Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ACAD11	84129	genome.wustl.edu	37	3	132378462	132378462	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	132378462	132378462	G	T	SNP	ACAD11	NM_032169	human	genbank	57_37b	-1	validated	missense	c.134	p.T45N	0.001	superfamily_Protein kinase-like (PK-like),HMMPfam_APH	superfamily_Protein kinase-like (PK-like),HMMPfam_APH,PatternScan_PROTEIN_KINASE_TYR,superfamily_Acyl-CoA dehydrogenase NM domain-like,HMMPfam_Acyl-CoA_dh_N,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like	-	no_errors	
ANKRD13C	81573	genome.wustl.edu	37	1	70758132	70758132	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70758132	70758132	C	T	SNP	ANKRD13C	NM_030816	human	genbank	57_37b	-1	validated	missense	c.1154	p.R385Q	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
AQP10	89872	genome.wustl.edu	37	1	154293636	154293636	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154293636	154293636	T	C	SNP	AQP10	NM_080429	human	genbank	57_37b	+1	reviewed	missense	c.5	p.V2A	0.000	NULL	HMMPfam_MIP,superfamily_Aquaporin-like,PatternScan_MIP	-	no_errors	
ATM	472	genome.wustl.edu	37	11	108129723	108129723	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	108129723	108129723	A	C	SNP	ATM	NM_000051	human	genbank	57_37b	+1	reviewed	missense	c.2387	p.N796T	0.351	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_FAT,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	-	no_errors	
ATXN1	6310	genome.wustl.edu	37	6	16328465	16328465	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	16328465	16328465	G	C	SNP	ATXN1	NM_000332	human	genbank	57_37b	-1	reviewed	missense	c.77	p.S26C	0.892	NULL	superfamily_AXH domain,HMMSmart_SM00536,HMMPfam_AXH	-	no_errors	
ATXN2L	11273	genome.wustl.edu	37	16	28842080	28842080	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28842080	28842080	C	T	SNP	ATXN2L	NM_148414	human	genbank	57_37b	+1	reviewed	silent	c.1179	p.G393	1.000	NULL	HMMPfam_LsmAD,HMMPfam_PAM2	-	no_errors	
BAT5	7920	genome.wustl.edu	37	6	31655488	31655488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31655488	31655488	C	T	SNP	BAT5	NM_021160	human	genbank	57_37b	-1	reviewed	missense	c.1477	p.E493K	1.000	superfamily_SSF53474	superfamily_SSF53474,HMMPfam_Abhydrolase_1	-	no_errors	
C1orf85	112770	genome.wustl.edu	37	1	156263157	156263157	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156263157	156263157	C	T	SNP	C1orf85	NM_144580	human	genbank	57_37b	-1	provisional	missense	c.1009	p.G337R	0.999	NULL	NULL	-	no_errors	
CASC5	57082	genome.wustl.edu	37	15	40921499	40921499	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40921499	40921499	G	C	SNP	CASC5	NM_170589	human	genbank	57_37b	+1	validated	missense	c.5690	p.R1897T	0.524	NULL	NULL	-	no_errors	
CASR	846	genome.wustl.edu	37	3	121980842	121980842	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	121980842	121980842	C	T	SNP	CASR	NM_000388	human	genbank	57_37b	+1	reviewed	silent	c.960	p.F320	0.980	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors	
CHD4	1108	genome.wustl.edu	37	12	6702335	6702335	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6702335	6702335	G	A	SNP	CHD4	NM_001273	human	genbank	57_37b	-1	reviewed	silent	c.2574	p.D858	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N	HMMPfam_CHDNT,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00298,superfamily_Chromo domain-like,PatternScan_CHROMO_1,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_DUF1087,HMMPfam_DUF1086,HMMPfam_CHDCT2	-	no_errors	
CNTNAP2	26047	genome.wustl.edu	37	7	147914474	147914474	+	Silent	SNP	C	C	T	rs112483670	by1000genomes	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	147914474	147914474	C	T	SNP	CNTNAP2	NM_014141	human	genbank	57_37b	+1	reviewed	silent	c.3105	p.N1035	0.000	superfamily_Concanavalin A-like lectins/glucanases	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00181,HMMPfam_EGF,superfamily_Fibrinogen C-terminal domain-like,PatternScan_GLYCO_HORMONE_BETA_1,HMMSmart_SM00294	-		
CYP11B2	1585	genome.wustl.edu	37	8	143994076	143994076	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	143994076	143994076	T	A	SNP	CYP11B2	NM_000498	human	genbank	57_37b	-1	reviewed	missense	c.1268	p.Y423F	0.852	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors	
DLGAP4	22839	genome.wustl.edu	37	20	35060254	35060254	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	35060254	35060254	G	A	SNP	DLGAP4	NM_014902	human	genbank	57_37b	+1	reviewed	missense	c.134	p.R45H	1.000	NULL	HMMPfam_GKAP	-	no_errors	
DNAH11	8701	genome.wustl.edu	37	7	21805205	21805205	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	21805205	21805205	G	A	SNP	DNAH11	NM_003777	human	genbank	57_37b	+1	reviewed	missense	c.9121	p.E3041K	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	-	no_errors	
ENSG00000099389	0	genome.wustl.edu	37	20	26094525	26094525	+	Missense_Mutation	SNP	T	T	C	rs62211580	byCluster	TCGA-A8-A07O-01	TCGA-A8-A07O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	26094525	26094525	T	C	SNP	ENSG00000099389	ENST00000356439	human	ensembl	57_37b	-1	known	missense	c.98	p.H33R	0.988	NULL	NULL	-		
FGFR4	2264	genome.wustl.edu	37	5	176522628	176522628	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176522628	176522628	C	T	SNP	FGFR4	NM_002011	human	genbank	57_37b	+1	reviewed	silent	c.1725	p.D575	0.011	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
HSPBAP1	79663	genome.wustl.edu	37	3	122459670	122459670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	122459670	122459670	G	A	SNP	HSPBAP1	NM_024610	human	genbank	57_37b	-1	provisional	missense	c.989	p.S330F	0.807	NULL	superfamily_Clavaminate synthase-like,HMMSmart_SM00558,HMMPfam_JmjC	-	no_errors	
LAMA1	284217	genome.wustl.edu	37	18	7015822	7015822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	7015822	7015822	G	A	SNP	LAMA1	NM_005559	human	genbank	57_37b	-1	validated	missense	c.3025	p.P1009S	0.751	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00181,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_2,HMMSmart_SM00281,HMMPfam_Laminin_B,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMSmart_SM00282,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors	
LAMA4	3910	genome.wustl.edu	37	6	112512915	112512915	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	112512915	112512915	C	T	SNP	LAMA4	NM_001105206	human	genbank	57_37b	-1	reviewed	missense	c.641	p.R214H	0.957	HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_LAM_1	HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_LAM_1,PatternScan_EGF_1,HMMPfam_Laminin_I,HMMPfam_Laminin_II,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
LOC55908	55908	genome.wustl.edu	37	19	11350320	11350330	+	Frame_Shift_Del	DEL	GTGCCTGCTCT	GTGCCTGCTCT	-	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	GTGCCTGCTCT	GTGCCTGCTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11350320	11350330	GTGCCTGCTCT	-	DEL	LOC55908	NM_018687	human	genbank	57_37b	+1	validated	frame_shift_del	c.166_176	p.L59fs	0.000:0.000:0.001:0.001:0.000:0.000:0.000:0.000:0.004:0.949:0.993	NULL	NULL	(deletion:cds_exon[11350294,11350610])	no_errors	
LOC644231	644231	genome.wustl.edu	37	15	32820755	32820755	+	Missense_Mutation	SNP	T	C	C	rs2338293	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	32820755	32820755	T	C	SNP	LOC644231	XM_001726978	human	genbank	57_37b	-1	model	missense	c.146	p.K49R	1.000	NULL	NULL	-		
LRP6	4040	genome.wustl.edu	37	12	12311946	12311946	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	12311946	12311946	G	T	SNP	LRP6	NM_002336	human	genbank	57_37b	-1	reviewed	missense	c.2608	p.Q870K	1.000	superfamily_YWTD domain,HMMPfam_Ldl_recept_b	superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_2,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors	
MARCH7	64844	genome.wustl.edu	37	2	160605150	160605150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	160605150	160605150	C	T	SNP	MARCH7	NM_022826	human	genbank	57_37b	+1	validated	missense	c.1349	p.A450V	1.000	NULL	superfamily_SSF57850,HMMSmart_RINGv,HMMPfam_zf-C3HC4	-	no_errors	
MLYCD	23417	genome.wustl.edu	37	16	83948559	83948560	+	Splice_Site	DEL	AG	AG	-	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	83948559	83948560	AG	-	DEL	MLYCD	NM_012213	human	genbank	57_37b	+1	reviewed	splice_site_del	c.949-2_949-1	e5-1	1.000:1.000	-	-	(deletion:intron[83945973,83948560])	no_errors	
MTMR11	10903	genome.wustl.edu	37	1	149908094	149908094	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	149908094	149908094	G	A	SNP	MTMR11	ENST00000439741	human	ensembl	57_37b	-1	known	missense	c.95	p.P32L	0.988	NULL	superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	9065839	9065839	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9065839	9065839	A	C	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.21607	p.S7203A	0.007	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MUC5B	727897	genome.wustl.edu	37	11	1264973	1264973	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1264973	1264973	C	T	SNP	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	missense	c.6872	p.P2291L	0.000	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	-	no_errors	
NBEA	26960	genome.wustl.edu	37	13	35733461	35733463	+	In_Frame_Del	DEL	AGT	AGT	-	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	AGT	AGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	35733461	35733463	AGT	-	DEL	NBEA	NM_015678	human	genbank	57_37b	+1	reviewed	in_frame_del	c.3153_3155	p.V1052in_frame_del	1.000:1.000:1.000	superfamily_ARM repeat	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF1088,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	(deletion:cds_exon[35733153,35734169])	no_errors	
NUDT6	11162	genome.wustl.edu	37	4	123814333	123814333	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	123814333	123814333	C	T	SNP	NUDT6	NM_007083	human	genbank	57_37b	-1	validated	missense	c.601	p.E201K	1.000	superfamily_Nudix,HMMPfam_NUDIX	superfamily_Nudix,HMMPfam_NUDIX,PatternScan_NUDIX	-	no_errors	
OR2W5	441932	genome.wustl.edu	37	1	247654793	247654793	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	247654793	247654793	C	T	SNP	OR2W5	NM_001004698	human	genbank	57_37b	+1	validated	missense	c.364	p.R122C	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors	
OR51M1	390059	genome.wustl.edu	37	11	5411028	5411028	+	Missense_Mutation	SNP	C	C	T	rs74683499	byCluster;byFrequency;by1000genomes	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5411028	5411028	C	T	SNP	OR51M1	NM_001004756	human	genbank	57_37b	+1	validated	missense	c.400	p.R134C	0.982	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-		
PARP6	56965	genome.wustl.edu	37	15	72559136	72559136	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	72559136	72559136	C	T	SNP	PARP6	NM_020214	human	genbank	57_37b	-1	provisional	missense	c.31	p.D11N	1.000	NULL	superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors	
PCMTD2	55251	genome.wustl.edu	37	20	62891426	62891426	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62891426	62891426	C	T	SNP	PCMTD2	NM_018257	human	genbank	57_37b	+1	validated	silent	c.108	p.I36	0.609	HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors	
PCSK5	5125	genome.wustl.edu	37	9	78772039	78772039	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	78772039	78772039	G	A	SNP	PCSK5	NM_006200	human	genbank	57_37b	+1	reviewed	missense	c.1391	p.R464Q	1.000	superfamily_Galactose-binding domain-like	superfamily_Protease propeptides/inhibitors,superfamily_Subtilisin-like,HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Galactose-binding domain-like,HMMPfam_P_proprotein,HMMSmart_SM00261,superfamily_Growth factor receptor domain,HMMPfam_PLAC	-	no_errors	
PLEKHM2	23207	genome.wustl.edu	37	1	16042766	16042766	+	Missense_Mutation	SNP	T	T	C	rs12091750	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A07O-01	TCGA-A8-A07O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16042766	16042766	T	C	SNP	PLEKHM2	NM_015164	human	genbank	57_37b	+1	validated	missense	c.95	p.I32T	1.000	NULL	HMMPfam_RUN,HMMSmart_RUN,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	-		
PPM1L	151742	genome.wustl.edu	37	3	160474474	160474474	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	160474474	160474474	C	G	SNP	PPM1L	NM_139245	human	genbank	57_37b	+1	provisional	missense	c.378	p.I126M	1.000	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C,HMMSmart_SM00331,PatternScan_PP2C	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C,HMMSmart_SM00331,PatternScan_PP2C	-	no_errors	
PREX2	80243	genome.wustl.edu	37	8	68965476	68965476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	68965476	68965476	G	A	SNP	PREX2	NM_024870	human	genbank	57_37b	+1	validated	missense	c.1088	p.R363Q	1.000	superfamily_PH domain-like,HMMSmart_SM00233	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_PDZ domain-like,HMMSmart_SM00228"	-	no_errors	
SALL4	57167	genome.wustl.edu	37	20	50400810	50400810	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	50400810	50400810	G	A	SNP	SALL4	NM_020436	human	genbank	57_37b	-1	reviewed	silent	c.3156	p.V1052	1.000	NULL	HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors	
SCN3B	55800	genome.wustl.edu	37	11	123513189	123513189	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	123513189	123513189	G	A	SNP	SCN3B	NM_001040151	human	genbank	57_37b	-1	reviewed	missense	c.410	p.T137M	1.000	HMMPfam_V-set,HMMSmart_SM00409	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409	-	no_errors	
SCO2	9997	genome.wustl.edu	37	22	50962301	50962301	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	50962301	50962301	G	A	SNP	SCO2	NM_005138	human	genbank	57_37b	-1	reviewed	silent	c.540	p.Y180	0.986	HMMPfam_SCO1-SenC,superfamily_Thiordxn-like_fd	HMMPfam_SCO1-SenC,superfamily_Thiordxn-like_fd	-	no_errors	
SH2D4A	63898	genome.wustl.edu	37	8	19231145	19231145	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	19231145	19231145	C	T	SNP	SH2D4A	NM_022071	human	genbank	57_37b	+1	provisional	missense	c.1022	p.S341L	0.591	superfamily_SSF55550	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors	
SIRPG	55423	genome.wustl.edu	37	20	1610894	1610894	+	Silent	SNP	G	A	A	rs3746721	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1610894	1610894	G	A	SNP	SIRPG	NM_018556	human	genbank	57_37b	-1	reviewed	silent	c.1140	p.Y380	0.000	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C1-set,HMMSmart_SM00407	-		
SLC24A6	80024	genome.wustl.edu	37	12	113753246	113753246	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113753246	113753246	G	A	SNP	SLC24A6	NM_024959	human	genbank	57_37b	-1	validated	silent	c.1029	p.P343	0.380	NULL	HMMPfam_Na_Ca_ex	-	no_errors	
SP1	6667	genome.wustl.edu	37	12	53776064	53776064	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53776064	53776064	T	C	SNP	SP1	NM_138473	human	genbank	57_37b	+1	validated	silent	c.333	p.S111	0.909	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors	
SPHK2	56848	genome.wustl.edu	37	19	49131440	49131440	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49131440	49131440	C	T	SNP	SPHK2	NM_020126	human	genbank	57_37b	+1	provisional	missense	c.778	p.R260C	0.977	HMMPfam_DAGK_cat,HMMSmart_SM00046	HMMPfam_DAGK_cat,HMMSmart_SM00046	-	no_errors	
ST18	9705	genome.wustl.edu	37	8	53079446	53079446	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	53079446	53079446	C	T	SNP	ST18	NM_014682	human	genbank	57_37b	-1	validated	silent	c.1170	p.S390	0.179	superfamily_SSF103637,HMMPfam_zf-C2HC	superfamily_SSF103637,HMMPfam_zf-C2HC,HMMPfam_MYT1	-	no_errors	
TCHP	84260	genome.wustl.edu	37	12	110346447	110346447	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	110346447	110346447	G	A	SNP	TCHP	NM_001143852	human	genbank	57_37b	+1	validated	silent	c.756	p.E252	0.320	NULL	NULL	-	no_errors	
TMEM131	23505	genome.wustl.edu	37	2	98475800	98475802	+	In_Frame_Del	DEL	TGT	TGT	-	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	TGT	TGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	98475800	98475802	TGT	-	DEL	TMEM131	NM_015348	human	genbank	57_37b	-1	validated	in_frame_del	c.450_448	p.T150in_frame_del	1.000:1.000:1.000	NULL	NULL	(deletion:cds_exon[98475767,98475890])	no_errors	
TP53	7157	genome.wustl.edu	37	17	7579311	7579311	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7579311	7579311	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	splice_site	c.375+1	e3+1	1.000	-	-	-	no_errors	
UQCRC1	7384	genome.wustl.edu	37	3	48641015	48641015	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07O-01	TCGA-A8-A07O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48641015	48641015	C	G	SNP	UQCRC1	NM_003365	human	genbank	57_37b	-1	validated	missense	c.688	p.V230L	1.000	superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16_C	superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16,HMMPfam_Peptidase_M16_C	-	no_errors	
