Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AASS	10157	genome.wustl.edu	37	7	121741712	121741712	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	121741712	121741712	G	A	SNP	AASS	NM_005763	human	genbank	57_37b	-1	reviewed	missense	c.1301	p.P434L	1.000	NULL	superfamily_Formate/glycerate dehydrogenase catalytic domain-like,HMMPfam_AlaDh_PNT_N,HMMPfam_AlaDh_PNT_C,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Saccharop_dh,superfamily_Glyceraldehyde-3-phosphate dehydrogenase-like C-terminal domain	-	no_errors	
ACIN1	22985	genome.wustl.edu	37	14	23530619	23530619	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23530619	23530619	C	T	SNP	ACIN1	NM_014977	human	genbank	57_37b	-1	validated	silent	c.3486	p.E1162	1.000	NULL	superfamily_SAP domain,HMMPfam_SAP,HMMSmart_SM00513,superfamily_RNA-binding domain RBD	-	no_errors	
AHSA1	10598	genome.wustl.edu	37	14	77935581	77935581	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	77935581	77935581	C	T	SNP	AHSA1	NM_012111	human	genbank	57_37b	+1	validated	missense	c.1006	p.R336C	1.000	NULL	superfamily_Activator of Hsp90 ATPase Aha1,HMMPfam_Aha1_N,superfamily_Bet v1-like,HMMPfam_AHSA1	-	no_errors	
C17orf28	283987	genome.wustl.edu	37	17	72952020	72952020	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72952020	72952020	C	T	SNP	C17orf28	NM_030630	human	genbank	57_37b	-1	validated	silent	c.1503	p.V501	1.000	HMMPfam_Hid1	HMMPfam_Hid1	-	no_errors	
C17orf74	201243	genome.wustl.edu	37	17	7329370	7329370	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7329370	7329370	G	C	SNP	C17orf74	NM_175734	human	genbank	57_37b	+1	validated	splice_site	c.196+1	e2+1	0.927	-	-	-	no_errors	
C3orf22	152065	genome.wustl.edu	37	3	126268811	126268811	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	126268811	126268811	C	T	SNP	C3orf22	NM_152533	human	genbank	57_37b	-1	predicted	missense	c.326	p.R109H	0.021	NULL	NULL	-	no_errors	
C4orf43	55319	genome.wustl.edu	37	4	164428259	164428259	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	164428259	164428259	A	T	SNP	C4orf43	NM_018352	human	genbank	57_37b	+1	validated	missense	c.78	p.Q26H	0.997	NULL	NULL	-	no_errors	
C9orf102	56959	genome.wustl.edu	37	9	98638288	98638288	+	Missense_Mutation	SNP	A	A	G	rs690528	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	98638288	98638288	A	G	SNP	C9orf102	NM_001010895	human	genbank	57_37b	+1	validated	missense	c.1	p.M1V	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-		
C9orf125	84302	genome.wustl.edu	37	9	104238875	104238875	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	104238875	104238875	C	T	SNP	C9orf125	NM_032342	human	genbank	57_37b	-1	provisional	missense	c.500	p.R167H	1.000	NULL	NULL	-	no_errors	
CCDC88B	283234	genome.wustl.edu	37	11	64110683	64110683	+	Missense_Mutation	SNP	G	G	C	rs479552	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64110683	64110683	G	C	SNP	CCDC88B	ENST00000394494	human	ensembl	57_37b	+1	known	missense	c.37	p.V13L	0.994	NULL	NULL	-		
CNGA3	1261	genome.wustl.edu	37	2	99013403	99013403	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	99013403	99013403	G	T	SNP	CNGA3	NM_001298	human	genbank	57_37b	+1	reviewed	missense	c.1770	p.E590D	0.713	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2	-	no_errors	
CTNNA3	29119	genome.wustl.edu	37	10	68940116	68940116	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	68940116	68940116	G	A	SNP	CTNNA3	NM_001127384	human	genbank	57_37b	-1	validated	missense	c.1006	p.R336C	1.000	HMMPfam_Vinculin	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	-	no_errors	
CYB5R4	51167	genome.wustl.edu	37	6	84644368	84644368	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	84644368	84644368	C	T	SNP	CYB5R4	NM_016230	human	genbank	57_37b	+1	validated	missense	c.869	p.T290M	0.998	superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_6	superfamily_Cyt_B5,HMMPfam_Cyt-b5,PatternScan_CYTOCHROME_B5_1,superfamily_HSP20_chap,HMMPfam_CS,superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_6,superfamily_SSF52343,HMMPfam_NAD_binding_1	-	no_errors	
CYP2S1	29785	genome.wustl.edu	37	19	41711922	41711922	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41711922	41711922	C	A	SNP	CYP2S1	NM_030622	human	genbank	57_37b	+1	reviewed	missense	c.1224	p.H408Q	0.012	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors	
DEFB129	140881	genome.wustl.edu	37	20	210400	210402	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	210400	210402	AGA	-	DEL	DEFB129	NM_080831	human	genbank	57_37b	+1	validated	in_frame_del	c.540_542	p.E182in_frame_del	0.002:0.000:0.000	NULL	NULL	(deletion:cds_exon[209919,210412])	no_errors	
DUSP10	11221	genome.wustl.edu	37	1	221912365	221912365	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	221912365	221912365	T	C	SNP	DUSP10	NM_007207	human	genbank	57_37b	-1	reviewed	missense	c.722	p.N241S	1.000	superfamily_Rhodanese/Cell cycle control phosphatase,HMMSmart_SM00450,HMMPfam_Rhodanese	superfamily_Rhodanese/Cell cycle control phosphatase,HMMSmart_SM00450,HMMPfam_Rhodanese,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
EMR2	30817	genome.wustl.edu	37	19	14863285	14863285	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14863285	14863285	C	T	SNP	EMR2	ENST00000360222	human	ensembl	57_37b	-1	known	missense	c.1246	p.A416T	0.997	NULL	PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,superfamily_SSF57196,PatternScan_ASX_HYDROXYL	-	no_errors	
ENSG00000202217	0	genome.wustl.edu	37	9	77415000	77415000	+	RNA	SNP	T	T	C	rs12336062	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	77415000	77415000	T	C	SNP	ENSG00000202217	ENST00000365347	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.001	-	-	-		
FAM20A	54757	genome.wustl.edu	37	17	66596769	66596769	+	Silent	SNP	C	C	T	rs2907388	byCluster;by1000genomes	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	66596769	66596769	C	T	SNP	FAM20A	NM_017565	human	genbank	57_37b	-1	validated	silent	c.39	p.L13	1.000	NULL	HMMPfam_DUF1193	-		
FOXN3	1112	genome.wustl.edu	37	14	89878525	89878525	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	89878525	89878525	G	A	SNP	FOXN3	NM_001085471	human	genbank	57_37b	-1	reviewed	missense	c.296	p.A99V	1.000	NULL	"HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,PatternScan_FORK_HEAD_1,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors	
GATA3	2625	genome.wustl.edu	37	10	8115952	8115953	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8115952	8115953	-	C	INS	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.1301_1302	p.H435fs	1.000:0.946	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors	
HCFC1	3054	genome.wustl.edu	37	X	153215007	153215007	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153215007	153215007	T	C	SNP	HCFC1	NM_005334	human	genbank	57_37b	-1	reviewed	missense	c.6065	p.E2022G	1.000	NULL	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMPfam_Kelch_2,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
IL20RB	53833	genome.wustl.edu	37	3	136699172	136699172	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	136699172	136699172	G	A	SNP	IL20RB	ENST00000491483	human	ensembl	57_37b	+1	known	splice_site	c.107-1	e2-1	0.001	-	-	-	no_errors	
IL32	9235	genome.wustl.edu	37	16	3119287	3119287	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3119287	3119287	C	T	SNP	IL32	NM_001012631	human	genbank	57_37b	+1	reviewed	silent	c.498	p.Y166	0.000	NULL	NULL	-	no_errors	
KIAA1024	23251	genome.wustl.edu	37	15	79749073	79749073	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	79749073	79749073	T	C	SNP	KIAA1024	NM_015206	human	genbank	57_37b	+1	validated	missense	c.584	p.L195S	1.000	NULL	HMMPfam_UPF0258	-	no_errors	
KIF19	124602	genome.wustl.edu	37	17	72350926	72350926	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72350926	72350926	C	T	SNP	KIF19	NM_153209	human	genbank	57_37b	+1	validated	silent	c.2712	p.S904	0.054	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KLK4	9622	genome.wustl.edu	37	19	51410279	51410279	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51410279	51410279	C	A	SNP	KLK4	NM_004917	human	genbank	57_37b	-1	reviewed	missense	c.676	p.A226S	0.000	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
LMTK2	22853	genome.wustl.edu	37	7	97823713	97823713	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	97823713	97823713	C	T	SNP	LMTK2	NM_014916	human	genbank	57_37b	+1	reviewed	silent	c.3936	p.D1312	0.373	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
LOC400940	0	genome.wustl.edu	37	2	6127209	6127209	+	RNA	SNP	T	T	C	rs2709455	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	6127209	6127209	T	C	SNP	LOC400940	NR_026833	human	genbank	57_37b	+1	predicted	rna	NULL	NULL	0.000	-	-	-		
LOC643810	643810	genome.wustl.edu	37	11	5543803	5543803	+	Splice_Site	SNP	T	C	C	rs7945471	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5543803	5543803	T	C	SNP	LOC643810	XR_078436	human	genbank	57_37b	-1	model	splice_site	c.NULL	NULL	0.000	-	-	-		
LOC727924	727924	genome.wustl.edu	37	15	22332544	22332544	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	22332544	22332544	G	A	SNP	LOC727924	NR_015416	human	genbank	57_37b	+1	predicted	rna	NULL	NULL	0.546	-	-	-	no_errors	
MRPL38	64978	genome.wustl.edu	37	17	73898161	73898161	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73898161	73898161	G	C	SNP	MRPL38	NM_032478	human	genbank	57_37b	-1	reviewed	missense	c.322	p.Q108E	0.029	NULL	superfamily_PEBP,HMMPfam_PBP	-	no_errors	
MS4A4A	51338	genome.wustl.edu	37	11	60064763	60064763	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	60064763	60064763	G	A	SNP	MS4A4A	NM_148975	human	genbank	57_37b	+1	reviewed	missense	c.295	p.V99M	0.000	HMMPfam_CD20	HMMPfam_CD20	-	no_errors	
MTERFD3	80298	genome.wustl.edu	37	12	107371529	107371529	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	107371529	107371529	C	T	SNP	MTERFD3	NM_001033050	human	genbank	57_37b	-1	validated	missense	c.964	p.V322I	1.000	HMMPfam_mTERF	HMMPfam_mTERF,HMMSmart_Mterf	-	no_errors	
NCKAP5	344148	genome.wustl.edu	37	2	133539971	133539971	+	Silent	SNP	T	T	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	133539971	133539971	T	C	SNP	NCKAP5	NM_207363	human	genbank	57_37b	-1	validated	silent	c.4413	p.T1471	0.969	NULL	NULL	-	no_errors	
OR7A5	26659	genome.wustl.edu	37	19	14938267	14938267	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14938267	14938267	C	A	SNP	OR7A5	NM_017506	human	genbank	57_37b	-1	validated	missense	c.787	p.A263S	0.020	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OXA1L	5018	genome.wustl.edu	37	14	23239475	23239475	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23239475	23239475	C	G	SNP	OXA1L	NM_005015	human	genbank	57_37b	+1	validated	silent	c.837	p.L279	0.951	HMMPfam_60KD_IMP	HMMPfam_60KD_IMP	-	no_errors	
PITPNM1	9600	genome.wustl.edu	37	11	67261512	67261512	+	Silent	SNP	C	C	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67261512	67261512	C	A	SNP	PITPNM1	NM_004910	human	genbank	57_37b	-1	validated	silent	c.2889	p.L963	0.996	NULL	HMMPfam_IP_trans,superfamily_Bet v1-like,HMMPfam_DDHD,superfamily_HAD-like,HMMPfam_LNS2,HMMSmart_SM00775	-	no_errors	
POTEA	340441	genome.wustl.edu	37	8	43152259	43152259	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	43152259	43152259	G	T	SNP	POTEA	NM_001005365	human	genbank	57_37b	+1	provisional	missense	c.396	p.K132N	0.996	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
RAPGEF4	11069	genome.wustl.edu	37	2	173825508	173825508	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	173825508	173825508	C	T	SNP	RAPGEF4	NM_007023	human	genbank	57_37b	+1	validated	silent	c.558	p.H186	1.000	NULL	"superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMPfam_RA,HMMSmart_SM00147,HMMPfam_RasGEF,PatternScan_RASGEF"	-	no_errors	
RBM19	9904	genome.wustl.edu	37	12	114296632	114296632	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	114296632	114296632	G	T	SNP	RBM19	NM_016196	human	genbank	57_37b	-1	reviewed	missense	c.2628	p.F876L	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1,HMMSmart_SM00361	-	no_errors	
SERPINE1	5054	genome.wustl.edu	37	7	100777176	100777176	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100777176	100777176	T	C	SNP	SERPINE1	NM_000602	human	genbank	57_37b	+1	reviewed	splice_site	c.899+2	e4+2	1.000	-	-	-	no_errors	
TCF7L2	6934	genome.wustl.edu	37	10	114910812	114910812	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	114910812	114910812	C	T	SNP	TCF7L2	NM_030756	human	genbank	57_37b	+1	reviewed	missense	c.862	p.H288Y	1.000	NULL	HMMPfam_CTNNB1_binding,superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box	-	no_errors	
TECPR2	9895	genome.wustl.edu	37	14	102965368	102965372	+	Frame_Shift_Del	DEL	CACCA	CACCA	-	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	CACCA	CACCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	102965368	102965372	CACCA	-	DEL	TECPR2	ENST00000380088	human	ensembl	57_37b	+1	known	frame_shift_del	c.2005_2009	p.T672fs	0.001:0.000:0.001:0.000:0.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMSmart_SM00706	(deletion:cds_exon[102965194,102965565])	no_errors	
TMEM59	9528	genome.wustl.edu	37	1	54509100	54509100	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	54509100	54509100	G	C	SNP	TMEM59	NM_004872	human	genbank	57_37b	-1	provisional	silent	c.489	p.T163	1.000	NULL	NULL	-	no_errors	
VPS33B	26276	genome.wustl.edu	37	15	91551102	91551102	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	91551102	91551102	G	C	SNP	VPS33B	NM_018668	human	genbank	57_37b	-1	reviewed	missense	c.496	p.L166V	1.000	superfamily_Sec1/munc18-like (SM) proteins,HMMPfam_Sec1	superfamily_Sec1/munc18-like (SM) proteins,HMMPfam_Sec1	-	no_errors	
XPO6	23214	genome.wustl.edu	37	16	28167638	28167638	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28167638	28167638	C	T	SNP	XPO6	NM_015171	human	genbank	57_37b	-1	provisional	missense	c.854	p.R285Q	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_IBN_N,HMMPfam_Xpo1	-	no_errors	
ZNF434	54925	genome.wustl.edu	37	16	3447534	3447534	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A1HI-01	TCGA-C8-A1HI-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3447534	3447534	G	A	SNP	ZNF434	ENST00000396852	human	ensembl	57_37b	-1	known	silent	c.24	p.T8	0.003	NULL	HMMPfam_SCAN,HMMSmart_SCAN,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
