| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LIHC/1216615/0.GDAC_clinicalDataMerger.Finished/LIHC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/clinical/2012_05_14/stage3_params_clin_lihc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | LIHC |
| Execution Times: | |
| Submitted: | 11:05:11 14-05-12 |
| Completed: | |
| Elapsed: | 00 hrs 03 mins 59 secs |
step 1. GDAC_clinicalDataPicker [id: 90683] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LIHC/1216615/0.GDAC_clinicalDataMerger.Finished/LIHC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/clinical/2012_05_14/stage3_params_clin_lihc.tsv |
| nodeColumn | 1 |
| outPrefix | LIHC |
| Output Files: | |
| LIHC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 11:05:12 14-05-12 |
| Completed: | 11:07:24 14-05-12 |
| Elapsed: | 00 hrs 02 mins 11 secs |
step 2. GDAC_clinicalDataPickerReport [id: 90684] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:44
| picked | LIHC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 11:05:12 14-05-12 |
| Completed: | 11:09:06 14-05-12 |
| Elapsed: | 00 hrs 03 mins 54 secs |