Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ACACB	32	genome.wustl.edu	37	12	109704092	109704092	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	109704092	109704092	C	A	SNP	ACACB	NM_001093	human	genbank	57_37b	+1	reviewed	missense	c.7302	p.S2434R	0.999	NULL	HMMPfam_CPSase_L_chain,superfamily_PreATP-grasp domain,superfamily_Glutathione synthetase ATP-binding domain-like,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,superfamily_Rudiment single hybrid motif,HMMPfam_Biotin_carb_C,superfamily_Single hybrid motif,HMMPfam_Biotin_lipoyl,HMMPfam_ACC_central,superfamily_ClpP/crotonase,HMMPfam_Carboxyl_trans	-	no_errors	
ADAMDEC1	27299	genome.wustl.edu	37	8	24256522	24256522	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	24256522	24256522	A	G	SNP	ADAMDEC1	NM_014479	human	genbank	57_37b	+1	validated	missense	c.898	p.K300E	0.000	superfamily_SSF55486,HMMPfam_Reprolysin	PatternScan_CYSTEINE_SWITCH,PatternScan_DISINTEGRIN_1,HMMPfam_Pep_M12B_propep,superfamily_SSF55486,HMMPfam_Reprolysin,PatternScan_ZINC_PROTEASE,HMMPfam_Disintegrin,HMMSmart_DISIN	-	no_errors	
ANK3	288	genome.wustl.edu	37	10	61830358	61830358	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	61830358	61830358	C	A	SNP	ANK3	NM_020987	human	genbank	57_37b	-1	reviewed	missense	c.10281	p.L3427F	0.998	NULL	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_ZU5,HMMSmart_ZU5,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors	
AOC3	8639	genome.wustl.edu	37	17	41003862	41003862	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	41003862	41003862	C	T	SNP	AOC3	NM_003734	human	genbank	57_37b	+1	reviewed	nonsense	c.502	p.R168*	0.228	superfamily_Cu_amine_oxidase_N-reg	superfamily_Cu_amine_oxidase_N-reg,HMMPfam_Cu_amine_oxidN2,HMMPfam_Cu_amine_oxidN3,superfamily_CuNH_oxidase,HMMPfam_Cu_amine_oxid,PatternScan_COPPER_AMINE_OXID_1,PatternScan_COPPER_AMINE_OXID_2	-	no_errors	
BAZ1A	11177	genome.wustl.edu	37	14	35240774	35240774	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	35240774	35240774	T	C	SNP	BAZ1A	NM_013448	human	genbank	57_37b	-1	validated	missense	c.3244	p.M1082V	0.000	NULL	HMMPfam_WAC_Acf1_DNA_bd,HMMPfam_DDT,HMMSmart_SM00571,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
BBS7	55212	genome.wustl.edu	37	4	122765151	122765151	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	122765151	122765151	A	G	SNP	BBS7	NM_176824	human	genbank	57_37b	-1	reviewed	silent	c.1236	p.D412	1.000	NULL	NULL	-	no_errors	
BRIP1	83990	genome.wustl.edu	37	17	59763364	59763364	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59763364	59763364	G	A	SNP	BRIP1	NM_032043	human	genbank	57_37b	-1	reviewed	missense	c.2738	p.S913F	0.049	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMSmart_SM00487,HMMPfam_DEAD_2,HMMSmart_SM00491	-	no_errors	
BSN	8927	genome.wustl.edu	37	3	49701899	49701899	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49701899	49701899	C	T	SNP	BSN	NM_003458	human	genbank	57_37b	+1	reviewed	silent	c.11652	p.P3884	0.700	NULL	HMMPfam_zf-piccolo,superfamily_FYVE_PHD_ZnF	-	no_errors	
C14orf174	161394	genome.wustl.edu	37	14	77844210	77844210	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	77844210	77844210	T	G	SNP	C14orf174	NM_001010860	human	genbank	57_37b	+1	provisional	missense	c.449	p.F150C	0.000	NULL	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors	
C1orf83	127428	genome.wustl.edu	37	1	54561996	54561996	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	54561996	54561996	G	A	SNP	C1orf83	NM_153035	human	genbank	57_37b	+1	predicted	silent	c.477	p.T159	1.000	NULL	HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70,HMMSmart_SM00509	-	no_errors	
CACNA1B	774	genome.wustl.edu	37	9	140865989	140865989	+	Silent	SNP	A	A	T	rs2229951	byCluster;byFrequency;by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140865989	140865989	A	T	SNP	CACNA1B	NM_000718	human	genbank	57_37b	+1	validated	silent	c.1488	p.T496	0.003	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-		
CDKL3	51265	genome.wustl.edu	37	5	133644137	133644137	+	Missense_Mutation	SNP	C	C	A	rs114357647	by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	133644137	133644137	C	A	SNP	CDKL3	NM_001113575	human	genbank	57_37b	-1	reviewed	missense	c.1056	p.K352N	0.970	NULL	HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-		
CIT	11113	genome.wustl.edu	37	12	120173024	120173024	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	120173024	120173024	C	A	SNP	CIT	NM_007174	human	genbank	57_37b	-1	validated	missense	c.2971	p.V991L	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C,PatternScan_CPSASE_2,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00036,HMMPfam_CNH	-	no_errors	
CSMD1	64478	genome.wustl.edu	37	8	3266956	3266956	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3266956	3266956	G	T	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	missense	c.1736	p.P579H	1.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
CUL7	9820	genome.wustl.edu	37	6	43016263	43016263	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43016263	43016263	G	T	SNP	CUL7	NM_014780	human	genbank	57_37b	-1	reviewed	missense	c.1870	p.L624M	0.237	NULL	PatternScan_CULLIN_1,superfamily_Gal_bind_like,HMMPfam_APC10,HMMPfam_Cullin,superfamily_Cullin_homology,superfamily_SSF46785	-	no_errors	
DUSP16	80824	genome.wustl.edu	37	12	12630478	12630478	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	12630478	12630478	G	C	SNP	DUSP16	NM_030640	human	genbank	57_37b	-1	validated	nonsense	c.1287	p.Y429*	0.907	NULL	superfamily_Rhodanese-like,HMMPfam_Rhodanese,HMMSmart_RHOD,superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
ENSG00000214311	0	genome.wustl.edu	37	3	129821679	129821679	+	Missense_Mutation	SNP	G	G	A	rs2976117	byCluster;by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	129821679	129821679	G	A	SNP	ENSG00000214311	ENST00000304751	human	ensembl	57_37b	-1	known	missense	c.823	p.R275W	0.107	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_16	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_16	-		
ENSG00000247066	0	genome.wustl.edu	37	4	187509549	187509549	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	187509549	187509549	C	T	SNP	ENSG00000247066	ENST00000500085	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.991	-	-	-	no_errors	
F13A1	2162	genome.wustl.edu	37	6	6197531	6197531	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	6197531	6197531	T	A	SNP	F13A1	NM_000129	human	genbank	57_37b	-1	reviewed	missense	c.1141	p.M381L	1.000	superfamily_SSF54001,HMMSmart_TGc,HMMPfam_Transglut_core	superfamily_Ig_E-set,HMMPfam_Transglut_N,superfamily_SSF54001,HMMSmart_TGc,HMMPfam_Transglut_core,PatternScan_TRANSGLUTAMINASES,superfamily_Transglut_C,HMMPfam_Transglut_C	-	no_errors	
FLG	2312	genome.wustl.edu	37	1	152276823	152276823	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152276823	152276823	C	T	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	silent	c.10539	p.A3513	0.000	HMMPfam_Filaggrin	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors	
FLT3	2322	genome.wustl.edu	37	13	28610163	28610163	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	28610163	28610163	C	T	SNP	FLT3	NM_004119	human	genbank	57_37b	-1	reviewed	missense	c.1327	p.A443T	0.001	NULL	superfamily_SSF48726,HMMPfam_ig,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
FNDC1	84624	genome.wustl.edu	37	6	159646577	159646577	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	159646577	159646577	G	A	SNP	FNDC1	NM_032532	human	genbank	57_37b	+1	validated	missense	c.895	p.V299M	1.000	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors	
GABRA3	2556	genome.wustl.edu	37	X	151376601	151376601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	151376601	151376601	G	A	SNP	GABRA3	NM_000808	human	genbank	57_37b	-1	reviewed	missense	c.650	p.A217V	0.988	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors	
GAD2	2572	genome.wustl.edu	37	10	26534867	26534867	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	26534867	26534867	G	C	SNP	GAD2	NM_000818	human	genbank	57_37b	+1	reviewed	missense	c.858	p.K286N	1.000	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC	-	no_errors	
GNPTAB	79158	genome.wustl.edu	37	12	102159934	102159934	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	102159934	102159934	T	C	SNP	GNPTAB	NM_024312	human	genbank	57_37b	-1	validated	missense	c.1547	p.D516G	1.000	HMMSmart_SM00004,HMMPfam_Notch,superfamily_Notch domain	HMMSmart_SM00004,HMMPfam_Notch,superfamily_Notch domain,HMMPfam_DMAP_binding,PatternScan_EF_HAND_1	-	no_errors	
HYDIN	54768	genome.wustl.edu	37	16	70977777	70977777	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70977777	70977777	C	T	SNP	HYDIN	NM_032821	human	genbank	57_37b	-1	validated	missense	c.6604	p.G2202R	0.974	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
IKZF2	22807	genome.wustl.edu	37	2	213872645	213872645	+	Silent	SNP	C	C	T	rs115182573	by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	213872645	213872645	C	T	SNP	IKZF2	NM_016260	human	genbank	57_37b	-1	reviewed	silent	c.1020	p.P340	0.970	NULL	HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2	-		
IL1RL2	8808	genome.wustl.edu	37	2	102851497	102851497	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	102851497	102851497	G	A	SNP	IL1RL2	NM_003854	human	genbank	57_37b	+1	reviewed	missense	c.1438	p.G480R	0.991	superfamily_TIR,HMMSmart_TIR,HMMPfam_TIR	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig,superfamily_TIR,HMMSmart_TIR,HMMPfam_TIR	-	no_errors	
KIAA0947	23379	genome.wustl.edu	37	5	5437196	5437196	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	5437196	5437196	T	A	SNP	KIAA0947	NM_015325	human	genbank	57_37b	+1	validated	missense	c.147	p.N49K	1.000	NULL	NULL	-	no_errors	
LAMB4	22798	genome.wustl.edu	37	7	107717436	107717436	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	107717436	107717436	G	T	SNP	LAMB4	NM_007356	human	genbank	57_37b	-1	validated	missense	c.2077	p.P693T	0.662	NULL	HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,PatternScan_EGF_2	-	no_errors	
LOC100133994	0	genome.wustl.edu	37	10	5969624	5969624	+	Missense_Mutation	SNP	C	C	A	rs75810819	byCluster;by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5969624	5969624	C	A	SNP	LOC100133994	XM_001716770	human	genbank	57_37b	-1	model	missense	c.493	p.V165F	0.000	NULL	NULL	-		
LOC646214	646214	genome.wustl.edu	37	15	21940114	21940114	+	RNA	SNP	C	C	T	rs2343903	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	21940114	21940114	C	T	SNP	LOC646214	NR_027053	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.980	-	-	-		
LOC646214	646214	genome.wustl.edu	37	15	21940175	21940175	+	RNA	SNP	T	T	G	rs2880723	byCluster;bySubmitter;by2Hit2Allele;byHapMap	TCGA-A8-A076-01	TCGA-A8-A076-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	21940175	21940175	T	G	SNP	LOC646214	NR_027053	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.001	-	-	-		
LOC649264	649264	genome.wustl.edu	37	22	23701895	23701895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	23701895	23701895	G	A	SNP	LOC649264	XM_001131286	human	genbank	57_37b	-1	model	missense	c.793	p.H265Y	0.003	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases	-	no_errors	
LRGUK	136332	genome.wustl.edu	37	7	133884081	133884081	+	Missense_Mutation	SNP	G	G	A	rs34890031	byCluster	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	133884081	133884081	G	A	SNP	LRGUK	NM_144648	human	genbank	57_37b	+1	provisional	missense	c.1655	p.R552H	0.984	superfamily_SSF52540,HMMSmart_GuKc,HMMPfam_Guanylate_kin	PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF52540,HMMSmart_GuKc,HMMPfam_Guanylate_kin	-		
LRP1	4035	genome.wustl.edu	37	12	57573216	57573216	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57573216	57573216	G	A	SNP	LRP1	NM_002332	human	genbank	57_37b	+1	reviewed	missense	c.4843	p.D1615N	1.000	superfamily_YWTD domain,HMMSmart_SM00135	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_1	-	no_errors	
LRSAM1	90678	genome.wustl.edu	37	9	130236137	130236137	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	130236137	130236137	A	G	SNP	LRSAM1	NM_001005373	human	genbank	57_37b	+1	validated	missense	c.677	p.D226G	1.000	superfamily_L domain-like	superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,superfamily_RING/U-box	-	no_errors	
LST-3TM12	338821	genome.wustl.edu	37	12	21196298	21196298	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	21196298	21196298	G	A	SNP	LST-3TM12	NM_001009562	human	genbank	57_37b	+1	validated	missense	c.617	p.R206H	1.000	HMMPfam_OATP,superfamily_MFS general substrate transporter	HMMPfam_OATP,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors,HMMPfam_Kazal_2	-	no_errors	
LTBP1	4052	genome.wustl.edu	37	2	33622241	33622241	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	33622241	33622241	G	C	SNP	LTBP1	NM_206943	human	genbank	57_37b	+1	reviewed	missense	c.4879	p.G1627R	1.000	HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors	
MLL2	8085	genome.wustl.edu	37	12	49427744	49427744	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49427744	49427744	G	A	SNP	MLL2	NM_003482	human	genbank	57_37b	-1	validated	missense	c.10744	p.R3582W	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMSmart_SM00184,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_RECOMBINASES_2,HMMSmart_SM00398,superfamily_HMG-box,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MTO1	25821	genome.wustl.edu	37	6	74191938	74191938	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	74191938	74191938	A	T	SNP	MTO1	NM_001123226	human	genbank	57_37b	+1	reviewed	missense	c.1556	p.D519V	1.000	NULL	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GIDA,PatternScan_GIDA_1	-	no_errors	
MYO18A	399687	genome.wustl.edu	37	17	27493334	27493334	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27493334	27493334	G	A	SNP	MYO18A	NM_078471	human	genbank	57_37b	-1	validated	missense	c.625	p.P209S	0.171	superfamily_PDZ domain-like	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin	-	no_errors	
NDST3	9348	genome.wustl.edu	37	4	118976159	118976159	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	118976159	118976159	G	T	SNP	NDST3	ENST00000394488	human	ensembl	57_37b	+1	known	missense	c.1094	p.S365I	0.000	NULL	NULL	-	no_errors	
NSMAF	8439	genome.wustl.edu	37	8	59502584	59502584	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	59502584	59502584	G	T	SNP	NSMAF	NM_001144772	human	genbank	57_37b	-1	reviewed	missense	c.2162	p.S721Y	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	HMMPfam_GRAM,HMMSmart_SM00568,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
OTOA	146183	genome.wustl.edu	37	16	21712289	21712289	+	Silent	SNP	G	G	A	rs12051473	byCluster;by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	21712289	21712289	G	A	SNP	OTOA	NM_144672	human	genbank	57_37b	+1	reviewed	silent	c.921	p.A307	0.834	NULL	NULL	-		
PCF11	51585	genome.wustl.edu	37	11	82877321	82877321	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	82877321	82877321	C	G	SNP	PCF11	NM_015885	human	genbank	57_37b	+1	validated	missense	c.1382	p.T461R	0.362	NULL	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618	-	no_errors	
PIK3CG	5294	genome.wustl.edu	37	7	106526628	106526628	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	106526628	106526628	G	C	SNP	PIK3CG	NM_002649	human	genbank	57_37b	+1	reviewed	missense	c.2921	p.S974T	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146	superfamily_Ubiquitin-like,HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PI3K_C2,superfamily_ARM repeat,HMMSmart_SM00145,HMMPfam_PI3Ka,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PKD1L1	168507	genome.wustl.edu	37	7	47852858	47852858	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	47852858	47852858	A	T	SNP	PKD1L1	NM_138295	human	genbank	57_37b	-1	reviewed	missense	c.7207	p.S2403T	0.000	HMMPfam_PKD_channel	HMMSmart_SM00089,superfamily_PKD domain,HMMPfam_PKD,HMMPfam_REJ,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_PKD_channel	-	no_errors	
RIMS1	22999	genome.wustl.edu	37	6	73110213	73110213	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	73110213	73110213	G	A	SNP	RIMS1	NM_014989	human	genbank	57_37b	+1	reviewed	missense	c.4876	p.D1626N	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_FYVE/PHD zinc finger,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,PatternScan_GLYCOSYL_HYDROL_F1_1	-	no_errors	
RIMS2	9699	genome.wustl.edu	37	8	104955015	104955015	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	104955015	104955015	A	C	SNP	RIMS2	NM_001100117	human	genbank	57_37b	+1	validated	missense	c.2562	p.L854F	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239	HMMPfam_RPH3A_effector,superfamily_FYVE/PHD zinc finger,superfamily_PDZ domain-like,HMMSmart_SM00228,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
RPL19	6143	genome.wustl.edu	37	17	37358625	37358625	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	37358625	37358625	G	A	SNP	RPL19	NM_000981	human	genbank	57_37b	+1	reviewed	silent	c.168	p.T56	0.846	superfamily_Ribosomal protein L19 (L19e),HMMPfam_Ribosomal_L19e	superfamily_Ribosomal protein L19 (L19e),HMMPfam_Ribosomal_L19e,PatternScan_RIBOSOMAL_L19E	-	no_errors	
SFTPD	6441	genome.wustl.edu	37	10	81701721	81701721	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	81701721	81701721	G	C	SNP	SFTPD	NM_003019	human	genbank	57_37b	-1	validated	missense	c.539	p.T180R	0.030	HMMPfam_Collagen	HMMPfam_Collagen,HMMPfam_Surfac_D-trimer,HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors	
SRGAP1	57522	genome.wustl.edu	37	12	64519802	64519802	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	64519802	64519802	G	A	SNP	SRGAP1	NM_020762	human	genbank	57_37b	+1	validated	missense	c.2270	p.R757Q	1.000	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	HMMPfam_FCH,HMMSmart_SM00055,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
TGM1	7051	genome.wustl.edu	37	14	24718579	24718579	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24718579	24718579	G	A	SNP	TGM1	NM_000359	human	genbank	57_37b	-1	reviewed	silent	c.2394	p.D798	0.000	NULL	superfamily_Ig_E-set,HMMPfam_Transglut_N,superfamily_SSF54001,HMMSmart_TGc,PatternScan_TRANSGLUTAMINASES,HMMPfam_Transglut_core,superfamily_Transglut_C,HMMPfam_Transglut_C	-	no_errors	
THSD7A	221981	genome.wustl.edu	37	7	11521471	11521471	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	11521471	11521471	G	A	SNP	THSD7A	NM_015204	human	genbank	57_37b	-1	validated	missense	c.1961	p.T654M	1.000	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors	
TIRAP	114609	genome.wustl.edu	37	11	126160826	126160826	+	Missense_Mutation	SNP	C	C	T	rs8177399	byCluster;byFrequency;by1000genomes	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	126160826	126160826	C	T	SNP	TIRAP	NM_148910	human	genbank	57_37b	+1	reviewed	missense	c.37	p.R13W	0.001	NULL	superfamily_Toll/Interleukin receptor TIR domain	-		
TMPRSS13	84000	genome.wustl.edu	37	11	117774452	117774452	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	117774452	117774452	C	G	SNP	TMPRSS13	NM_001077263	human	genbank	57_37b	-1	validated	missense	c.1595	p.G532A	1.000	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_SRCR-like,HMMSmart_SM00202,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
TNFRSF10A	8797	genome.wustl.edu	37	8	23069723	23069723	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	23069723	23069723	G	A	SNP	TNFRSF10A	NM_003844	human	genbank	57_37b	-1	reviewed	silent	c.309	p.V103	0.000	NULL	superfamily_TNF receptor-like,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,HMMSmart_SM00005,superfamily_DEATH domain,HMMPfam_Death	-	no_errors	
TRAK2	66008	genome.wustl.edu	37	2	202260102	202260102	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	202260102	202260102	G	A	SNP	TRAK2	NM_015049	human	genbank	57_37b	-1	validated	nonsense	c.835	p.R279*	1.000	HMMPfam_HAP1_N	HMMPfam_HAP1_N	-	no_errors	
TRIB2	28951	genome.wustl.edu	37	2	12863563	12863563	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	12863563	12863563	G	A	SNP	TRIB2	NM_021643	human	genbank	57_37b	+1	reviewed	missense	c.448	p.E150K	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	-	no_errors	
WDR20	91833	genome.wustl.edu	37	14	102675570	102675570	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	102675570	102675570	C	A	SNP	WDR20	NM_181291	human	genbank	57_37b	+1	reviewed	silent	c.1063	p.R355	1.000	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
XAGE-4	139629	genome.wustl.edu	37	X	55682832	55682832	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	55682832	55682832	C	T	SNP	XAGE-4	XR_040958	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.106	-	-	-	no_errors	
XPNPEP3	63929	genome.wustl.edu	37	22	41320367	41320367	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	41320367	41320367	C	A	SNP	XPNPEP3	NM_022098	human	genbank	57_37b	+1	validated	missense	c.1238	p.A413D	1.000	superfamily_Creatinase/aminopeptidase,HMMPfam_Peptidase_M24	superfamily_Creatinase/prolidase N-terminal domain,HMMPfam_AMP_N,superfamily_Creatinase/aminopeptidase,HMMPfam_Peptidase_M24	-	no_errors	
ZNF266	10781	genome.wustl.edu	37	19	9525219	9525219	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9525219	9525219	G	A	SNP	ZNF266	NM_006631	human	genbank	57_37b	-1	validated	missense	c.382	p.R128C	0.000	superfamily_SSF57667	HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF716	441234	genome.wustl.edu	37	7	57528714	57528714	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A076-01	TCGA-A8-A076-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	57528714	57528714	A	T	SNP	ZNF716	XM_002342727	human	genbank	57_37b	+1	model	nonsense	c.547	p.K183*	1.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
