Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABL2	27	genome.wustl.edu	37	1	179078567	179078567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	179078567	179078567	C	T	SNP	ABL2	NM_007314	human	genbank	57_37b	-1	reviewed	missense	c.1835	p.R612K	1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_F_actin_bind,HMMSmart_SM00808	-	no_errors	
AFG3L2	10939	genome.wustl.edu	37	18	12329635	12329635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	12329635	12329635	C	T	SNP	AFG3L2	NM_006796	human	genbank	57_37b	-1	reviewed	missense	c.2323	p.G775S	1.000	NULL	HMMPfam_FtsH_ext,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,PatternScan_AAA,HMMPfam_Peptidase_M41	-	no_errors	
ARHGEF18	23370	genome.wustl.edu	37	19	7504982	7504982	+	Silent	SNP	C	C	T	rs10422503	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7504982	7504982	C	T	SNP	ARHGEF18	NM_001130955	human	genbank	57_37b	+1	reviewed	silent	c.156	p.G52	0.000	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,HMMPfam_PH,superfamily_PH domain-like,HMMSmart_SM00233	-		
C11orf16	56673	genome.wustl.edu	37	11	8953721	8953721	+	Silent	SNP	T	T	G	rs34856936	byCluster;byFrequency;by1000genomes	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	8953721	8953721	T	G	SNP	C11orf16	NM_020643	human	genbank	57_37b	-1	validated	silent	c.135	p.A45	0.001	NULL	NULL	-		
C4orf35	85438	genome.wustl.edu	37	4	71200897	71200897	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71200897	71200897	C	T	SNP	C4orf35	NM_033122	human	genbank	57_37b	+1	validated	silent	c.141	p.H47	0.095	NULL	NULL	-	no_errors	
CCNF	899	genome.wustl.edu	37	16	2499388	2499388	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2499388	2499388	A	C	SNP	CCNF	NM_001761	human	genbank	57_37b	+1	reviewed	missense	c.1324	p.T442P	1.000	HMMPfam_Cyclin_C,superfamily_Cyclin_like,HMMSmart_CYCLIN	superfamily_SSF81383,HMMPfam_F-box,HMMSmart_FBOX,HMMPfam_Cyclin_N,superfamily_Cyclin_like,PatternScan_CYCLINS,HMMSmart_CYCLIN,HMMPfam_Cyclin_C	-	no_errors	
CIRH1A	84916	genome.wustl.edu	37	16	69184739	69184739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69184739	69184739	C	T	SNP	CIRH1A	NM_032830	human	genbank	57_37b	+1	reviewed	missense	c.934	p.R312C	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
COL5A1	1289	genome.wustl.edu	37	9	137591855	137591855	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	137591855	137591855	G	A	SNP	COL5A1	NM_000093	human	genbank	57_37b	+1	reviewed	silent	c.378	p.Q126	1.000	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors	
DNASE1L3	1776	genome.wustl.edu	37	3	58190568	58190568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	58190568	58190568	C	T	SNP	DNASE1L3	NM_004944	human	genbank	57_37b	-1	reviewed	missense	c.361	p.D121N	0.983	HMMSmart_SM00476,HMMPfam_Exo_endo_phos,superfamily_DNase I-like	HMMSmart_SM00476,HMMPfam_Exo_endo_phos,superfamily_DNase I-like,PatternScan_DNASE_I_1,PatternScan_DNASE_I_2	-	no_errors	
ENSG00000205653	0	genome.wustl.edu	37	6	203722	203722	+	Missense_Mutation	SNP	T	T	G	rs80014302	byCluster;byFrequency;by1000genomes	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	203722	203722	T	G	SNP	ENSG00000205653	ENST00000381078	human	ensembl	57_37b	+1	known	missense	c.290	p.L97R	0.081	NULL	NULL	-		
ENSG00000247078	0	genome.wustl.edu	37	3	119365696	119365696	+	RNA	SNP	G	G	A	rs6794067	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119365696	119365696	G	A	SNP	ENSG00000247078	ENST00000500908	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-		
FAM47C	442444	genome.wustl.edu	37	X	37027222	37027222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	37027222	37027222	C	T	SNP	FAM47C	NM_001013736	human	genbank	57_37b	+1	provisional	missense	c.739	p.R247C	0.090	NULL	NULL	-	no_errors	
GALNT12	79695	genome.wustl.edu	37	9	101589095	101589095	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	101589095	101589095	C	T	SNP	GALNT12	NM_024642	human	genbank	57_37b	+1	validated	silent	c.603	p.R201	0.133	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMPfam_Ricin_B_lectin,HMMSmart_SM00458	-	no_errors	
GATA3	2625	genome.wustl.edu	37	10	8115948	8115960	+	Frame_Shift_Del	DEL	CCACACCACCCCT	CCACACCACCCCT	-	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	CCACACCACCCCT	CCACACCACCCCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8115948	8115960	CCACACCACCCCT	-	DEL	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1297_1309	p.H434fs	1.000:1.000:0.979:1.000:1.000:0.946:1.000:1.000:0.921:0.998:0.980:0.290:1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	(deletion:cds_exon[8115702,8115986])	no_errors	
GYS1	2997	genome.wustl.edu	37	19	49472669	49472669	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49472669	49472669	G	A	SNP	GYS1	NM_002103	human	genbank	57_37b	-1	reviewed	missense	c.2090	p.A697V	0.993	NULL	HMMPfam_Glycogen_syn,superfamily_SSF53756	-	no_errors	
IFI35	3430	genome.wustl.edu	37	17	41164295	41164295	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	41164295	41164295	G	A	SNP	IFI35	NM_005533	human	genbank	57_37b	+1	validated	splice_site	c.120+1	e2+1	0.992	-	-	-	no_errors	
IGHV3-30	0	genome.wustl.edu	37	14	106791268	106791268	+	Missense_Mutation	SNP	C	C	T	rs3764180	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	106791268	106791268	C	T	SNP	IGHV3-30	ENST00000390613	human	ensembl	57_37b	-1	known	missense	c.88	p.V30M	0.145	HMMPfam_V-set,superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00406	-		
IQCA1	79781	genome.wustl.edu	37	2	237308121	237308121	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	237308121	237308121	T	G	SNP	IQCA1	NM_024726	human	genbank	57_37b	-1	provisional	missense	c.1145	p.E382A	0.289	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA	-	no_errors	
ITSN2	50618	genome.wustl.edu	37	2	24531572	24531572	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	24531572	24531572	G	A	SNP	ITSN2	NM_006277	human	genbank	57_37b	-1	reviewed	missense	c.707	p.S236L	1.000	NULL	superfamily_EF-hand,HMMSmart_SM00027,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,HMMPfam_SH3_2,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
KLF7	8609	genome.wustl.edu	37	2	207998800	207998800	+	Silent	SNP	C	C	T	rs2284934	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207998800	207998800	C	T	SNP	KLF7	ENST00000435602	human	ensembl	57_37b	-1	known	silent	c.9	p.P3	0.901	NULL	NULL	-		
MLL	4297	genome.wustl.edu	37	11	118363887	118363912	+	Frame_Shift_Del	DEL	AGCCTTTAGATCTAGAAGGAGTCAAG	AGCCTTTAGATCTAGAAGGAGTCAAG	-	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	AGCCTTTAGATCTAGAAGGAGTCAAG	AGCCTTTAGATCTAGAAGGAGTCAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	118363887	118363912	AGCCTTTAGATCTAGAAGGAGTCAAG	-	DEL	MLL	NM_005933	human	genbank	57_37b	+1	validated	frame_shift_del	c.5111_5136	p.P1705fs	1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.993:1.000:1.000:1.000:1.000:1.000:0.994:1.000:1.000:0.993:1.000:1.000:0.999:1.000:1.000:1.000	HMMSmart_SM00297,superfamily_Bromodomain	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMPfam_zf-CXXC,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,PatternScan_RECR,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_FYRN,HMMSmart_SM00541,PatternScan_EF_HAND_1,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	(deletion:cds_exon[118363772,118363945])	no_errors	
MTUS2	0	genome.wustl.edu	37	13	29600570	29600570	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	29600570	29600570	C	T	SNP	MTUS2	NM_001033602	human	genbank	57_37b	+1	validated	missense	c.1765	p.R589C	0.000	NULL	NULL	-	no_errors	
MUC5B	727897	genome.wustl.edu	37	11	1269750	1269750	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1269750	1269750	C	-	DEL	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	frame_shift_del	c.11649	p.P3884fs	0.000	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	(deletion:cds_exon[1262081,1272973])	no_errors	
NEDD4L	23327	genome.wustl.edu	37	18	55990551	55990551	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	55990551	55990551	G	A	SNP	NEDD4L	NM_001144967	human	genbank	57_37b	+1	validated	silent	c.498	p.Q166	0.998	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
PELI2	57161	genome.wustl.edu	37	14	56757012	56757012	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	56757012	56757012	C	T	SNP	PELI2	NM_021255	human	genbank	57_37b	+1	validated	silent	c.534	p.P178	0.665	HMMPfam_Pellino	HMMPfam_Pellino	-	no_errors	
PIM2	11040	genome.wustl.edu	37	X	48772372	48772372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48772372	48772372	G	A	SNP	PIM2	NM_006875	human	genbank	57_37b	-1	reviewed	missense	c.520	p.R174C	0.121	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
RAB3GAP2	25782	genome.wustl.edu	37	1	220325077	220325077	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220325077	220325077	G	C	SNP	RAB3GAP2	NM_012414	human	genbank	57_37b	-1	reviewed	silent	c.3897	p.V1299	0.956	NULL	NULL	-	no_errors	
RAI1	10743	genome.wustl.edu	37	17	17697697	17697697	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	17697697	17697697	C	T	SNP	RAI1	NM_030665	human	genbank	57_37b	+1	reviewed	nonsense	c.1435	p.Q479*	1.000	NULL	HMMSmart_SM00249	-	no_errors	
RICTOR	253260	genome.wustl.edu	37	5	38952359	38952359	+	Silent	SNP	T	T	C	rs111395471	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	38952359	38952359	T	C	SNP	RICTOR	NM_152756	human	genbank	57_37b	-1	validated	silent	c.3066	p.L1022	0.123	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_RasGEF_N	-		
SAMD10	140700	genome.wustl.edu	37	20	62607179	62607179	+	Missense_Mutation	SNP	G	A	A	rs113166910	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62607179	62607179	G	A	SNP	SAMD10	NM_080621	human	genbank	57_37b	-1	validated	missense	c.452	p.A151V	1.000	superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_2	superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_2	-		
SLC12A7	10723	genome.wustl.edu	37	5	1063998	1063998	+	Silent	SNP	G	G	A	rs7722287	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	1063998	1063998	G	A	SNP	SLC12A7	NM_006598	human	genbank	57_37b	-1	validated	silent	c.2700	p.Y900	1.000	NULL	HMMPfam_AA_permease	-		
SOBP	55084	genome.wustl.edu	37	6	107955025	107955025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	107955025	107955025	C	T	SNP	SOBP	NM_018013	human	genbank	57_37b	+1	validated	missense	c.977	p.P326L	1.000	NULL	NULL	-	no_errors	
SPACA1	81833	genome.wustl.edu	37	6	88769255	88769255	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	88769255	88769255	G	T	SNP	SPACA1	NM_030960	human	genbank	57_37b	+1	reviewed	missense	c.559	p.D187Y	0.764	NULL	NULL	-	no_errors	
TMIGD2	126259	genome.wustl.edu	37	19	4292606	4292606	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4292606	4292606	C	-	DEL	TMIGD2	NM_144615	human	genbank	57_37b	-1	validated	frame_shift_del	c.839	p.G280fs	0.002	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409	(deletion:cds_exon[4292596,4292882])	no_errors	
TTN	7273	genome.wustl.edu	37	2	179499272	179499272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179499272	179499272	C	T	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.34532	p.R11511Q	1.000	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
VANGL1	81839	genome.wustl.edu	37	1	116226619	116226619	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	116226619	116226619	G	A	SNP	VANGL1	NM_138959	human	genbank	57_37b	+1	reviewed	missense	c.1001	p.R334Q	0.848	HMMPfam_Strabismus	HMMPfam_Strabismus	-	no_errors	
WBSCR22	114049	genome.wustl.edu	37	7	73107983	73107983	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	73107983	73107983	C	T	SNP	WBSCR22	NM_017528	human	genbank	57_37b	+1	reviewed	missense	c.626	p.S209L	0.768	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11	-	no_errors	
ZCCHC5	203430	genome.wustl.edu	37	X	77913883	77913883	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	77913883	77913883	A	C	SNP	ZCCHC5	NM_152694	human	genbank	57_37b	-1	reviewed	missense	c.35	p.L12R	0.999	NULL	HMMPfam_zf-CCHC,HMMSmart_ZnF_C2HC	-	no_errors	
ZIC4	84107	genome.wustl.edu	37	3	147108756	147108756	+	Silent	SNP	C	T	T	rs17509456	byCluster;byFrequency	TCGA-BH-A0HL-01	TCGA-BH-A0HL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	147108756	147108756	C	T	SNP	ZIC4	ENST00000383075	human	ensembl	57_37b	-1	known	silent	c.966	p.S322	0.881	NULL	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-		
