Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ARID2	196528	genome.wustl.edu	37	12	46245859	46245860	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	46245859	46245860	-	G	INS	ARID2	NM_152641	human	genbank	57_37b	+1	validated	frame_shift_ins	c.3953_3954	p.C1319fs	1.000:1.000	NULL	"HMMPfam_ARID,superfamily_ARID-like,HMMSmart_SM00501,superfamily_""Winged helix"" DNA-binding domain,PatternScan_ZINC_FINGER_C2H2_1"	-	no_errors	
ATP12A	479	genome.wustl.edu	37	13	25264568	25264568	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25264568	25264568	G	T	SNP	ATP12A	NM_001676	human	genbank	57_37b	+1	reviewed	missense	c.639	p.Q213H	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors	
C16orf62	57020	genome.wustl.edu	37	16	19656250	19656250	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	19656250	19656250	G	C	SNP	C16orf62	NM_020314	human	genbank	57_37b	+1	predicted	missense	c.1908	p.L636F	0.999	NULL	NULL	-	no_errors	
C18orf34	374864	genome.wustl.edu	37	18	30803162	30803162	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	30803162	30803162	G	C	SNP	C18orf34	NM_001105528	human	genbank	57_37b	-1	validated	missense	c.1840	p.Q614E	0.002	NULL	NULL	-	no_errors	
C1QTNF9B	387911	genome.wustl.edu	37	13	24466087	24466087	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	24466087	24466087	G	T	SNP	C1QTNF9B	NM_001007537	human	genbank	57_37b	-1	provisional	silent	c.343	p.R115	0.005	HMMPfam_Collagen	HMMPfam_Collagen,HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	-	no_errors	
C3orf70	285382	genome.wustl.edu	37	3	184801097	184801097	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	184801097	184801097	C	T	SNP	C3orf70	NM_001025266	human	genbank	57_37b	-1	predicted	missense	c.451	p.A151T	0.001	NULL	NULL	-	no_errors	
COL17A1	1308	genome.wustl.edu	37	10	105792444	105792444	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105792444	105792444	T	G	SNP	COL17A1	NM_000494	human	genbank	57_37b	-1	reviewed	missense	c.4426	p.K1476Q	1.000	HMMPfam_Collagen	HMMPfam_Collagen	-	no_errors	
DNAH8	1769	genome.wustl.edu	37	6	38834385	38834385	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	38834385	38834385	C	T	SNP	DNAH8	NM_001371	human	genbank	57_37b	+1	validated	missense	c.5866	p.R1956C	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
EHHADH	1962	genome.wustl.edu	37	3	184910162	184910162	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	184910162	184910162	A	G	SNP	EHHADH	NM_001966	human	genbank	57_37b	-1	reviewed	missense	c.2024	p.V675A	0.960	superfamily_6DGDH_C_like,HMMPfam_3HCDH	superfamily_SSF52096,HMMPfam_ECH,PatternScan_ENOYL_COA_HYDRATASE,superfamily_NAD(P)-bd,HMMPfam_3HCDH_N,PatternScan_3HCDH,superfamily_6DGDH_C_like,HMMPfam_3HCDH	-	no_errors	
EMILIN2	84034	genome.wustl.edu	37	18	2891304	2891304	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	2891304	2891304	G	A	SNP	EMILIN2	NM_032048	human	genbank	57_37b	+1	validated	silent	c.1179	p.Q393	0.000	NULL	HMMPfam_EMI,superfamily_TNF_like,HMMPfam_C1q	-	no_errors	
ENSG00000247772	0	genome.wustl.edu	37	11	47377511	47377514	+	RNA	DEL	CACT	CACT	-	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	CACT	CACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47377511	47377514	CACT	-	DEL	ENSG00000247772	ENST00000499849	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.001:0.003:0.003:0.003	-	-	(deletion:rna[47376886,47379300])	no_errors	
FAM136A	84908	genome.wustl.edu	37	2	70528827	70528827	+	Missense_Mutation	SNP	G	G	A	rs2279159	byCluster;by2Hit2Allele;by1000genomes	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	70528827	70528827	G	A	SNP	FAM136A	ENST00000430566	human	ensembl	57_37b	-1	known	missense	c.317	p.P106L	0.000	HMMPfam_DUF842	HMMPfam_DUF842	-		
FH	2271	genome.wustl.edu	37	1	241676972	241676972	+	Silent	SNP	G	G	A	rs10926501	byCluster;byFrequency;by1000genomes	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	241676972	241676972	G	A	SNP	FH	NM_000143	human	genbank	57_37b	-1	reviewed	silent	c.309	p.A103	0.998	superfamily_L-aspartase-like,HMMPfam_Lyase_1	superfamily_L-aspartase-like,HMMPfam_Lyase_1,PatternScan_FUMARATE_LYASES,HMMPfam_FumaraseC_C	-		
FNIP1	96459	genome.wustl.edu	37	5	131014737	131014737	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	131014737	131014737	T	C	SNP	FNIP1	NM_133372	human	genbank	57_37b	-1	validated	missense	c.1334	p.N445S	1.000	NULL	NULL	-	no_errors	
FXR1	8087	genome.wustl.edu	37	3	180669241	180669241	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	180669241	180669241	C	A	SNP	FXR1	NM_005087	human	genbank	57_37b	+1	reviewed	missense	c.786	p.F262L	1.000	superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	HMMPfam_Agenet,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors	
GALNTL6	0	genome.wustl.edu	37	4	172735562	172735562	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	172735562	172735562	G	A	SNP	GALNTL6	NM_001034845	human	genbank	57_37b	+1	validated	splice_site	c.1-1	e1-1	1.000	-	-	-	no_errors	
HMCN1	83872	genome.wustl.edu	37	1	186050417	186050417	+	Missense_Mutation	SNP	A	A	G	rs10798035	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	186050417	186050417	A	G	SNP	HMCN1	NM_031935	human	genbank	57_37b	+1	reviewed	missense	c.8678	p.E2893G	1.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_vWA-like,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00406,PatternScan_CECROPIN,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,PatternScan_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,PatternScan_EGF_2	-		
ICK	22858	genome.wustl.edu	37	6	52878680	52878680	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	52878680	52878680	G	A	SNP	ICK	NM_014920	human	genbank	57_37b	-1	reviewed	missense	c.932	p.A311V	0.105	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
LOC100293436	0	genome.wustl.edu	37	19	1535084	1535084	+	Silent	SNP	G	G	A	rs12984316	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1535084	1535084	G	A	SNP	LOC100293436	XM_002345191	human	genbank	57_37b	+1	model	silent	c.507	p.P169	0.001	NULL	NULL	-		
LOC647012	647012	genome.wustl.edu	37	2	139655094	139655094	+	RNA	SNP	G	A	A	rs1351915	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	139655094	139655094	G	A	SNP	LOC647012	XR_017217	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-		
LOC647166	647166	genome.wustl.edu	37	13	51686025	51686026	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	51686025	51686026	-	G	INS	LOC647166	XM_930192	human	genbank	57_37b	-1	model	frame_shift_ins	c.335_334	p.H112fs	0.029:0.000	NULL	NULL	-	no_errors	
LONRF2	164832	genome.wustl.edu	37	2	100910844	100910844	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	100910844	100910844	G	T	SNP	LONRF2	NM_198461	human	genbank	57_37b	-1	validated	missense	c.1604	p.T535N	1.000	NULL	superfamily_TPR-like,superfamily_RING/U-box,HMMSmart_SM00184,HMMSmart_SM00028,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_LON,HMMSmart_SM00464	-	no_errors	
MLL3	58508	genome.wustl.edu	37	7	151927054	151927054	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	151927054	151927054	C	T	SNP	MLL3	NM_170606	human	genbank	57_37b	-1	reviewed	missense	c.2930	p.C977Y	1.000	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,PatternScan_ATPASE_ALPHA_BETA,HMMSmart_SM00398,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MYCT1	80177	genome.wustl.edu	37	6	153043015	153043015	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	153043015	153043015	C	A	SNP	MYCT1	NM_025107	human	genbank	57_37b	+1	validated	missense	c.335	p.S112Y	0.083	NULL	NULL	-	no_errors	
NEK10	152110	genome.wustl.edu	37	3	27204052	27204052	+	Silent	SNP	G	G	A	rs17854381	byCluster;by1000genomes	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	27204052	27204052	G	A	SNP	NEK10	ENST00000396636	human	ensembl	57_37b	-1	known	silent	c.2910	p.H970	1.000	NULL	superfamily_ARM repeat,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-		
OR13C4	138804	genome.wustl.edu	37	9	107288781	107288781	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	107288781	107288781	G	T	SNP	OR13C4	NM_001001919	human	genbank	57_37b	-1	provisional	missense	c.710	p.A237E	0.997	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2AK2	391191	genome.wustl.edu	37	1	248128766	248128766	+	Missense_Mutation	SNP	G	G	A	rs113103144	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248128766	248128766	G	A	SNP	OR2AK2	NM_001004491	human	genbank	57_37b	+1	provisional	missense	c.133	p.V45I	0.000	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
PABPC1	26986	genome.wustl.edu	37	8	101716544	101716544	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	101716544	101716544	G	A	SNP	PABPC1	NM_002568	human	genbank	57_37b	-1	validated	silent	c.1893	p.T631	0.935	superfamily_PABC (PABP) domain	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMSmart_SM00361,superfamily_PABC (PABP) domain,HMMPfam_PABP,HMMSmart_SM00517	-	no_errors	
PIK3R1	5295	genome.wustl.edu	37	5	67591104	67591115	+	In_Frame_Del	DEL	TTAAACCAGACC	TTAAACCAGACC	-	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	TTAAACCAGACC	TTAAACCAGACC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	67591104	67591115	TTAAACCAGACC	-	DEL	PIK3R1	NM_181523	human	genbank	57_37b	+1	reviewed	in_frame_del	c.1697_1708	p.KPDL567in_frame_del	1.000:0.993:1.000:1.000:0.892:1.000:1.000:0.152:1.000:1.000:1.000:1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	(deletion:cds_exon[67590976,67591152])	no_errors	
PKD2L1	9033	genome.wustl.edu	37	10	102049824	102049824	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	102049824	102049824	G	C	SNP	PKD2L1	NM_016112	human	genbank	57_37b	-1	reviewed	nonsense	c.2198	p.S733*	0.391	NULL	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels	-	no_errors	
PRDM6	93166	genome.wustl.edu	37	5	122491674	122491674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	122491674	122491674	G	A	SNP	PRDM6	NM_001136239	human	genbank	57_37b	+1	validated	missense	c.997	p.G333R	1.000	HMMSmart_SM00317,superfamily_SET domain,HMMPfam_SET	HMMSmart_SM00317,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
RHBDD1	84236	genome.wustl.edu	37	2	227731981	227731981	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	227731981	227731981	G	T	SNP	RHBDD1	NM_032276	human	genbank	57_37b	+1	validated	silent	c.513	p.P171	0.979	HMMPfam_Rhomboid	HMMPfam_Rhomboid	-	no_errors	
SELL	6402	genome.wustl.edu	37	1	169679648	169679648	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169679648	169679648	C	T	SNP	SELL	NM_000655	human	genbank	57_37b	-1	reviewed	nonsense	c.14	p.W5*	0.622	NULL	HMMSmart_CLECT,superfamily_C-type_lectin_fold,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors	
TGM6	343641	genome.wustl.edu	37	20	2377157	2377157	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	2377157	2377157	G	A	SNP	TGM6	NM_198994	human	genbank	57_37b	+1	validated	missense	c.430	p.D144N	0.011	superfamily_Cysteine proteinases	HMMPfam_Transglut_N,superfamily_E set domains,superfamily_Cysteine proteinases,HMMSmart_SM00460,HMMPfam_Transglut_core,PatternScan_TRANSGLUTAMINASES,superfamily_Transglutaminase two C-terminal domains,HMMPfam_Transglut_C	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578268	7578268	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578268	7578268	A	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.581	p.L194R	0.996	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179593823	179593823	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179593823	179593823	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	silent	c.15210	p.T5070	0.002	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179650411	179650411	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179650411	179650411	C	T	SNP	TTN	NM_133379	human	genbank	57_37b	-1	reviewed	missense	c.2429	p.R810H	1.000	NULL	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_Titin_Z,HMMPfam_ig,PatternScan_IG_MHC,PatternScan_THIOL_PROTEASE_HIS	-	no_errors	
VWA3A	146177	genome.wustl.edu	37	16	22126692	22126692	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	22126692	22126692	A	-	DEL	VWA3A	NM_173615	human	genbank	57_37b	+1	validated	frame_shift_del	c.714	p.K239fs	0.052	superfamily_vWA-like	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	(deletion:cds_exon[22126668,22126793])	no_errors	
ZNF200	7752	genome.wustl.edu	37	16	3274374	3274374	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3274374	3274374	C	G	SNP	ZNF200	NM_003454	human	genbank	57_37b	-1	validated	missense	c.706	p.D236H	0.985	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF28	7576	genome.wustl.edu	37	19	53304396	53304396	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U0-01	TCGA-AR-A0U0-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53304396	53304396	C	T	SNP	ZNF28	NM_006969	human	genbank	57_37b	-1	validated	silent	c.543	p.Q181	0.054	superfamily_SSF57667,HMMSmart_ZnF_C2H2	superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
