Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADAMTS12	81792	broad.mit.edu	37	5	33576716	33576716	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKAP8L	26993	broad.mit.edu	37	19	15491165	15491165	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD34A	284615	broad.mit.edu	37	1	145474166	145474166	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90349564	90349564	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP11A	9824	broad.mit.edu	37	15	32928531	32928531	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157511244	157511244	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATG9B	285973	broad.mit.edu	37	7	150715068	150715068	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53845394	53845394	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC14	64770	broad.mit.edu	37	3	123634543	123634543	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100964760	100964760	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21873953	21873953	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58589212	58589212	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94055151	94055151	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CREB3	10488	broad.mit.edu	37	9	35736669	35736669	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17110165	17110165	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52387249	52387249	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196729403	196729403	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4702286	4702286	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FNDC3A	22862	broad.mit.edu	37	13	49772609	49772609	+	Silent	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14846003	14846003	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133384990	133384990	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR110	266977	broad.mit.edu	37	6	46977033	46977033	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175301104	175301104	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIST1H4E	8367	broad.mit.edu	37	6	26205069	26205069	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGSF9	57549	broad.mit.edu	37	1	159897631	159897631	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0247	9766	broad.mit.edu	37	14	70170292	70170292	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76335071	76335071	+	De_novo_Start_OutOfFrame	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LOH12CR1	118426	broad.mit.edu	37	12	12618552	12618552	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRCC1	85444	broad.mit.edu	37	8	86019572	86019572	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MPG	4350	broad.mit.edu	37	16	133207	133207	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1093448	1093448	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUCB2	4925	broad.mit.edu	37	11	17351711	17351711	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228400286	228400286	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140209828	140209828	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PFAS	5198	broad.mit.edu	37	17	8168629	8168629	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96043555	96043555	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45568052	45568052	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PODXL	5420	broad.mit.edu	37	7	131241030	131241035	+	In_Frame_Del	DEL	GGCGAC	-	-	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	GGCGAC	GGCGAC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRODH2	58510	broad.mit.edu	37	19	36303703	36303703	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155123148	155123148	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127965927	127965927	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8419828	8419828	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHOB	388	broad.mit.edu	37	2	20647327	20647327	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9043470	9043470	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150923430	150923430	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107418619	107418619	+	Splice_Site	SNP	C	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNX13	23161	broad.mit.edu	37	7	17833769	17833769	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SRC	6714	broad.mit.edu	37	20	36024642	36024642	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27258869	27258869	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24307066	24307066	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TP53RK	112858	broad.mit.edu	37	20	45315610	45315610	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UNC5CL	222643	broad.mit.edu	37	6	41002736	41002736	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VAV2	7410	broad.mit.edu	37	9	136649535	136649535	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68611602	68611602	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3363-01	TCGA-A3-3363-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
