Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACSM4	341392	hgsc.bcm.edu	37	12	7459281	7459281	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C1orf151	.	hgsc.bcm.edu	37	1	19949996	19949996	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C1QC	714	hgsc.bcm.edu	37	1	22973841	22973841	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDH5	1003	hgsc.bcm.edu	37	16	66430033	66430033	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CENPC1	1060	hgsc.bcm.edu	37	4	68384984	68384984	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CNTLN	54875	hgsc.bcm.edu	37	9	17462926	17462926	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CREBBP	1387	hgsc.bcm.edu	37	16	3789724	3789724	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EZH2	2146	hgsc.bcm.edu	37	7	148524257	148524257	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GALNT2	2590	hgsc.bcm.edu	37	1	230398728	230398728	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GLI3	2737	hgsc.bcm.edu	37	7	42003966	42003966	+	Missense_Mutation	SNP	G	G	C	rs35765130	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPR101	83550	hgsc.bcm.edu	37	X	136112591	136112591	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPR112	139378	hgsc.bcm.edu	37	X	135429927	135429927	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDE4C	5143	hgsc.bcm.edu	37	19	18328978	18328978	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PIRT	644139	hgsc.bcm.edu	37	17	10728777	10728777	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
POLD1	5424	hgsc.bcm.edu	37	19	50906786	50906786	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC45A2	51151	hgsc.bcm.edu	37	5	33951772	33951772	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
STX19	415117	hgsc.bcm.edu	37	3	93733283	93733283	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SYT12	91683	hgsc.bcm.edu	37	11	66813240	66813240	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TADA2A	6871	hgsc.bcm.edu	37	17	35804809	35804809	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TCF20	6942	hgsc.bcm.edu	37	22	42609019	42609019	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
THSD7B	80731	hgsc.bcm.edu	37	2	138330034	138330034	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMEM50B	757	hgsc.bcm.edu	37	21	34841149	34841149	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
USP15	9958	hgsc.bcm.edu	37	12	62798002	62798002	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
USP8	9101	hgsc.bcm.edu	37	15	50791105	50791105	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VN1R2	317701	hgsc.bcm.edu	37	19	53762336	53762336	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZCCHC5	203430	hgsc.bcm.edu	37	X	77913714	77913714	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF792	126375	hgsc.bcm.edu	37	19	35449369	35449369	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B0-5080-01A-01D-1501-10	TCGA-B0-5080-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
