Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AP1G2	8906	genome.wustl.edu	37	14	24035346	24035346	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24035346	24035346	C	T	SNP	AP1G2	NM_003917	human	genbank	57_37b	-1	reviewed	missense	c.495	p.M165I	1.000	superfamily_ARM-type_fold,HMMPfam_Adaptin_N	superfamily_ARM-type_fold,HMMPfam_Adaptin_N,superfamily_Clath_adapt,HMMPfam_Alpha_adaptinC2,HMMSmart_Alpha_adaptinC2	-	no_errors	
ATN1	1822	genome.wustl.edu	37	12	7045891	7045892	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	7045891	7045892	-	CAG	INS	ATN1	NM_001007026	human	genbank	57_37b	+1	reviewed	in_frame_ins	c.1461_1462	p.491in_frame_insQ	0.002:0.834	HMMPfam_Atrophin-1	HMMPfam_Atrophin-1	-	no_errors	
ATP12A	479	genome.wustl.edu	37	13	25281421	25281421	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25281421	25281421	C	T	SNP	ATP12A	NM_001676	human	genbank	57_37b	+1	reviewed	silent	c.2343	p.R781	1.000	superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors	
ATP5SL	55101	genome.wustl.edu	37	19	41939224	41939224	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41939224	41939224	A	G	SNP	ATP5SL	NM_018035	human	genbank	57_37b	-1	validated	silent	c.549	p.G183	0.237	superfamily_RNI-like	superfamily_RNI-like	-	no_errors	
BCMO1	53630	genome.wustl.edu	37	16	81279117	81279117	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	81279117	81279117	C	T	SNP	BCMO1	ENST00000425577	human	ensembl	57_37b	+1	known	nonsense	c.25	p.Q9*	0.852	HMMPfam_RPE65	HMMPfam_RPE65	-	no_errors	
BIN1	274	genome.wustl.edu	37	2	127806177	127806177	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	127806177	127806177	G	A	SNP	BIN1	NM_139343	human	genbank	57_37b	-1	reviewed	silent	c.1707	p.S569	0.075	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	HMMSmart_SM00721,HMMPfam_BAR,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
C6orf10	10665	genome.wustl.edu	37	6	32307260	32307260	+	Silent	SNP	T	T	G	rs114284308	byCluster;by1000genomes	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32307260	32307260	T	G	SNP	C6orf10	ENST00000305725	human	ensembl	57_37b	-1	known	silent	c.360	p.I120	0.001	NULL	NULL	-		
CCDC136	64753	genome.wustl.edu	37	7	128434806	128434806	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128434806	128434806	G	A	SNP	CCDC136	NM_022742	human	genbank	57_37b	+1	validated	silent	c.330	p.Q110	1.000	NULL	superfamily_Prefoldin,superfamily_Spectrin repeat	-	no_errors	
CDCA7	83879	genome.wustl.edu	37	2	174230273	174230273	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	174230273	174230273	G	A	SNP	CDCA7	NM_031942	human	genbank	57_37b	+1	reviewed	missense	c.988	p.E330K	0.998	NULL	HMMPfam_zf-4CXXC_R1	-	no_errors	
EIF2AK3	9451	genome.wustl.edu	37	2	88857363	88857364	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	88857363	88857364	-	C	INS	EIF2AK3	NM_004836	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.3242_3241	p.D1081fs	1.000:1.000	superfamily_Protein kinase-like (PK-like)	superfamily_Quinoprotein alcohol dehydrogenase-like,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
ENSG00000207242	0	genome.wustl.edu	37	17	10761290	10761290	+	RNA	DEL	A	A	-	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10761290	10761290	A	-	DEL	ENSG00000207242	ENST00000384513	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.010	-	-	(deletion:rna[10761216,10761321])	no_errors	
ENSG00000237029	0	genome.wustl.edu	37	8	86555155	86555155	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	86555155	86555155	G	A	SNP	ENSG00000237029	ENST00000456858	human	ensembl	57_37b	-1	known	silent	c.1545	p.Y515	0.960	superfamily_Ribonuclease H-like,HMMSmart_SM00479,HMMPfam_Exonuc_X-T	superfamily_Ribonuclease H-like,HMMSmart_SM00479,HMMPfam_Exonuc_X-T	-	no_errors	
ENSG00000245258	0	genome.wustl.edu	37	17	80407039	80407039	+	RNA	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	80407039	80407039	G	A	SNP	ENSG00000245258	ENST00000499731	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.231	-	-	-	no_errors	
FANCA	2175	genome.wustl.edu	37	16	89836576	89836576	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89836576	89836576	G	-	DEL	FANCA	NM_000135	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.2314	p.Q772fs	1.000	NULL	HMMPfam_Fanconi_A	(deletion:cds_exon[89836574,89836667])	no_errors	
FER1L5	90342	genome.wustl.edu	37	2	97351984	97351984	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	97351984	97351984	G	A	SNP	FER1L5	NM_001113382	human	genbank	57_37b	+1	provisional	missense	c.2111	p.R704Q	0.996	HMMPfam_FerB	HMMSmart_SM00239,HMMPfam_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerI,HMMPfam_FerB,HMMSmart_SM00693,HMMSmart_SM00694	-	no_errors	
GIPC3	126326	genome.wustl.edu	37	19	3590123	3590123	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	3590123	3590123	T	-	DEL	GIPC3	NM_133261	human	genbank	57_37b	+1	validated	frame_shift_del	c.874	p.F292fs	1.000	NULL	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	(deletion:cds_exon[3590037,3590188])	no_errors	
GPC5	2262	genome.wustl.edu	37	13	92345973	92345973	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	92345973	92345973	G	A	SNP	GPC5	NM_004466	human	genbank	57_37b	+1	reviewed	silent	c.858	p.A286	0.060	HMMPfam_Glypican	HMMPfam_Glypican,PatternScan_GLYPICAN	-	no_errors	
GPR32	2854	genome.wustl.edu	37	19	51274851	51274851	+	Missense_Mutation	SNP	A	A	C	rs78840344	byCluster	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51274851	51274851	A	C	SNP	GPR32	NM_001506	human	genbank	57_37b	+1	provisional	missense	c.994	p.T332P	0.018	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
IGHV3-6	0	genome.wustl.edu	37	14	106322070	106322070	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	106322070	106322070	T	A	SNP	IGHV3-6	ENST00000426581	human	ensembl	57_37b	-1	known	missense	c.692	p.H231L	0.004	superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors	
LOC100130171	0	genome.wustl.edu	37	2	174296170	174296170	+	RNA	SNP	T	T	C	rs6759114	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	174296170	174296170	T	C	SNP	LOC100130171	XR_038684	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.003	-	-	-		
LOC283398	283398	genome.wustl.edu	37	12	94942395	94942395	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	94942395	94942395	A	T	SNP	LOC283398	XM_208658	human	genbank	57_37b	+1	model	missense	c.715	p.T239S	0.998	superfamily_Glutathione synthetase ATP-binding domain-like,HMMPfam_ATP-grasp_2	superfamily_Glutathione synthetase ATP-binding domain-like,HMMPfam_ATP-grasp_2,superfamily_Succinyl-CoA synthetase domains,HMMPfam_Ligase_CoA,PatternScan_SUCCINYL_COA_LIG_3	-	no_errors	
LOC391073	391073	genome.wustl.edu	37	1	119977703	119977703	+	RNA	SNP	C	C	T	rs7540738	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	119977703	119977703	C	T	SNP	LOC391073	XR_016552	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.221	-	-	-		
LOC728531	728531	genome.wustl.edu	37	1	224191297	224191310	+	Frame_Shift_Del	DEL	TCAGATGCCTGGTA	TCAGATGCCTGGTA	-	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	TCAGATGCCTGGTA	TCAGATGCCTGGTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	224191297	224191310	TCAGATGCCTGGTA	-	DEL	LOC728531	XM_001130913	human	genbank	57_37b	+1	model	frame_shift_del	c.129_142	p.C43fs	0.985:0.998:0.999:1.000:1.000:1.000:1.000:1.000:1.000:0.997:1.000:1.000:1.000:1.000	HMMPfam_Septin	HMMPfam_Septin	(deletion:cds_exon[224191222,224191356])	no_errors	
LPHN3	23284	genome.wustl.edu	37	4	62935938	62935938	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	62935938	62935938	T	G	SNP	LPHN3	NM_015236	human	genbank	57_37b	+1	reviewed	missense	c.3722	p.V1241G	1.000	HMMPfam_Latrophilin	HMMPfam_Gal_Lectin,HMMPfam_OLF,HMMSmart_SM00284,HMMSmart_SM00008,HMMPfam_HRM,superfamily_Family A G protein-coupled receptor-like,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2,HMMPfam_Latrophilin	-	no_errors	
LRRC4B	94030	genome.wustl.edu	37	19	51022088	51022088	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51022088	51022088	G	A	SNP	LRRC4B	NM_001080457	human	genbank	57_37b	-1	provisional	silent	c.882	p.H294	1.000	superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	-	no_errors	
MTR	4548	genome.wustl.edu	37	1	236959013	236959013	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236959013	236959013	G	A	SNP	MTR	NM_000254	human	genbank	57_37b	+1	reviewed	missense	c.10	p.A4T	0.159	NULL	superfamily_Homocysteine S-methyltransferase,HMMPfam_S-methyl_trans,HMMPfam_Pterin_bind,superfamily_Dihydropteroate synthetase-like,superfamily_Methionine synthase domain,HMMPfam_B12-binding_2,superfamily_Cobalamin (vitamin B12)-binding domain,HMMPfam_B12-binding,superfamily_Methionine synthase activation domain-like,HMMPfam_Met_synt_B12	-	no_errors	
MUC4	4585	genome.wustl.edu	37	3	195510762	195510762	+	Silent	SNP	G	G	A	rs2911273	byCluster	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195510762	195510762	G	A	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	silent	c.7689	p.V2563	0.018	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-		
OBSCN	84033	genome.wustl.edu	37	1	228468458	228468458	+	Missense_Mutation	SNP	G	A	A	rs1188697	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	228468458	228468458	G	A	SNP	OBSCN	NM_001098623	human	genbank	57_37b	+1	reviewed	missense	c.8158	p.V2720M	0.017	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_V-set,HMMSmart_SM00015,HMMPfam_IQ,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Protein kinase-like (PK-like),PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,PatternScan_PROTEIN_KINASE_TYR	-		
OR51A7	119687	genome.wustl.edu	37	11	4929530	4929530	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4929530	4929530	G	T	SNP	OR51A7	NM_001004749	human	genbank	57_37b	+1	provisional	missense	c.931	p.G311W	0.006	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PARP3	10039	genome.wustl.edu	37	3	51981815	51981815	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51981815	51981815	C	A	SNP	PARP3	NM_001003931	human	genbank	57_37b	+1	reviewed	missense	c.1357	p.L453M	0.883	superfamily_SSF56399,HMMPfam_PARP	HMMPfam_WGR,HMMSmart_WGR,superfamily_PARP_reg,HMMPfam_PARP_reg,superfamily_SSF56399,HMMPfam_PARP	-	no_errors	
PLEKHA9	51054	genome.wustl.edu	37	12	45567083	45567083	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	45567083	45567083	C	T	SNP	PLEKHA9	NM_015899	human	genbank	57_37b	-1	provisional	missense	c.1066	p.V356I	0.124	superfamily_Glycolipid_transfer_prot,HMMPfam_GLTP	superfamily_Glycolipid_transfer_prot,HMMPfam_GLTP	-	no_errors	
RARB	5915	genome.wustl.edu	37	3	25542800	25542800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	25542800	25542800	G	A	SNP	RARB	NM_000965	human	genbank	57_37b	+1	reviewed	missense	c.434	p.G145E	1.000	superfamily_SSF57716,HMMSmart_ZnF_C4,HMMPfam_zf-C4,superfamily_Str_ncl_receptor	superfamily_SSF57716,HMMSmart_ZnF_C4,HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep	-	no_errors	
ROCK1	6093	genome.wustl.edu	37	18	18586384	18586384	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	18586384	18586384	G	A	SNP	ROCK1	NM_005406	human	genbank	57_37b	-1	reviewed	nonsense	c.1813	p.Q605*	1.000	NULL	PatternScan_ZF_DAG_PE_1,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C,HMMPfam_HR1,HMMPfam_Rho_Binding,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_SSF57889,HMMPfam_C1_1,HMMSmart_C1	-	no_errors	
SLC20A2	6575	genome.wustl.edu	37	8	42297142	42297142	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	42297142	42297142	G	A	SNP	SLC20A2	NM_006749	human	genbank	57_37b	-1	provisional	nonsense	c.760	p.R254*	0.017	HMMPfam_PHO4	HMMPfam_PHO4	-	no_errors	
SLC35F4	341880	genome.wustl.edu	37	14	58048140	58048140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	58048140	58048140	C	T	SNP	SLC35F4	NM_001080455	human	genbank	57_37b	-1	provisional	missense	c.707	p.R236Q	1.000	NULL	superfamily_Multidrug resistance efflux transporter EmrE,HMMPfam_DUF6	-	no_errors	
SNCAIP	9627	genome.wustl.edu	37	5	121726839	121726839	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	121726839	121726839	C	T	SNP	SNCAIP	NM_005460	human	genbank	57_37b	+1	reviewed	missense	c.10	p.P4S	1.000	NULL	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-	no_errors	
TIE1	7075	genome.wustl.edu	37	1	43773137	43773137	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	43773137	43773137	G	A	SNP	TIE1	NM_005424	human	genbank	57_37b	+1	provisional	silent	c.807	p.Q269	1.000	HMMPfam_Laminin_EGF	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig,HMMSmart_EGF,HMMPfam_Laminin_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196,HMMPfam_EGF_2,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179425252	179425252	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179425252	179425252	G	T	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.77897	p.P25966H	0.992	HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179449558	179449558	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179449558	179449558	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	nonsense	c.57100	p.R19034*	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors	
TUBGCP6	85378	genome.wustl.edu	37	22	50682865	50682865	+	Silent	SNP	G	A	A	rs5771270	byCluster;by2Hit2Allele;by1000genomes	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	50682865	50682865	G	A	SNP	TUBGCP6	NM_020461	human	genbank	57_37b	-1	reviewed	silent	c.24	p.F8	0.985	NULL	HMMPfam_Spc97_Spc98	-		
ZNF800	168850	genome.wustl.edu	37	7	127026205	127026205	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0IN-01	TCGA-B6-A0IN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	127026205	127026205	A	G	SNP	ZNF800	ENST00000265827	human	ensembl	57_37b	-1	known	silent	c.66	p.Y22	1.000	NULL	HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
