Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCC8	6833	broad.mit.edu	37	11	17418564	17418564	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALOX15B	247	broad.mit.edu	37	17	7942501	7942501	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	70017113	70017113	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	70031793	70031793	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AOC3	8639	broad.mit.edu	37	17	41004871	41004871	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144062338	144062338	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARMC4	55130	broad.mit.edu	37	10	28233812	28233812	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP5C1	509	broad.mit.edu	37	10	7839091	7839091	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90660625	90660625	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BTC	685	broad.mit.edu	37	4	75695313	75695313	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C6orf222	389384	broad.mit.edu	37	6	36294388	36294388	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73544690	73544690	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63547734	63547734	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175614794	175614794	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLVS1	157807	broad.mit.edu	37	8	62212689	62212689	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238249699	238249699	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CXCR6	10663	broad.mit.edu	37	3	45988808	45988808	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42828502	42828502	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21147728	21147728	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28898303	28898303	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHA2	1969	broad.mit.edu	37	1	16458586	16458586	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108381263	108381263	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87500826	87500826	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47774573	47774573	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131234681	131234681	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62396249	62396249	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GBGT1	26301	broad.mit.edu	37	9	136029294	136029294	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GM2A	2760	broad.mit.edu	37	5	150646946	150646946	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GNB1L	54584	broad.mit.edu	37	22	19776236	19776236	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11772090	11772090	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HMHA1	23526	broad.mit.edu	37	19	1074198	1074198	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47409096	47409096	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL3	3562	broad.mit.edu	37	5	131396700	131396700	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64936178	64936178	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLHL15	80311	broad.mit.edu	37	X	24006422	24006422	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLHL38	340359	broad.mit.edu	37	8	124664647	124664647	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAYN	143903	broad.mit.edu	37	11	111431066	111431066	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75298336	75298336	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100395756	100395756	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154862150	154862150	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTUS1	57509	broad.mit.edu	37	8	17612685	17612685	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36723503	36723504	+	Splice_Site	INS	-	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62850364	62850364	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NDUFA13	51079	broad.mit.edu	37	19	19627139	19627139	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56244059	56244059	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NMRAL1	57407	broad.mit.edu	37	16	4511892	4511892	+	Silent	SNP	G	A	A	rs1043380	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUDT6	11162	broad.mit.edu	37	4	123843511	123843511	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ONECUT1	3175	broad.mit.edu	37	15	53081592	53081592	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52651339	52651339	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PGF	5228	broad.mit.edu	37	14	75416059	75416059	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIRT	644139	broad.mit.edu	37	17	10728814	10728814	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASA1	5921	broad.mit.edu	37	5	86564517	86564517	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4771138	4771138	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18549140	18549140	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPL22	6146	broad.mit.edu	37	1	6246862	6246862	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SH2D7	646892	broad.mit.edu	37	15	78393441	78393441	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51117747	51117747	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC16A1	6566	broad.mit.edu	37	1	113456771	113456771	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNX7	51375	broad.mit.edu	37	1	99156689	99156689	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SP8	221833	broad.mit.edu	37	7	20824941	20824943	+	In_Frame_Del	DEL	GCC	-	-	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	GCC	GCC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SRP9	6726	broad.mit.edu	37	1	225971002	225971002	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC4	7268	broad.mit.edu	37	1	55182358	55182358	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5033938	5033938	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188262	10188263	+	Frame_Shift_Ins	INS	-	TTTT	TTTT	rs119103278	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF333	84449	broad.mit.edu	37	19	14829357	14829357	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF341	84905	broad.mit.edu	37	20	32379290	32379290	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF584	201514	broad.mit.edu	37	19	58921394	58921394	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF765	91661	broad.mit.edu	37	19	53912142	53912142	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF91	7644	broad.mit.edu	37	19	23545331	23545331	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238048491	238048491	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3367-01	TCGA-A3-3367-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
