Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AGAP7	0	genome.wustl.edu	37	10	51485576	51485576	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	51485576	51485576	C	-	DEL	AGAP7	ENST00000416142	human	ensembl	57_37b	-1	known	frame_shift_del	c.256	p.A86fs	0.351	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	(deletion:cds_exon[51485542,51485576])	no_errors	
ALDH8A1	64577	genome.wustl.edu	37	6	135239594	135239594	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	135239594	135239594	C	T	SNP	ALDH8A1	NM_022568	human	genbank	57_37b	-1	reviewed	missense	c.1423	p.D475N	1.000	superfamily_ALDH-like,HMMPfam_Aldedh	superfamily_ALDH-like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors	
BSG	682	genome.wustl.edu	37	19	580665	580665	+	Silent	SNP	T	T	C	rs4682	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	580665	580665	T	C	SNP	BSG	NM_001728	human	genbank	57_37b	+1	reviewed	silent	c.675	p.A225	0.000	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-		
C8orf33	65265	genome.wustl.edu	37	8	146278127	146278127	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	146278127	146278127	C	T	SNP	C8orf33	NM_023080	human	genbank	57_37b	+1	validated	silent	c.162	p.D54	0.004	NULL	NULL	-	no_errors	
CACNA1A	773	genome.wustl.edu	37	19	13409390	13409390	+	Silent	SNP	C	C	T	rs16025	byCluster;byFrequency;by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	13409390	13409390	C	T	SNP	CACNA1A	NM_001127222	human	genbank	57_37b	-1	reviewed	silent	c.3057	p.R1019	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-		
CCDC159	126075	genome.wustl.edu	37	19	11465265	11465267	+	In_Frame_Del	DEL	GGC	GGC	-	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	GGC	GGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11465265	11465267	GGC	-	DEL	CCDC159	NM_001080503	human	genbank	57_37b	+1	validated	in_frame_del	c.782_784	p.GH261in_frame_delD	0.057:0.020:0.061	NULL	NULL	(deletion:cds_exon[11465256,11465372])	no_errors	
CDH1	999	genome.wustl.edu	37	16	68847278	68847279	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	68847278	68847279	-	A	INS	CDH1	NM_004360	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.1200_1201	p.A400fs	0.868:0.825	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CHD3	1107	genome.wustl.edu	37	17	7796758	7796758	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7796758	7796758	G	C	SNP	CHD3	NM_001005271	human	genbank	57_37b	+1	reviewed	missense	c.841	p.E281Q	1.000	NULL	HMMPfam_CHDNT,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00298,superfamily_Chromo domain-like,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_CHROMO_1,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_DUF1087,HMMPfam_DUF1086,HMMPfam_CHDCT2	-	no_errors	
CLSPN	63967	genome.wustl.edu	37	1	36202522	36202522	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	36202522	36202522	T	-	DEL	CLSPN	NM_022111	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.3902	p.K1301fs	1.000	NULL	NULL	(deletion:cds_exon[36202515,36202676])	no_errors	
ENSG00000214676	0	genome.wustl.edu	37	4	169677486	169677486	+	Splice_Site	SNP	G	G	A	rs7439293	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	169677486	169677486	G	A	SNP	ENSG00000214676	ENST00000398768	human	ensembl	57_37b	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-		
ENSG00000245441	0	genome.wustl.edu	37	6	159187884	159187884	+	RNA	DEL	G	G	-	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	159187884	159187884	G	-	DEL	ENSG00000245441	ENST00000501546	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	(deletion:rna[159186817,159188067])	no_errors	
ENSG00000247397	0	genome.wustl.edu	37	8	12396467	12396467	+	RNA	SNP	A	G	G	rs2681161	byCluster	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	12396467	12396467	A	G	SNP	ENSG00000247397	ENST00000500162	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.014	-	-	-		
ERBB2	2064	genome.wustl.edu	37	17	37880220	37880220	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	37880220	37880220	T	C	SNP	ERBB2	NM_004448	human	genbank	57_37b	+1	reviewed	missense	c.2264	p.L755S	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_L domain-like,HMMPfam_Recep_L_domain,superfamily_Growth factor receptor domain,HMMPfam_Furin-like,HMMSmart_SM00261,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_EF_HAND_1,HMMPfam_YLP	-	no_errors	
FAM47A	158724	genome.wustl.edu	37	X	34149384	34149384	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	34149384	34149384	G	A	SNP	FAM47A	NM_203408	human	genbank	57_37b	-1	predicted	missense	c.1012	p.R338C	0.452	NULL	NULL	-	no_errors	
FLG	2312	genome.wustl.edu	37	1	152282683	152282683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152282683	152282683	C	T	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	missense	c.4679	p.R1560H	0.000	HMMPfam_Filaggrin	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors	
HERC2	8924	genome.wustl.edu	37	15	28421867	28421867	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	28421867	28421867	A	G	SNP	HERC2	NM_004667	human	genbank	57_37b	-1	reviewed	silent	c.9480	p.S3160	0.333	superfamily_RCC1/BLIP-II,HMMPfam_RCC1	superfamily_RCC1/BLIP-II,HMMPfam_RCC1,HMMSmart_SM00706,superfamily_Cytochrome b5-like heme/steroid binding domain,HMMPfam_Cyt-b5,HMMPfam_MIB_HERC2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,superfamily_Galactose-binding domain-like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RCC1_2,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
HLA-DRB6	3128	genome.wustl.edu	37	6	32522713	32522713	+	RNA	SNP	G	G	C	rs75645737	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32522713	32522713	G	C	SNP	HLA-DRB6	NR_001298	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.675	-	-	-		
HLA-DRB6	3128	genome.wustl.edu	37	6	32522731	32522731	+	RNA	SNP	C	C	T	rs80248770	by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32522731	32522731	C	T	SNP	HLA-DRB6	NR_001298	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.993	-	-	-		
HLA-DRB6	3128	genome.wustl.edu	37	6	32522736	32522736	+	RNA	SNP	A	A	C	rs74319231	by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32522736	32522736	A	C	SNP	HLA-DRB6	NR_001298	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.994	-	-	-		
INPP5B	3633	genome.wustl.edu	37	1	38409488	38409488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	38409488	38409488	C	T	SNP	INPP5B	NM_005540	human	genbank	57_37b	-1	reviewed	missense	c.230	p.R77Q	0.648	NULL	PatternScan_LECTIN_LEGUME_BETA,superfamily_DNase I-like,HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
IPO13	9670	genome.wustl.edu	37	1	44424472	44424472	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	44424472	44424472	C	G	SNP	IPO13	NM_014652	human	genbank	57_37b	+1	reviewed	missense	c.1939	p.L647V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_IBN_N,HMMPfam_Xpo1	-	no_errors	
KIAA1462	57608	genome.wustl.edu	37	10	30318244	30318244	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	30318244	30318244	C	G	SNP	KIAA1462	NM_020848	human	genbank	57_37b	-1	validated	missense	c.833	p.S278T	0.884	NULL	NULL	-	no_errors	
LOC100289574	0	genome.wustl.edu	37	16	32190861	32190861	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	32190861	32190861	G	T	SNP	LOC100289574	XM_002343438	human	genbank	57_37b	-1	model	missense	c.321	p.S107R	1.000	NULL	NULL	-	no_errors	
LOC388996	388996	genome.wustl.edu	37	2	91777596	91777596	+	RNA	SNP	G	G	A	rs6736131	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	91777596	91777596	G	A	SNP	LOC388996	XR_017571	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.001	-	-	-		
MAST1	22983	genome.wustl.edu	37	19	12984565	12984565	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12984565	12984565	G	A	SNP	MAST1	NM_014975	human	genbank	57_37b	+1	validated	silent	c.3594	p.S1198	0.997	NULL	PatternScan_PROTEIN_KINASE_ATP,HMMPfam_DUF1908,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ	-	no_errors	
MYH10	4628	genome.wustl.edu	37	17	8439105	8439105	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8439105	8439105	C	A	SNP	MYH10	NM_005964	human	genbank	57_37b	-1	validated	missense	c.1720	p.D574Y	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	superfamily_Myosin S1 fragment N-terminal domain,HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
MYO1D	4642	genome.wustl.edu	37	17	30821847	30821847	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	30821847	30821847	C	T	SNP	MYO1D	NM_015194	human	genbank	57_37b	-1	provisional	missense	c.2951	p.R984Q	0.980	HMMPfam_Myosin_TH1	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_Myosin_TH1	-	no_errors	
PCDHA10	56139	genome.wustl.edu	37	5	140236812	140236812	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140236812	140236812	G	A	SNP	PCDHA10	NM_018901	human	genbank	57_37b	+1	reviewed	silent	c.1179	p.P393	0.878	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
RUNX1	861	genome.wustl.edu	37	21	36252946	36252946	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	36252946	36252946	T	C	SNP	RUNX1	NM_001754	human	genbank	57_37b	-1	reviewed	missense	c.416	p.N139S	1.000	HMMPfam_Runt,superfamily_p53-like transcription factors	HMMPfam_Runt,superfamily_p53-like transcription factors,HMMPfam_RunxI	-	no_errors	
SLC6A16	28968	genome.wustl.edu	37	19	49814294	49814294	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49814294	49814294	G	A	SNP	SLC6A16	NM_014037	human	genbank	57_37b	-1	validated	missense	c.311	p.P104L	0.483	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors	
SMARCC1	6599	genome.wustl.edu	37	3	47676719	47676719	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47676719	47676719	G	C	SNP	SMARCC1	NM_003074	human	genbank	57_37b	-1	validated	silent	c.2607	p.A869	0.884	NULL	superfamily_BRCT,HMMSmart_CHROMO,HMMPfam_SWIRM,superfamily_Homeodomain_like,HMMSmart_SANT,HMMPfam_Myb_DNA-binding	-	no_errors	
SNRPN	6638	genome.wustl.edu	37	15	25221514	25221514	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	25221514	25221514	G	T	SNP	SNRPN	NM_003097	human	genbank	57_37b	+1	reviewed	missense	c.218	p.R73L	0.945	superfamily_Sm-like ribonucleoproteins,HMMPfam_LSM,HMMSmart_SM00651	superfamily_Sm-like ribonucleoproteins,HMMPfam_LSM,HMMSmart_SM00651	-	no_errors	
SRP14	6727	genome.wustl.edu	37	15	40330494	40330496	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40330494	40330496	TCT	-	DEL	SRP14	NM_003134	human	genbank	57_37b	-1	validated	in_frame_del	c.199_197	p.K66in_frame_del	1.000:1.000:1.000	superfamily_SRP9/14,HMMPfam_SRP14	superfamily_SRP9/14,HMMPfam_SRP14	(deletion:cds_exon[40330483,40330595])	no_errors	
TRGV7	0	genome.wustl.edu	37	7	38374697	38374697	+	Silent	SNP	G	G	A	rs2240853	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	38374697	38374697	G	A	SNP	TRGV7	ENST00000414244	human	ensembl	57_37b	-1	known	silent	c.298	p.L100	0.000	HMMPfam_V-set,superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin	-		
TRIP6	7205	genome.wustl.edu	37	7	100468023	100468023	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100468023	100468023	T	-	DEL	TRIP6	NM_003302	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.767	p.L256fs	1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	(deletion:cds_exon[100467992,100468085])	no_errors	
ZNF840	0	genome.wustl.edu	37	20	45093582	45093582	+	Missense_Mutation	SNP	T	T	C	rs975102	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A0AB-01	TCGA-A8-A0AB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	45093582	45093582	T	C	SNP	ZNF840	XM_001722110	human	genbank	57_37b	+1	model	missense	c.476	p.V159A	0.064	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-		
