Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABLIM1	3983	genome.wustl.edu	37	10	116335275	116335275	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	116335275	116335275	C	T	SNP	ABLIM1	NM_002313	human	genbank	57_37b	-1	reviewed	missense	c.463	p.G155R	1.000	superfamily_Glucocorticoid receptor-like (DNA-binding domain)	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_VHP Villin headpiece domain,HMMPfam_VHP,HMMSmart_SM00153	-	no_errors	
ACADSB	37	genome.wustl.edu	36	10	124768562	124768562	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	124768562	124768562	T	C	SNP	ACADSB	NM_001609	human	genbank	57_37b	+1	reviewed	missense	c.17	p.V6A	0.000	NULL	superfamily_Acyl-CoA dehydrogenase NM domain-like,HMMPfam_Acyl-CoA_dh_N,HMMPfam_Acyl-CoA_dh_M,PatternScan_ACYL_COA_DH_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like,HMMPfam_Acyl-CoA_dh_1,PatternScan_ACYL_COA_DH_2	-	no_errors	
ADAMTSL3	57188	genome.wustl.edu	37	15	84539708	84539708	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	84539708	84539708	C	G	SNP	ADAMTSL3	NM_207517	human	genbank	57_37b	+1	validated	missense	c.957	p.F319L	1.000	NULL	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_PLAC	-	no_errors	
ADCY6	112	genome.wustl.edu	37	12	49164616	49164616	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49164616	49164616	G	C	SNP	ADCY6	NM_015270	human	genbank	57_37b	-1	reviewed	silent	c.3189	p.A1063	1.000	HMMSmart_SM00044,HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1,HMMPfam_DUF1053	-	no_errors	
APLP2	334	genome.wustl.edu	37	11	130003552	130003552	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	130003552	130003552	A	-	DEL	APLP2	NM_001642	human	genbank	57_37b	+1	validated	frame_shift_del	c.1613	p.R539fs	1.000	superfamily_CAPPD an extracellular domain of amyloid beta A4 protein	HMMPfam_A4_EXTRA,HMMSmart_SM00006,superfamily_A heparin-binding domain,superfamily_Amyloid beta a4 protein copper binding domain (domain 2),PatternScan_A4_EXTRA,superfamily_BPTI-like,HMMSmart_SM00131,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1,superfamily_CAPPD an extracellular domain of amyloid beta A4 protein,HMMPfam_APP_amyloid,PatternScan_A4_INTRA	(deletion:cds_exon[130003524,130003623])	no_errors	
ATN1	1822	genome.wustl.edu	37	12	7045035	7045035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	7045035	7045035	C	T	SNP	ATN1	NM_001007026	human	genbank	57_37b	+1	reviewed	missense	c.605	p.T202I	0.014	HMMPfam_Atrophin-1	HMMPfam_Atrophin-1	-	no_errors	
C16orf54	283897	genome.wustl.edu	37	16	29756269	29756269	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	29756269	29756269	G	T	SNP	C16orf54	NM_175900	human	genbank	57_37b	-1	validated	missense	c.4	p.P2T	0.980	NULL	NULL	-	no_errors	
C17orf67	339210	genome.wustl.edu	37	17	54872495	54872495	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	54872495	54872495	T	C	SNP	C17orf67	NM_001085430	human	genbank	57_37b	-1	validated	missense	c.275	p.Q92R	1.000	NULL	NULL	-	no_errors	
CHML	1122	genome.wustl.edu	37	1	241797975	241797975	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	241797975	241797975	T	C	SNP	CHML	NM_001821	human	genbank	57_37b	-1	reviewed	missense	c.1094	p.Q365R	0.997	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GDI	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GDI,superfamily_FAD-linked reductases C-terminal domain	-	no_errors	
DNAH17	8632	genome.wustl.edu	37	17	76455082	76455082	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	76455082	76455082	C	T	SNP	DNAH17	ENST00000389840	human	ensembl	57_37b	-1	known	splice_site	c.9819+1	e60+1	1.000	-	-	-	no_errors	
DYTN	0	genome.wustl.edu	37	2	207572064	207572064	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207572064	207572064	C	T	SNP	DYTN	NM_001093730	human	genbank	57_37b	-1	provisional	silent	c.258	p.P86	0.000	HMMPfam_efhand_1,superfamily_SSF47473	HMMPfam_efhand_1,superfamily_SSF47473,HMMPfam_efhand_2,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1	-	no_errors	
ENSG00000245549	0	genome.wustl.edu	37	1	16950252	16950252	+	RNA	DEL	G	G	-	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16950252	16950252	G	-	DEL	ENSG00000245549	ENST00000501442	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.356	-	-	(deletion:rna[16949246,16951432])	no_errors	
FAM110A	83541	genome.wustl.edu	37	20	825502	825502	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	825502	825502	C	T	SNP	FAM110A	NM_001042353	human	genbank	57_37b	+1	validated	missense	c.55	p.R19C	1.000	NULL	NULL	-	no_errors	
FAM129B	64855	genome.wustl.edu	37	9	130270454	130270454	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	130270454	130270454	A	T	SNP	FAM129B	NM_022833	human	genbank	57_37b	-1	validated	missense	c.1460	p.V487E	1.000	NULL	superfamily_SSF50729,HMMSmart_PH	-	no_errors	
FANCA	2175	genome.wustl.edu	37	16	89815165	89815165	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89815165	89815165	G	A	SNP	FANCA	NM_000135	human	genbank	57_37b	-1	reviewed	missense	c.3250	p.R1084C	0.000	NULL	HMMPfam_Fanconi_A	-	no_errors	
FCRL5	83416	genome.wustl.edu	37	1	157516743	157516743	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	157516743	157516743	A	T	SNP	FCRL5	NM_031281	human	genbank	57_37b	-1	validated	missense	c.297	p.D99E	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
ITGA6	3655	genome.wustl.edu	37	2	173332209	173332209	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	173332209	173332209	C	T	SNP	ITGA6	NM_001079818	human	genbank	57_37b	+1	reviewed	missense	c.308	p.A103V	1.000	superfamily_Integrin alpha N-terminal domain	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA	-	no_errors	
ITSN1	6453	genome.wustl.edu	37	21	35247757	35247757	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	35247757	35247757	C	T	SNP	ITSN1	NM_003024	human	genbank	57_37b	+1	reviewed	missense	c.4273	p.R1425W	1.000	superfamily_DBL homology domain (DH-domain)	HMMSmart_SM00027,superfamily_EF-hand,HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
KIAA1279	26128	genome.wustl.edu	37	10	70764802	70764802	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	70764802	70764802	G	T	SNP	KIAA1279	NM_015634	human	genbank	57_37b	+1	validated	missense	c.526	p.V176F	1.000	superfamily_SSF48452	superfamily_SSF48452	-	no_errors	
LIN9	286826	genome.wustl.edu	37	1	226421155	226421157	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	226421155	226421157	CTT	-	DEL	LIN9	NM_173083	human	genbank	57_37b	-1	provisional	in_frame_del	c.1363_1361	p.E454in_frame_del	1.000:0.924:1.000	NULL	HMMPfam_DIRP	(deletion:cds_exon[226421045,226421224])	no_errors	
LOC100129966	0	genome.wustl.edu	37	11	18617184	18617184	+	RNA	SNP	C	C	T	rs6416020	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	18617184	18617184	C	T	SNP	LOC100129966	XR_038896	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.003	-	-	-		
LOC100286951	0	genome.wustl.edu	37	8	2092910	2092910	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	2092910	2092910	G	C	SNP	LOC100286951	XM_002342813	human	genbank	57_37b	-1	model	missense	c.121	p.R41G	0.000	NULL	NULL	-	no_errors	
MADD	8567	genome.wustl.edu	37	11	47350233	47350233	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47350233	47350233	G	A	SNP	MADD	NM_003682	human	genbank	57_37b	+1	reviewed	missense	c.4817	p.S1606N	1.000	NULL	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMSmart_SM00801,HMMPfam_dDENN	-	no_errors	
MAP4	4134	genome.wustl.edu	37	3	47956413	47956413	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47956413	47956413	C	T	SNP	MAP4	NM_002375	human	genbank	57_37b	-1	reviewed	silent	c.1893	p.T631	0.029	NULL	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors	
METTL2A	339175	genome.wustl.edu	37	17	60512605	60512606	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	60512605	60512606	-	T	INS	METTL2A	NM_181725	human	genbank	57_37b	+1	validated	frame_shift_ins	c.621_622	p.V208fs	1.000:1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors	
MORN1	79906	genome.wustl.edu	37	1	2267971	2267971	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	2267971	2267971	G	A	SNP	MORN1	NM_024848	human	genbank	57_37b	-1	provisional	missense	c.1187	p.S396F	0.002	NULL	superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain,HMMSmart_SM00698,HMMPfam_MORN	-	no_errors	
MYO1F	4542	genome.wustl.edu	37	19	8587693	8587693	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8587693	8587693	G	T	SNP	MYO1F	NM_012335	human	genbank	57_37b	-1	provisional	missense	c.2875	p.P959T	0.970	NULL	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMPfam_Myosin_TH1,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
NELL2	4753	genome.wustl.edu	37	12	45097587	45097587	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	45097587	45097587	T	-	DEL	NELL2	NM_001145107	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.1390	p.R464fs	0.999	superfamily_ConA_like_lec_gl,superfamily_SSF57196,HMMSmart_EGF	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_EGF_1	(deletion:cds_exon[45097509,45097637])	no_errors	
PAPOLA	10914	genome.wustl.edu	37	14	97022708	97022708	+	Silent	SNP	A	G	G	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	97022708	97022708	A	G	SNP	PAPOLA	NM_032632	human	genbank	57_37b	+1	validated	silent	c.1962	p.S654	0.996	NULL	HMMPfam_PAP_central,superfamily_Nucleotidyltransferase,HMMPfam_NTP_transf_2,superfamily_PAP/OAS1 substrate-binding domain,superfamily_PAP/Archaeal CCA-adding enzyme C-terminal domain,HMMPfam_PAP_RNA-bind	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178921553	178921553	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178921553	178921553	T	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1035	p.N345K	1.000	HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PMS1	5378	genome.wustl.edu	37	2	190719470	190719470	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	190719470	190719470	C	T	SNP	PMS1	NM_000534	human	genbank	57_37b	+1	reviewed	missense	c.1472	p.S491L	0.062	NULL	superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c,PatternScan_DNA_MISMATCH_REPAIR_1,superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_DNA_mis_repair,superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors	
PPIP5K1	0	genome.wustl.edu	37	15	43873257	43873257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43873257	43873257	C	T	SNP	PPIP5K1	NM_001130858	human	genbank	57_37b	-1	validated	missense	c.1004	p.G335D	1.000	superfamily_Glutathione synthetase ATP-binding domain-like	superfamily_Glutathione synthetase ATP-binding domain-like,superfamily_Phosphoglycerate mutase-like,HMMPfam_Acid_phosphat_A,PatternScan_HIS_ACID_PHOSPHAT_1	-	no_errors	
RNF175	285533	genome.wustl.edu	37	4	154669848	154669848	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	154669848	154669848	A	G	SNP	RNF175	NM_173662	human	genbank	57_37b	-1	validated	silent	c.195	p.I65	0.806	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors	
RPL7L1	285855	genome.wustl.edu	37	6	42851236	42851236	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	42851236	42851236	A	T	SNP	RPL7L1	NM_198486	human	genbank	57_37b	+1	provisional	silent	c.168	p.L56	0.000	NULL	HMMPfam_Ribosomal_L30,superfamily_Ribosomal_L30,PatternScan_RIBOSOMAL_L30	-	no_errors	
SERPINB6	5269	genome.wustl.edu	37	6	2949205	2949205	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	2949205	2949205	A	T	SNP	SERPINB6	NM_004568	human	genbank	57_37b	-1	validated	silent	c.672	p.V224	0.000	HMMPfam_Serpin,superfamily_Prot_inh_serpin,HMMSmart_SERPIN	HMMPfam_Serpin,superfamily_Prot_inh_serpin,HMMSmart_SERPIN,PatternScan_SERPIN	-	no_errors	
SMYD1	150572	genome.wustl.edu	37	2	88387504	88387504	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	88387504	88387504	C	T	SNP	SMYD1	NM_198274	human	genbank	57_37b	+1	provisional	silent	c.438	p.D146	0.340	superfamily_SSF82199,HMMSmart_SET	superfamily_SSF82199,HMMSmart_SET,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,HMMPfam_SET	-	no_errors	
STAB1	23166	genome.wustl.edu	37	3	52556668	52556668	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52556668	52556668	C	T	SNP	STAB1	NM_015136	human	genbank	57_37b	+1	reviewed	silent	c.6708	p.V2236	0.000	HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00180,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_FAS1 domain,HMMSmart_SM00554,HMMPfam_Fasciclin,PatternScan_CYTOCHROME_P450,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_LAM_1,HMMPfam_Laminin_EGF,superfamily_Growth factor receptor domain,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-	no_errors	
USP53	54532	genome.wustl.edu	37	4	120182931	120182931	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	120182931	120182931	T	A	SNP	USP53	NM_019050	human	genbank	57_37b	+1	validated	missense	c.884	p.I295N	1.000	superfamily_SSF54001,HMMPfam_UCH	superfamily_SSF54001,HMMPfam_UCH	-	no_errors	
ZFP42	132625	genome.wustl.edu	37	4	188924860	188924860	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TR-01	TCGA-AR-A0TR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	188924860	188924860	C	T	SNP	ZFP42	NM_174900	human	genbank	57_37b	+1	validated	missense	c.899	p.A300V	0.011	superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
