1.000	NULL	HMMPfam_Tex_N,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMSmart_SM00316,HMMPfam_S1,superfamily_SH2 domain,HMMSmart_SM00252	-	no_errors	
SYNGAP1	8831	genome.wustl.edu	37	6	33403338	33403347	+	Frame_Shift_Del	DEL	CCGAAAGAGA	CCGAAAGAGA	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	CCGAAAGAGA	CCGAAAGAGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	33403338	33403347	CCGAAAGAGA	-	DEL	SYNGAP1	NM_006772	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.710_719	p.E238fs	0.984:0.116:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMSmart_SM00233,superfamily_PH domain-like	HMMSmart_SM00233,superfamily_PH domain-like,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2,HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1	(deletion:cds_exon[33403292,33403390])	no_errors	
TAF6	6878	genome.wustl.edu	37	7	99707866	99707866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99707866	99707866	G	A	SNP	TAF6	NM_005641	human	genbank	57_37b	-1	reviewed	missense	c.1115	p.T372I	0.969	HMMPfam_DUF1546	superfamily_Histone-fold,HMMPfam_TAF,HMMSmart_SM00803,HMMPfam_DUF1546	-	no_errors	
TIA1	7072	genome.wustl.edu	37	2	70454946	70454946	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	70454946	70454946	G	A	SNP	TIA1	NM_022173	human	genbank	57_37b	-1	reviewed	missense	c.319	p.H107Y	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMSmart_SM00361	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RRM_1	-	no_errors	
TMEM66	51669	genome.wustl.edu	37	8	29924354	29924354	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	29924354	29924354	G	A	SNP	TMEM66	NM_016127	human	genbank	57_37b	-1	provisional	missense	c.781	p.P261S	0.998	HMMPfam_DUF1183	HMMPfam_DUF1183	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578265	7578265	A	G	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.584	p.I195T	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRAF7	84231	genome.wustl.edu	37	16	2226284	2226285	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2226284	2226285	AT	-	DEL	TRAF7	NM_032271	human	genbank	57_37b	+1	validated	frame_shift_del	c.1897_1898	p.M633fs	1.000:1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_RING/U-box,HMMPfam_zf-C3HC4,HMMSmart_SM00184,PatternScan_ZF_RING_1,superfamily_TRAF domain-like,HMMPfam_zf-TRAF,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	(deletion:cds_exon[2226266,2226385])	no_errors	
TRO	7216	genome.wustl.edu	37	X	54949939	54949939	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54949939	54949939	T	A	SNP	TRO	NM_001039705	human	genbank	57_37b	+1	reviewed	missense	c.974	p.I325K	0.404	NULL	HMMPfam_MAGE	-	no_errors	
TSPAN12	23554	genome.wustl.edu	37	7	120428909	120428909	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	120428909	120428909	G	A	SNP	TSPAN12	NM_012338	human	genbank	57_37b	-1	reviewed	nonsense	c.655	p.Q219*	1.000	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	-	no_errors	
TSPAN31	6302	genome.wustl.edu	37	12	58140421	58140421	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	58140421	58140421	A	G	SNP	TSPAN31	NM_005981	human	genbank	57_37b	+1	reviewed	missense	c.362	p.D121G	0.987	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin	-	no_errors	
TTC18	118491	genome.wustl.edu	37	10	75071672	75071672	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75071672	75071672	G	C	SNP	TTC18	NM_145170	human	genbank	57_37b	-1	validated	missense	c.1294	p.Q432E	0.158	NULL	HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1	-	no_errors	
UBA1	7317	genome.wustl.edu	37	X	47061807	47061807	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47061807	47061807	C	T	SNP	UBA1	NM_003334	human	genbank	57_37b	+1	reviewed	silent	c.960	p.F320	0.938	superfamily_MoeB	superfamily_MoeB,HMMPfam_ThiF,PatternScan_UBIQUITIN_ACTIVAT_1,HMMPfam_UBA_e1_thiolCys,PatternScan_UBIQUITIN_ACTIVAT_2,HMMPfam_UBACT,HMMPfam_UBA_e1_C	-	no_errors	
UBAP2	55833	genome.wustl.edu	37	9	33935827	33935827	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	33935827	33935827	C	T	SNP	UBAP2	ENST00000379225	human	ensembl	57_37b	-1	known	missense	c.878	p.S293N	0.000	NULL	NULL	-	no_errors	
UBQLN4	56893	genome.wustl.edu	37	1	156012608	156012608	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156012608	156012608	C	G	SNP	UBQLN4	NM_020131	human	genbank	57_37b	-1	provisional	missense	c.1223	p.S408T	1.000	HMMSmart_STI1	PatternScan_UBIQUITIN_1,superfamily_SSF54236,HMMSmart_UBQ,HMMPfam_ubiquitin,HMMSmart_STI1,superfamily_UBA_like,HMMPfam_UBA,HMMSmart_UBA	-	no_errors	
USP34	9736	genome.wustl.edu	37	2	61520625	61520625	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	61520625	61520625	G	C	SNP	USP34	NM_014709	human	genbank	57_37b	-1	validated	missense	c.4522	p.P1508A	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors	
VCX3B	425054	genome.wustl.edu	37	X	8434392	8434392	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	8434392	8434392	G	T	SNP	VCX3B	NM_001001888	human	genbank	57_37b	+1	reviewed	nonsense	c.619	p.E207*	0.909	NULL	NULL	-	no_errors	
VILL	50853	genome.wustl.edu	37	3	38039808	38039808	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38039808	38039808	C	A	SNP	VILL	NM_015873	human	genbank	57_37b	+1	reviewed	missense	c.895	p.R299S	0.994	superfamily_C-terminal gelsolin-like domain of Sec23/24,HMMSmart_SM00262,HMMPfam_Gelsolin	HMMSmart_SM00262,superfamily_Actin depolymerizing proteins,HMMPfam_Gelsolin,superfamily_C-terminal gelsolin-like domain of Sec23/24,PatternScan_CYTOCHROME_B5_1,superfamily_VHP Villin headpiece domain,HMMPfam_VHP,HMMSmart_SM00153	-	no_errors	
VNN3	55350	genome.wustl.edu	37	6	133047893	133047893	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	133047893	133047893	G	C	SNP	VNN3	ENST00000207771	human	ensembl	57_37b	-1	known	missense	c.794	p.A265G	0.627	superfamily_Carbon-nitrogen hydrolase	superfamily_Carbon-nitrogen hydrolase,HMMPfam_CN_hydrolase	-	no_errors	
VWA3B	200403	genome.wustl.edu	37	2	98834413	98834413	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	98834413	98834413	G	C	SNP	VWA3B	NM_144992	human	genbank	57_37b	+1	provisional	missense	c.1941	p.E647D	0.555	HMMSmart_SM00327,superfamily_vWA-like,HMMPfam_VWA	HMMSmart_SM00327,superfamily_vWA-like,HMMPfam_VWA	-	no_errors	
ZBED4	9889	genome.wustl.edu	37	22	50279086	50279086	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	50279086	50279086	G	A	SNP	ZBED4	NM_014838	human	genbank	57_37b	+1	validated	silent	c.1776	p.P592	0.803	HMMSmart_SM00614,HMMPfam_zf-BED	HMMSmart_SM00614,HMMPfam_zf-BED,HMMPfam_hATC	-	no_errors	
ZNF174	7727	genome.wustl.edu	37	16	3458760	3458760	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3458760	3458760	G	A	SNP	ZNF174	NM_003450	human	genbank	57_37b	+1	validated	silent	c.1065	p.T355	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF318	24149	genome.wustl.edu	37	6	43304909	43304909	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43304909	43304909	C	G	SNP	ZNF318	NM_014345	human	genbank	57_37b	-1	validated	missense	c.6827	p.S2276T	0.712	NULL	HMMSmart_SM00451,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF462	58499	genome.wustl.edu	37	9	109773238	109773238	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	109773238	109773238	A	G	SNP	ZNF462	NM_021224	human	genbank	57_37b	+1	validated	missense	c.7448	p.N2483S	0.000	superfamily_beta-sandwich domain of Sec23/24	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_beta-sandwich domain of Sec23/24	-	no_errors	
ZNF687	57592	genome.wustl.edu	37	1	151262465	151262465	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151262465	151262465	G	T	SNP	ZNF687	NM_020832	human	genbank	57_37b	+1	provisional	missense	c.2946	p.M982I	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZNF774	342132	genome.wustl.edu	37	15	90904480	90904482	+	In_Frame_Del	DEL	CAT	CAT	-	novel	unknown	TCGA-A7-A0DA-01	TCGA-A7-A0DA-01	CAT	CAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	90904480	90904482	CAT	-	DEL	ZNF774	NM_001004309	human	genbank	57_37b	+1	validated	in_frame_del	c.1417_1419	p.H473in_frame_del	0.305:0.665:0.813	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	(deletion:cds_exon[90903275,90904515])	no_errors	
