Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	TranscriptID	Exon	ChromChange	AAChange	COSMIC_Codon	COSMIC_Gene	Drug_Target
ATP13A5	344905	hgsc.bcm.edu	36	3	194477279	194477280	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	-	-	-	C	-	-	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_198505	exon29	c.3350_3351insG	p.I1117fs	.	.	.
SLC26A3	1811	hgsc.bcm.edu	36	7	107201792	107201792	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_000111	exon17	c.G1816A	p.E606K	.	.	.
CNTNAP2	26047	hgsc.bcm.edu	36	7	147743547	147743547	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_014141	exon24	c.C3902T	p.A1301V	.	.	.
AUTS2	26053	hgsc.bcm.edu	36	7	69876964	69876964	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_015570	exon12	c.C1845T	p.I615I	.	.	.
DBF4	10926	hgsc.bcm.edu	36	7	87374823	87374823	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_006716	exon12	c.G1434A	p.R478R	.	.	.
PHF20	51230	hgsc.bcm.edu	36	20	33914486	33914486	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_016436	exon6	c.G558T	p.K186N	.	.	.
PHF20	51230	hgsc.bcm.edu	36	20	33914645	33914645	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_016436	exon6	c.G717T	p.K239N	.	.	.
PHF20	51230	hgsc.bcm.edu	36	20	33914652	33914652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_016436	exon6	c.G724A	p.E242K	.	.	.
RHOJ	57381	hgsc.bcm.edu	36	14	62741491	62741491	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_020663	exon1	c.G151A	p.V51M	.	.	.
SPATA7	55812	hgsc.bcm.edu	36	14	87974351	87974351	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_001040428	exon11	c.T1536C	p.D512D	.	.	.
ESRRB	2103	hgsc.bcm.edu	36	14	76027693	76027693	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_004452	exon8	c.G938A	p.R313H	.	.	.
SLC5A4	6527	hgsc.bcm.edu	36	22	30955329	30955329	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_014227	exon11	c.C1132T	p.L378L	.	.	.
RANGAP1	5905	hgsc.bcm.edu	36	22	39977018	39977018	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_002883	exon13	c.A1422G	p.L474L	.	.	.
ACSBG2	81616	hgsc.bcm.edu	36	19	6134157	6134157	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_030924	exon10	c.C1196T	p.A399V	.	.	.
ZNF667	63934	hgsc.bcm.edu	36	19	61644815	61644815	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_022103	exon5	c.G1361A	p.R454H	.	.	.
ANK1	286	hgsc.bcm.edu	36	8	41640365	41640365	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_020475	exon40	c.C5447T	p.T1816M	.	.	.
KCNB2	9312	hgsc.bcm.edu	36	8	74012003	74012003	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_004770	exon3	c.C1859T	p.P620L	.	.	.
KCNA10	3744	hgsc.bcm.edu	36	1	110862068	110862068	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_005549	exon1	c.C865A	p.R289R	.	.	.
ARHGEF2	9181	hgsc.bcm.edu	36	1	154186891	154186891	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001162383	exon21	c.C2710T	p.R904X	.	.	.
ACTN2	88	hgsc.bcm.edu	36	1	234969275	234969275	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_001103	exon10	c.C927T	p.P309P	.	.	.
DIRAS3	9077	hgsc.bcm.edu	36	1	68284941	68284941	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_004675	exon2	c.G628A	p.E210K	.	.	.
TTLL7	79739	hgsc.bcm.edu	36	1	84167494	84167494	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_024686	exon10	c.G1055A	p.R352Q	.	.	.
DCST2	127579	hgsc.bcm.edu	36	1	153269623	153269623	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_144622	exon6	c.G928A	p.E310K	.	.	.
E2F8	79733	hgsc.bcm.edu	36	11	19208761	19208761	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_024680	exon8	c.C1263T	p.T421T	.	.	.
CST6	1474	hgsc.bcm.edu	36	11	65536928	65536928	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001323	exon2	c.G296A	p.R99H	.	.	.
CD83	9308	hgsc.bcm.edu	36	6	14241905	14241905	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_004233	exon4	c.G429A	p.A143A	.	.	.
TAP1	6890	hgsc.bcm.edu	36	6	32928969	32928969	+	Silent	SNP	A	A	G	rs55702652	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_000593	exon1	c.T603C	p.V201V	.	.	.
GPR115	221393	hgsc.bcm.edu	36	6	47788230	47788230	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_153838	exon5	c.T479C	p.I160T	.	.	.
TBX21	30009	hgsc.bcm.edu	36	17	43177603	43177603	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_013351	exon6	c.G1480A	p.E494K	.	.	.
FAM57A	79850	hgsc.bcm.edu	36	17	587939	587939	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_024792	exon3	c.C310T	p.R104C	.	.	.
MAP3K3	4215	hgsc.bcm.edu	36	17	59124778	59124778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_002401	exon16	c.G1790A	p.R597Q	.	.	.
TP53	7157	hgsc.bcm.edu	36	17	7517845	7517845	+	Missense_Mutation	SNP	C	C	T	rs28934576	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001126114	exon8	c.G818A	p.R273H	TP53,central_nervous_system,brain,Substitution - Missense,-1	.	.
CDH3	1001	hgsc.bcm.edu	36	16	67276143	67276143	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001793	exon10	c.G1339A	p.V447I	.	.	.
SETBP1	26040	hgsc.bcm.edu	36	18	40786216	40786216	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_015559	exon4	c.C2913A	p.H971Q	.	.	.
ZCWPW2	152098	hgsc.bcm.edu	36	3	28451712	28451712	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001040432	exon3	c.C440G	p.S147X	.	.	.
DUSP7	1849	hgsc.bcm.edu	36	3	52059920	52059920	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001947	exon3	c.C1211T	p.T404M	.	.	.
POLR3B	55703	hgsc.bcm.edu	36	12	105348349	105348349	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_018082	exon14	c.A1432G	p.M478V	.	.	.
P11	8909	hgsc.bcm.edu	36	12	46397632	46397632	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001172439	exon4	c.C318A	p.C106X	.	.	.
WNK1	65125	hgsc.bcm.edu	36	12	806520	806520	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001184985	exon3	c.C984G	p.C328W	.	.	.
PZP	5858	hgsc.bcm.edu	36	12	9201674	9201674	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_002864	exon27	c.G3325A	p.A1109T	.	.	.
SPRED1	161742	hgsc.bcm.edu	36	15	36428923	36428923	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_152594	exon6	c.T591C	p.F197F	.	.	.
FBN1	2200	hgsc.bcm.edu	36	15	46569536	46569536	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_000138	exon25	c.C2886T	p.Y962Y	.	.	.
C15orf33	196951	hgsc.bcm.edu	36	15	47450801	47450801	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_152647	exon12	c.T1100C	p.L367P	.	.	.
PRPS1	5631	hgsc.bcm.edu	36	X	106769308	106769308	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_002764	exon2	c.C250T	p.R84W	.	.	.
SEPT6	23157	hgsc.bcm.edu	36	X	118655029	118655029	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_145799	exon7	c.C945A	p.S315R	.	.	.
CDR1	1038	hgsc.bcm.edu	36	X	139693570	139693570	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_004065	exon1	c.G628A	p.G210R	.	.	.
RIF1	55183	hgsc.bcm.edu	36	2	152030810	152030810	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001177664	exon30	c.C6530T	p.P2177L	.	.	.
SCN1A	6323	hgsc.bcm.edu	36	2	166567437	166567437	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001165964	exon21	c.C3991A	p.L1331I	.	.	.
ITSN2	50618	hgsc.bcm.edu	36	2	24388716	24388716	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_019595	exon5	c.T221A	p.M74K	.	.	.
CAPG	822	hgsc.bcm.edu	36	2	85476257	85476257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001747	exon9	c.G896A	p.R299Q	.	.	.
ERP44	23071	hgsc.bcm.edu	36	9	101824268	101824268	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_015051	exon5	c.G348A	p.G116G	.	.	.
FAM102A	399665	hgsc.bcm.edu	36	9	129756019	129756019	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001035254	exon2	c.G153T	p.E51D	.	.	.
SPTAN1	6709	hgsc.bcm.edu	36	9	130386542	130386542	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001195532	exon17	c.G2354A	p.R785Q	.	.	.
PHYHD1	254295	hgsc.bcm.edu	36	9	130742499	130742499	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_174933	exon9	c.A466G	p.T156A	.	.	.
KATNAL1	84056	hgsc.bcm.edu	36	13	29703468	29703468	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_032116	exon7	c.C868T	p.R290C	.	.	.
MYST4	23522	hgsc.bcm.edu	36	10	76405329	76405329	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_012330	exon8	c.A1228G	p.T410A	.	.	.
ITIH2	3698	hgsc.bcm.edu	36	10	7813813	7813813	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_002216	exon13	c.C1495T	p.R499W	.	.	.
NOC3L	64318	hgsc.bcm.edu	36	10	96096239	96096239	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_022451	exon11	c.T1322G	p.I441S	.	.	.
APC	324	hgsc.bcm.edu	36	5	112202530	112202530	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001127511	exon14	c.C3286T	p.R1096X	APC,large_intestine,colon,Substitution - Nonsense,0	.	.
APC	324	hgsc.bcm.edu	36	5	112203106	112203106	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001127511	exon14	c.G3862T	p.E1288X	APC,pancreas,NS,Substitution - Missense,0	.	.
FBXO38	81545	hgsc.bcm.edu	36	5	147787099	147787099	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_205836	exon15	c.C2049T	p.A683A	.	.	.
FAT2	2196	hgsc.bcm.edu	36	5	150926453	150926453	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_001447	exon1	c.G2233T	p.G745C	.	.	.
SLIT3	6586	hgsc.bcm.edu	36	5	168553130	168553130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_003062	exon4	c.G344A	p.R115H	.	.	.
DOCK2	1794	hgsc.bcm.edu	36	5	169394035	169394035	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_004946	exon35	c.C3522T	p.F1174F	.	.	.
ERGIC1	57222	hgsc.bcm.edu	36	5	172256678	172256678	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	NM_001031711	exon3	c.A150C	p.T50T	.	.	.
NIPBL	25836	hgsc.bcm.edu	36	5	37050578	37050578	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_015384	exon22	c.A4597C	p.T1533P	.	.	.
NNT	23530	hgsc.bcm.edu	36	5	43692534	43692534	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	NM_182977	exon16	c.C2316A	p.L772L	.	.	.
ZNF826	664701	hgsc.bcm.edu	36	19	20369453	20369453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.			SOLID	.	.	.	.	.	.	.
TIMM44	10469	hgsc.bcm.edu	36	19	7904369	7904369	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AG-3587-01	TCGA-AG-3587-01	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454			SOLID	.	.	.	.	.	.	.
