Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A4GNT	51146	broad.mit.edu	37	3	137843327	137843327	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89016750	89016750	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALB	213	broad.mit.edu	37	4	74283985	74283985	+	Missense_Mutation	SNP	A	G	G	rs77081291	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP11B	89839	broad.mit.edu	37	15	30919056	30919056	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASH2L	9070	broad.mit.edu	37	8	37967896	37967896	+	Splice_Site	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119509282	119509282	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAP1	8314	broad.mit.edu	37	3	52443894	52443894	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56535341	56535341	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BDKRB1	623	broad.mit.edu	37	14	96730316	96730316	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C2orf89	129293	broad.mit.edu	37	2	85097390	85097390	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAPZA2	830	broad.mit.edu	37	7	116533094	116533094	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCNF	899	broad.mit.edu	37	16	2506613	2506613	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCNI	10983	broad.mit.edu	37	4	77969663	77969663	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDC27	996	broad.mit.edu	37	17	45219300	45219300	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDCA2	157313	broad.mit.edu	37	8	25364407	25364407	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34855139	34855139	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CGNL1	84952	broad.mit.edu	37	15	57836715	57836715	+	Nonsense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107935977	107935977	+	Splice_Site	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107431170	107431170	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPSF7	79869	broad.mit.edu	37	11	61188976	61188976	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYBRD1	79901	broad.mit.edu	37	2	172411334	172411334	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DLX4	1748	broad.mit.edu	37	17	48050513	48050513	+	Silent	SNP	G	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132245126	132245126	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167095901	167095901	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EHMT2	10919	broad.mit.edu	37	6	31855386	31855386	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6896425	6896425	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERICH1	157697	broad.mit.edu	37	8	623372	623372	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM9A	171482	broad.mit.edu	37	X	8764374	8764374	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FNBP1L	54874	broad.mit.edu	37	1	93987691	93987691	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FOXP4	116113	broad.mit.edu	37	6	41554889	41554889	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAMT	2593	broad.mit.edu	37	19	1398924	1398924	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109100728	109100728	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GNAI3	2773	broad.mit.edu	37	1	110129422	110129422	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GOT2	2806	broad.mit.edu	37	16	58757714	58757714	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPX8	493869	broad.mit.edu	37	5	54459987	54459987	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GSS	2937	broad.mit.edu	37	20	33529582	33529582	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63970224	63970224	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HN1L	90861	broad.mit.edu	37	16	1748907	1748907	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163241431	163241431	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107596066	107596066	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107720165	107720165	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145557190	145557190	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LZTS1	11178	broad.mit.edu	37	8	20107281	20107281	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR222	407007	broad.mit.edu	37	X	45606471	45606471	+	miRNA	SNP	C	T	T	rs72631825	byFrequency	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151859848	151859848	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLXIPL	51085	broad.mit.edu	37	7	73011232	73011232	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108788593	108788593	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30557623	30557623	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149900042	149900042	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1016334	1016334	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24408528	24408528	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89907078	89907078	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NACA	4666	broad.mit.edu	37	12	57113130	57113130	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFYC	4802	broad.mit.edu	37	1	41218906	41218906	+	Silent	SNP	T	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRC3	197358	broad.mit.edu	37	16	3614126	3614127	+	Missense_Mutation	DNP	GC	AT	AT	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	GC	GC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32170158	32170158	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193355797	193355797	+	Silent	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR12D3	81797	broad.mit.edu	37	6	29342284	29342284	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76786494	76786494	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OTX1	5013	broad.mit.edu	37	2	63282664	63282664	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52651339	52651339	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDYN	5173	broad.mit.edu	37	20	1961113	1961113	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327461	57327461	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PKNOX1	5316	broad.mit.edu	37	21	44448816	44448816	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42363506	42363506	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PNPLA4	8228	broad.mit.edu	37	X	7889834	7889834	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128186505	128186505	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSAPL1	768239	broad.mit.edu	37	4	7436245	7436245	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM15	64783	broad.mit.edu	37	1	110883213	110883213	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51961243	51961243	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC35F5	80255	broad.mit.edu	37	2	114512805	114512805	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC39A10	57181	broad.mit.edu	37	2	196545178	196545178	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	142987800	142987800	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNRNP48	154007	broad.mit.edu	37	6	7605680	7605680	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	8051125	8051125	+	Silent	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TCF12	6938	broad.mit.edu	37	15	57565320	57565320	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THOC3	84321	broad.mit.edu	37	5	175387036	175387036	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TP53BP1	7158	broad.mit.edu	37	15	43748161	43748161	+	Nonsense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179417031	179417031	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179587903	179587903	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179665198	179665198	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TXNRD2	10587	broad.mit.edu	37	22	19883099	19883099	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP40	55230	broad.mit.edu	37	2	234431845	234431845	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30884693	30884694	+	Missense_Mutation	DNP	GT	AC	AC	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188197	10188197	+	Splice_Site	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12423192	12423192	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1920240	1920240	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XRN1	54464	broad.mit.edu	37	3	142030531	142030531	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZC3HC1	51530	broad.mit.edu	37	7	129666109	129666110	+	Missense_Mutation	DNP	TC	AA	AA	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	TC	TC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768068	77768068	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZHX2	22882	broad.mit.edu	37	8	123963970	123963970	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF124	7678	broad.mit.edu	37	1	247322364	247322364	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF516	9658	broad.mit.edu	37	18	74154244	74154244	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5096-01	TCGA-B0-5096-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
