Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCC1	4363	genome.wustl.edu	37	16	16219730	16219730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	16219730	16219730	G	A	SNP	ABCC1	NM_004996	human	genbank	57_37b	+1	reviewed	missense	c.3781	p.V1261M	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_PROTEIN_KINASE_ATP,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACAD10	80724	genome.wustl.edu	37	12	112153693	112153693	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	112153693	112153693	C	T	SNP	ACAD10	NM_001136538	human	genbank	57_37b	+1	reviewed	missense	c.1012	p.R338C	0.026	superfamily_Protein kinase-like (PK-like),HMMPfam_APH	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Protein kinase-like (PK-like),HMMPfam_APH,PatternScan_PROTEIN_KINASE_TYR,superfamily_Acyl-CoA dehydrogenase NM domain-like,HMMPfam_Acyl-CoA_dh_N,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like,PatternScan_THIOL_PROTEASE_HIS	-	no_errors	
APOB48R	55911	genome.wustl.edu	37	16	28506761	28506761	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28506761	28506761	C	G	SNP	APOB48R	NM_018690	human	genbank	57_37b	+1	reviewed	missense	c.399	p.S133R	0.010	NULL	NULL	-	no_errors	
AQP7	364	genome.wustl.edu	37	9	33385815	33385815	+	Missense_Mutation	SNP	T	T	C	rs62542745	byCluster	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	33385815	33385815	T	C	SNP	AQP7	NM_001170	human	genbank	57_37b	-1	reviewed	missense	c.575	p.Q192R	0.034	HMMPfam_MIP,superfamily_MIP	PatternScan_MIP,HMMPfam_MIP,superfamily_MIP	-		
ATXN1L	342371	genome.wustl.edu	37	16	71884325	71884325	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71884325	71884325	C	G	SNP	ATXN1L	NM_001137675	human	genbank	57_37b	+1	validated	missense	c.682	p.P228A	1.000	NULL	superfamily_Ataxin-1_HBP1,HMMPfam_AXH	-	no_errors	
C2orf16	84226	genome.wustl.edu	37	2	27801199	27801201	+	In_Frame_Del	DEL	TTG	TTG	-	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	TTG	TTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27801199	27801201	TTG	-	DEL	C2orf16	NM_032266	human	genbank	57_37b	+1	validated	in_frame_del	c.1760_1762	p.V588in_frame_del	0.002:0.002:0.072	NULL	NULL	(deletion:cds_exon[27799440,27805394])	no_errors	
COG6	57511	genome.wustl.edu	37	13	40253739	40253739	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	40253739	40253739	C	G	SNP	COG6	NM_020751	human	genbank	57_37b	+1	reviewed	missense	c.605	p.T202R	1.000	HMMPfam_COG6	HMMPfam_COG6	-	no_errors	
COL18A1	80781	genome.wustl.edu	37	21	46911228	46911228	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46911228	46911228	C	T	SNP	COL18A1	NM_130444	human	genbank	57_37b	+1	reviewed	silent	c.3402	p.D1134	0.261	NULL	HMMPfam_DUF959,HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_C-type lectin-like,HMMPfam_Endostatin	-	no_errors	
COL25A1	84570	genome.wustl.edu	37	4	110221778	110221778	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	110221778	110221778	T	G	SNP	COL25A1	NM_198721	human	genbank	57_37b	-1	validated	missense	c.328	p.I110L	0.985	NULL	HMMPfam_Collagen	-	no_errors	
DAK	26007	genome.wustl.edu	37	11	61112999	61112999	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61112999	61112999	G	C	SNP	DAK	NM_015533	human	genbank	57_37b	+1	reviewed	missense	c.1413	p.W471C	1.000	superfamily_Citrobacter dihydroxyacetone kinase extra ATP-binding domain,HMMPfam_Dak2	superfamily_DAK1/DegV-like,HMMPfam_Dak1,superfamily_Citrobacter dihydroxyacetone kinase extra ATP-binding domain,HMMPfam_Dak2	-	no_errors	
DDX39	10212	genome.wustl.edu	37	19	14523994	14523994	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14523994	14523994	G	T	SNP	DDX39	NM_005804	human	genbank	57_37b	-1	reviewed	nonsense	c.39	p.Y13*	0.247	NULL	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,HMMSmart_HELICc,HMMPfam_Helicase_C	-	no_errors	
DOCK5	80005	genome.wustl.edu	37	8	25159972	25159972	+	Splice_Site	SNP	T	T	G	rs77327996	byCluster;byFrequency;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	25159972	25159972	T	G	SNP	DOCK5	NM_024940	human	genbank	57_37b	+1	validated	splice_site	c.976+2	e10+2	1.000	-	-	-		
EIF3F	8665	genome.wustl.edu	37	11	8016560	8016560	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	8016560	8016560	C	T	SNP	EIF3F	NM_003754	human	genbank	57_37b	+1	validated	silent	c.777	p.P259	1.000	NULL	HMMPfam_Mov34,HMMSmart_JAB_MPN	-	no_errors	
ENSG00000205333	0	genome.wustl.edu	37	15	79027814	79027814	+	Missense_Mutation	SNP	G	G	T	rs11072799	byCluster;byHapMap;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	79027814	79027814	G	T	SNP	ENSG00000205333	ENST00000379674	human	ensembl	57_37b	+1	known	missense	c.351	p.E117D	0.606	NULL	NULL	-		
ENSG00000221247	0	genome.wustl.edu	37	15	84949951	84949951	+	RNA	SNP	C	C	G	rs62029581	byCluster;byFrequency	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	84949951	84949951	C	G	SNP	ENSG00000221247	ENST00000408320	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.877	-	-	-		
ENSG00000224113	0	genome.wustl.edu	37	17	33332655	33332655	+	Missense_Mutation	SNP	A	A	G	rs60014690	byCluster;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33332655	33332655	A	G	SNP	ENSG00000224113	ENST00000415412	human	ensembl	57_37b	+1	known	missense	c.377	p.N126S	0.999	HMMPfam_DUF2055	HMMPfam_DUF2055	-		
ENSG00000227561	0	genome.wustl.edu	37	17	44360744	44360744	+	Missense_Mutation	SNP	T	T	C	rs117525268	by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	44360744	44360744	T	C	SNP	ENSG00000227561	ENST00000451529	human	ensembl	57_37b	-1	known	missense	c.389	p.Q130R	1.000	superfamily_Bromodomain,HMMPfam_Bromodomain	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,superfamily_Bromodomain,HMMPfam_Bromodomain	-		
ENSG00000245496	0	genome.wustl.edu	37	10	27540461	27540461	+	RNA	SNP	C	C	T	rs11015625	byCluster;byFrequency;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	27540461	27540461	C	T	SNP	ENSG00000245496	ENST00000501900	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.001	-	-	-		
ENSG00000245852	0	genome.wustl.edu	37	6	53134301	53134301	+	RNA	SNP	A	A	G	rs8714	byCluster;by2Hit2Allele;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	53134301	53134301	A	G	SNP	ENSG00000245852	ENST00000500681	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-		
ESPL1	9700	genome.wustl.edu	37	12	53680055	53680055	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53680055	53680055	C	G	SNP	ESPL1	NM_012291	human	genbank	57_37b	+1	validated	missense	c.3535	p.Q1179E	1.000	NULL	HMMPfam_Peptidase_C50	-	no_errors	
ESRRG	2104	genome.wustl.edu	37	1	216896587	216896587	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	216896587	216896587	C	G	SNP	ESRRG	NM_001438	human	genbank	57_37b	-1	validated	missense	c.55	p.E19Q	1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00399,HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
FAM118B	79607	genome.wustl.edu	37	11	126110852	126110852	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	126110852	126110852	T	G	SNP	FAM118B	NM_024556	human	genbank	57_37b	+1	validated	missense	c.252	p.D84E	1.000	NULL	NULL	-	no_errors	
FAM48B2	646212	genome.wustl.edu	37	X	24331338	24331338	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	24331338	24331338	G	A	SNP	FAM48B2	NM_001136233	human	genbank	57_37b	-1	inferred	missense	c.95	p.A32V	0.000	NULL	NULL	-	no_errors	
FAM96B	51647	genome.wustl.edu	37	16	66966114	66966114	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	66966114	66966114	G	A	SNP	FAM96B	NM_016062	human	genbank	57_37b	-1	validated	missense	c.484	p.R162C	0.980	NULL	HMMPfam_DUF59	-	no_errors	
FBN1	2200	genome.wustl.edu	37	15	48780678	48780678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48780678	48780678	C	T	SNP	FBN1	NM_000138	human	genbank	57_37b	-1	reviewed	missense	c.3095	p.C1032Y	1.000	superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181	HMMSmart_SM00181,HMMPfam_EGF,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Concanavalin A-like lectins/glucanases,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Growth factor receptor domain	-	no_errors	
FERD3L	222894	genome.wustl.edu	37	7	19184661	19184661	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	19184661	19184661	G	A	SNP	FERD3L	NM_152898	human	genbank	57_37b	-1	validated	missense	c.325	p.R109C	1.000	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors	
FSIP2	285135	genome.wustl.edu	37	2	186671458	186671459	+	In_Frame_Ins	INS	-	-	AAGATA	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	186671458	186671459	-	AAGATA	INS	FSIP2	ENST00000424728	human	ensembl	57_37b	+1	known	in_frame_ins	c.17425_17426	p.5811in_frame_insKD	0.000:0.000	NULL	NULL	-	no_errors	
FYCO1	79443	genome.wustl.edu	37	3	46026346	46026347	+	Splice_Site	INS	-	-	CC	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	46026346	46026347	-	CC	INS	FYCO1	NM_024513	human	genbank	57_37b	-1	validated	splice_site_ins	c.55+1_55+1	e1+1	0.998:1.000	-	-	-	no_errors	
GRIN2B	2904	genome.wustl.edu	37	12	13716276	13716276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	13716276	13716276	C	T	SNP	GRIN2B	NM_000834	human	genbank	57_37b	-1	reviewed	missense	c.3896	p.R1299H	1.000	HMMPfam_NMDAR2_C	superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	-	no_errors	
GUCY2C	2984	genome.wustl.edu	37	12	14804406	14804406	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	14804406	14804406	C	A	SNP	GUCY2C	NM_004963	human	genbank	57_37b	-1	validated	missense	c.1645	p.G549C	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors	
INSR	3643	genome.wustl.edu	37	19	7267521	7267521	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7267521	7267521	T	C	SNP	INSR	NM_000208	human	genbank	57_37b	-1	reviewed	missense	c.487	p.I163V	0.997	superfamily_L domain-like,HMMPfam_Recep_L_domain	superfamily_L domain-like,HMMPfam_Recep_L_domain,HMMPfam_Furin-like,superfamily_Growth factor receptor domain,HMMSmart_SM00261,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors	
KIAA0141	9812	genome.wustl.edu	37	5	141307719	141307725	+	Frame_Shift_Del	DEL	ACTCTGG	ACTCTGG	-	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	ACTCTGG	ACTCTGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	141307719	141307725	ACTCTGG	-	DEL	KIAA0141	NM_001142603	human	genbank	57_37b	+1	validated	frame_shift_del	c.268_274	p.T90fs	0.983:0.979:0.661:0.941:0.987:0.986:0.865	NULL	superfamily_SSF81901,HMMSmart_SEL1,HMMPfam_Sel1	(deletion:cds_exon[141307716,141307863])	no_errors	
KIAA0195	9772	genome.wustl.edu	37	17	73486391	73486391	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73486391	73486391	G	T	SNP	KIAA0195	NM_014738	human	genbank	57_37b	+1	validated	missense	c.1031	p.R344L	0.997	NULL	superfamily_Calcium ATPase transmembrane domain M	-	no_errors	
KIAA0467	23334	genome.wustl.edu	37	1	43892390	43892390	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	43892390	43892390	C	T	SNP	KIAA0467	NM_015284	human	genbank	57_37b	+1	predicted	silent	c.522	p.A174	0.991	NULL	NULL	-	no_errors	
KRT17	3872	genome.wustl.edu	37	17	39780482	39780482	+	Missense_Mutation	SNP	G	G	A	rs58730926	byCluster	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39780482	39780482	G	A	SNP	KRT17	NM_000422	human	genbank	57_37b	-1	reviewed	missense	c.280	p.R94C	1.000	HMMPfam_Filament	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-		
LAMA2	3908	genome.wustl.edu	37	6	129807718	129807718	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	129807718	129807718	C	A	SNP	LAMA2	NM_000426	human	genbank	57_37b	+1	reviewed	missense	c.7849	p.L2617M	0.348	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_1	HMMSmart_LamNT,HMMPfam_Laminin_N,superfamily_Gal_bind_like,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,PatternScan_EGF_LAM_1,superfamily_SSF57196,PatternScan_EGF_2,HMMSmart_LamB,HMMPfam_Laminin_B,HMMPfam_Laminin_I,superfamily_SSF56399,HMMPfam_Laminin_II,HMMSmart_LamG,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors	
LDLRAD3	143458	genome.wustl.edu	37	11	36119907	36119907	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	36119907	36119907	G	A	SNP	LDLRAD3	NM_174902	human	genbank	57_37b	+1	provisional	missense	c.350	p.R117H	1.000	HMMPfam_Ldl_recept_a,superfamily_LDL_rcpt_classA_cys-rich,HMMSmart_LDLa	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1	-	no_errors	
LOC442155	442155	genome.wustl.edu	37	6	5066039	5066039	+	RNA	SNP	A	A	T	rs9405255	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	5066039	5066039	A	T	SNP	LOC442155	XR_078334	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.003	-	-	-		
LOC647288	647288	genome.wustl.edu	37	13	75814070	75814070	+	RNA	SNP	C	C	G	rs61960513	byCluster	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	75814070	75814070	C	G	SNP	LOC647288	XR_079506	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.034	-	-	-		
LOC729454	729454	genome.wustl.edu	37	3	39255730	39255730	+	Missense_Mutation	SNP	G	A	A	rs7643880	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	39255730	39255730	G	A	SNP	LOC729454	XM_001130287	human	genbank	57_37b	+1	model	missense	c.326	p.C109Y	0.999	superfamily_Actin depolymerizing proteins	superfamily_Actin depolymerizing proteins,HMMSmart_SM00102,HMMPfam_Cofilin_ADF	-		
LRP1	4035	genome.wustl.edu	37	12	57569343	57569343	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57569343	57569343	C	G	SNP	LRP1	NM_002332	human	genbank	57_37b	+1	reviewed	silent	c.3648	p.P1216	0.001	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_1	-	no_errors	
LRP1	4035	genome.wustl.edu	37	12	57587027	57587027	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57587027	57587027	C	G	SNP	LRP1	NM_002332	human	genbank	57_37b	+1	reviewed	missense	c.7624	p.L2542V	1.000	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,superfamily_YWTD domain	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors	
LUZP1	7798	genome.wustl.edu	37	1	23419915	23419915	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	23419915	23419915	G	C	SNP	LUZP1	NM_001142546	human	genbank	57_37b	-1	reviewed	missense	c.840	p.N280K	1.000	NULL	HMMPfam_CortBP2	-	no_errors	
MAP3K13	9175	genome.wustl.edu	37	3	185191457	185191457	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	185191457	185191457	G	T	SNP	MAP3K13	NM_004721	human	genbank	57_37b	+1	reviewed	nonsense	c.2338	p.E780*	0.021	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MLL2	8085	genome.wustl.edu	37	12	49418417	49418417	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49418417	49418417	C	A	SNP	MLL2	NM_003482	human	genbank	57_37b	-1	validated	missense	c.15996	p.M5332I	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMSmart_SM00184,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_RECOMBINASES_2,HMMSmart_SM00398,superfamily_HMG-box,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MUC1	4582	genome.wustl.edu	37	1	155160204	155160204	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155160204	155160204	C	A	SNP	MUC1	NM_002456	human	genbank	57_37b	-1	reviewed	missense	c.469	p.V157F	0.000	superfamily_SSF82671,HMMSmart_SEA,HMMPfam_SEA	superfamily_SSF82671,HMMSmart_SEA,HMMPfam_SEA	-	no_errors	
MYH11	4629	genome.wustl.edu	37	16	15931822	15931822	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15931822	15931822	G	T	SNP	MYH11	NM_001040114	human	genbank	57_37b	-1	reviewed	silent	c.288	p.L96	1.000	superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
NKAIN2	154215	genome.wustl.edu	37	6	124979382	124979382	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	124979382	124979382	G	T	SNP	NKAIN2	NM_001040214	human	genbank	57_37b	+1	validated	missense	c.324	p.W108C	1.000	HMMPfam_NKAIN	HMMPfam_NKAIN	-	no_errors	
NLRP7	199713	genome.wustl.edu	37	19	55447631	55447631	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55447631	55447631	C	G	SNP	NLRP7	NM_001127255	human	genbank	57_37b	-1	reviewed	silent	c.2298	p.L766	0.072	superfamily_RNI-like	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	-	no_errors	
ODZ2	57451	genome.wustl.edu	37	5	167674943	167674943	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	167674943	167674943	C	A	SNP	ODZ2	NM_001122679	human	genbank	57_37b	+1	inferred	silent	c.6972	p.T2324	0.953	NULL	HMMPfam_Ten_N,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Carboxypeptidase regulatory domain,superfamily_NHL repeat,HMMPfam_NHL,HMMPfam_RHS_repeat	-	no_errors	
OR51A7	119687	genome.wustl.edu	37	11	4928748	4928748	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4928748	4928748	A	T	SNP	OR51A7	NM_001004749	human	genbank	57_37b	+1	provisional	missense	c.149	p.K50M	0.005	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR52E6	390078	genome.wustl.edu	37	11	5863113	5863113	+	Silent	SNP	G	G	A	rs10742810	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5863113	5863113	G	A	SNP	OR52E6	NM_001005167	human	genbank	57_37b	-1	provisional	silent	c.15	p.N5	0.002	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
OSMR	9180	genome.wustl.edu	37	5	38918971	38918971	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	38918971	38918971	G	C	SNP	OSMR	NM_003999	human	genbank	57_37b	+1	reviewed	missense	c.1392	p.K464N	0.913	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_L_F2	-	no_errors	
PCDHB8	56128	genome.wustl.edu	37	5	140559596	140559596	+	Missense_Mutation	SNP	T	T	G	rs2697541	byCluster;byFrequency	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140559596	140559596	T	G	SNP	PCDHB8	NM_019120	human	genbank	57_37b	+1	reviewed	missense	c.1981	p.L661V	0.998	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-		
PHF20L1	51105	genome.wustl.edu	37	8	133849997	133849997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	133849997	133849997	G	A	SNP	PHF20L1	NM_016018	human	genbank	57_37b	+1	validated	missense	c.2132	p.G711E	1.000	superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,PatternScan_ZF_PHD_1	superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333,HMMSmart_SM00743,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors	
PHLPP2	23035	genome.wustl.edu	37	16	71683709	71683709	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71683709	71683709	C	T	SNP	PHLPP2	NM_015020	human	genbank	57_37b	-1	validated	missense	c.3056	p.S1019N	1.000	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C	superfamily_PH domain-like,superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C	-	no_errors	
PIPOX	51268	genome.wustl.edu	37	17	27380441	27380441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27380441	27380441	G	A	SNP	PIPOX	NM_016518	human	genbank	57_37b	+1	validated	missense	c.488	p.R163Q	0.866	superfamily_FAD/NAD(P)-binding domain,HMMPfam_DAO	superfamily_FAD/NAD(P)-binding domain,HMMPfam_DAO,superfamily_FAD-linked reductases C-terminal domain	-	no_errors	
PLIN4	0	genome.wustl.edu	37	19	4508835	4508835	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4508835	4508835	T	A	SNP	PLIN4	NM_001080400	human	genbank	57_37b	-1	provisional	missense	c.3605	p.H1202L	0.761	superfamily_Mannose-6-phosphate receptor binding protein 1 (Tip47) C-terminal domain	superfamily_Mannose-6-phosphate receptor binding protein 1 (Tip47) C-terminal domain	-	no_errors	
PRDM10	56980	genome.wustl.edu	37	11	129827748	129827748	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	129827748	129827748	C	A	SNP	PRDM10	NM_020228	human	genbank	57_37b	-1	reviewed	missense	c.127	p.V43F	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
PSMD9	5715	genome.wustl.edu	37	12	122326782	122326782	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122326782	122326782	G	A	SNP	PSMD9	NM_002813	human	genbank	57_37b	+1	reviewed	missense	c.20	p.R7K	0.000	NULL	superfamily_PDZ domain-like,HMMSmart_SM00228	-	no_errors	
PTEN	5728	genome.wustl.edu	37	10	89717742	89717743	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	89717742	89717743	-	G	INS	PTEN	ENST00000371953	human	ensembl	57_37b	+1	known	frame_shift_ins	c.767_768	p.F257fs	1.000:0.979	HMMPfam_PTEN_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,HMMPfam_DSPc,HMMPfam_PTEN_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors	
RAB17	64284	genome.wustl.edu	37	2	238484088	238484088	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	238484088	238484088	C	T	SNP	RAB17	NM_022449	human	genbank	57_37b	-1	validated	silent	c.471	p.L157	1.000	superfamily_SSF52540,HMMSmart_RAB,HMMPfam_Ras	superfamily_SSF52540,HMMSmart_RAB,HMMPfam_Ras	-	no_errors	
RAPGEF1	2889	genome.wustl.edu	37	9	134503455	134503463	+	In_Frame_Del	DEL	CTCTGTGCG	CTCTGTGCG	-	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	CTCTGTGCG	CTCTGTGCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	134503455	134503463	CTCTGTGCG	-	DEL	RAPGEF1	NM_198679	human	genbank	57_37b	-1	reviewed	in_frame_del	c.1049_1041	p.YAQRRLS347in_frame_del*	1.000:1.000:1.000:1.000:1.000:0.918:0.921:0.572:0.556	NULL	superfamily_Ras_GEF,HMMSmart_RasGEFN,HMMPfam_RasGEF_N,HMMSmart_RasGEF,HMMPfam_RasGEF,PatternScan_RASGEF	(deletion:cds_exon[134503300,134503483])	no_errors	
RICTOR	253260	genome.wustl.edu	37	5	39021230	39021230	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	39021230	39021230	C	T	SNP	RICTOR	NM_152756	human	genbank	57_37b	-1	validated	missense	c.106	p.D36N	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_RasGEF_N	-	no_errors	
ROR1	4919	genome.wustl.edu	37	1	64624796	64624796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	64624796	64624796	C	T	SNP	ROR1	NM_005012	human	genbank	57_37b	+1	validated	missense	c.1307	p.S436L	0.415	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Fz,superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
SENP6	26054	genome.wustl.edu	37	6	76380373	76380373	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	76380373	76380373	C	A	SNP	SENP6	NM_015571	human	genbank	57_37b	+1	validated	silent	c.1329	p.V443	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_Peptidase_C48	-	no_errors	
SFRS17A	8227	genome.wustl.edu	37	X	1712955	1712955	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	1712955	1712955	G	A	SNP	SFRS17A	NM_005088	human	genbank	57_37b	+1	validated	silent	c.600	p.T200	0.988	NULL	NULL	-	no_errors	
SLC22A11	55867	genome.wustl.edu	37	11	64329577	64329577	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64329577	64329577	G	A	SNP	SLC22A11	NM_018484	human	genbank	57_37b	+1	reviewed	missense	c.599	p.R200Q	0.996	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors	
SLC35A1	10559	genome.wustl.edu	37	6	88218170	88218170	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	88218170	88218170	G	C	SNP	SLC35A1	NM_006416	human	genbank	57_37b	+1	reviewed	missense	c.607	p.D203H	1.000	HMMPfam_Nuc_sug_transp	superfamily_SSF103481,HMMPfam_Nuc_sug_transp	-	no_errors	
SLC6A18	348932	genome.wustl.edu	37	5	1239601	1239601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	1239601	1239601	G	A	SNP	SLC6A18	NM_182632	human	genbank	57_37b	+1	validated	missense	c.769	p.A257T	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors	
ST3GAL4	6484	genome.wustl.edu	37	11	126283912	126283912	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	126283912	126283912	G	A	SNP	ST3GAL4	NM_006278	human	genbank	57_37b	+1	provisional	missense	c.960	p.M320I	0.000	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors	
SVIL	6840	genome.wustl.edu	37	10	29775379	29775379	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	29775379	29775379	T	G	SNP	SVIL	NM_021738	human	genbank	57_37b	-1	reviewed	missense	c.4593	p.K1531N	1.000	superfamily_Actin depolymerizing proteins,HMMSmart_SM00262	superfamily_Actin depolymerizing proteins,HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_VHP Villin headpiece domain,HMMPfam_VHP,HMMSmart_SM00153	-	no_errors	
TARBP2	6895	genome.wustl.edu	37	12	53895208	53895208	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53895208	53895208	C	T	SNP	TARBP2	NM_134323	human	genbank	57_37b	+1	reviewed	nonsense	c.16	p.Q6*	1.000	NULL	superfamily_dsRNA-binding domain-like,HMMPfam_dsrm,HMMSmart_SM00358	-	no_errors	
TMBIM4	51643	genome.wustl.edu	37	12	66531907	66531907	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	66531907	66531907	C	T	SNP	TMBIM4	NM_016056	human	genbank	57_37b	-1	validated	missense	c.550	p.A184T	1.000	HMMPfam_UPF0005	HMMPfam_UPF0005	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578508	7578508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578508	7578508	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.422	p.C141Y	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TPH2	121278	genome.wustl.edu	37	12	72338118	72338118	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	72338118	72338118	G	C	SNP	TPH2	NM_173353	human	genbank	57_37b	+1	reviewed	silent	c.300	p.R100	1.000	superfamily_SSF55021,HMMPfam_ACT	superfamily_SSF55021,HMMPfam_ACT,superfamily_Aaa_hydroxylase,HMMPfam_Biopterin_H,PatternScan_BIOPTERIN_HYDROXYL	-	no_errors	
TSKS	60385	genome.wustl.edu	37	19	50245191	50245191	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50245191	50245191	C	T	SNP	TSKS	NM_021733	human	genbank	57_37b	-1	reviewed	missense	c.1448	p.G483D	0.998	NULL	NULL	-	no_errors	
XRCC6BP1	91419	genome.wustl.edu	37	12	58347387	58347387	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	58347387	58347387	A	C	SNP	XRCC6BP1	NM_033276	human	genbank	57_37b	+1	provisional	splice_site	c.454-2	e5-2	1.000	-	-	-	no_errors	
ZCCHC11	23318	genome.wustl.edu	37	1	52991318	52991318	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	52991318	52991318	G	A	SNP	ZCCHC11	NM_001009881	human	genbank	57_37b	-1	validated	missense	c.635	p.S212F	0.975	NULL	PatternScan_ZINC_FINGER_C2H2_1,superfamily_Nucleotidyltransferase,superfamily_PAP/OAS1 substrate-binding domain,HMMPfam_PAP_assoc,superfamily_Retrovirus zinc finger-like domains,HMMPfam_zf-CCHC,HMMSmart_SM00343,HMMPfam_NTP_transf_2	-	no_errors	
ZFR	51663	genome.wustl.edu	37	5	32356003	32356003	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32356003	32356003	G	C	SNP	ZFR	NM_016107	human	genbank	57_37b	-1	validated	missense	c.3088	p.L1030V	1.000	HMMSmart_DZF,HMMPfam_DZF	HMMSmart_ZnF_U1,HMMSmart_ZnF_C2H2,superfamily_SSF57667,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_DZF,HMMPfam_DZF	-	no_errors	
ZNF526	116115	genome.wustl.edu	37	19	42729694	42729694	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42729694	42729694	G	A	SNP	ZNF526	NM_133444	human	genbank	57_37b	+1	provisional	missense	c.1139	p.R380Q	0.990	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZNF551	90233	genome.wustl.edu	37	19	58199532	58199532	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58199532	58199532	T	G	SNP	ZNF551	NM_138347	human	genbank	57_37b	+1	validated	missense	c.1841	p.L614R	0.017	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNRF4	148066	genome.wustl.edu	37	19	5456398	5456398	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A13Z-01	TCGA-D8-A13Z-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5456398	5456398	T	A	SNP	ZNRF4	NM_181710	human	genbank	57_37b	+1	validated	missense	c.896	p.V299D	0.002	NULL	superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_EGF_2	-	no_errors	
