writing sdrf to CESC.merger.sdrf.txt

------------------------------------------------------------------
2012-07-02 17:19:12.609335
. ['/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_interactive/Axis1144055323319773864.att_dependentsValues1861500111614075388.tsv']

Make a softlink......

Flag: True.
Processing input file to make a softlink...: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_interactive/Axis1144055323319773864.att_dependentsValues1861500111614075388.tsv

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-BI-A0VR-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-BI-A0VS-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A0TN-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BE-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BF-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BI-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BJ-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BK-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BL-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BM-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1BN-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1M5-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1M6-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1M7-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1M8-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1M9-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1ME-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MF-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MH-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MI-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MJ-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MK-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1ML-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MN-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MP-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-C5-A1MQ-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-DR-A0ZL-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-DR-A0ZM-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-DS-A0VK-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-DS-A0VL-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-DS-A0VM-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-DS-A0VN-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-EA-A1QT-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-EX-A1H5-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-FU-A23K-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/cesc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-FU-A23L-01.wig.txt
('', None)
0
4f5937f26c49e73a0735a6a15da1ed36
It is in the dictionary
TCGA-BI-A0VR-01.wig.txt
Make a softlink is done.


