Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AGMAT	79814	hgsc.bcm.edu	37	1	15905364	15905364	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ANO10	55129	hgsc.bcm.edu	37	3	43618256	43618256	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ANP32C	23520	hgsc.bcm.edu	37	4	165118362	165118362	+	Nonsense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ARSF	416	hgsc.bcm.edu	37	X	3007535	3007535	+	Splice_Site	SNP	A	A	G	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CDHR3	222256	hgsc.bcm.edu	37	7	105672876	105672876	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CIITA	4261	hgsc.bcm.edu	37	16	11001467	11001467	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CNTNAP5	129684	hgsc.bcm.edu	37	2	125261996	125261996	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
COBL	23242	hgsc.bcm.edu	37	7	51095591	51095591	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DDB1	1642	hgsc.bcm.edu	37	11	61097462	61097462	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM55C	91775	hgsc.bcm.edu	37	3	101540501	101540501	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAR2	55711	hgsc.bcm.edu	37	12	29469894	29469894	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FBP1	2203	hgsc.bcm.edu	37	9	97369216	97369216	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
GRB7	2886	hgsc.bcm.edu	37	17	37898909	37898909	+	Silent	SNP	A	A	C	rs36079893	unknown	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
IGSF9B	22997	hgsc.bcm.edu	37	11	133807740	133807740	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
JMJD1C	221037	hgsc.bcm.edu	37	10	64967020	64967020	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KRTAP25-1	100131902	hgsc.bcm.edu	37	21	31661643	31661643	+	Missense_Mutation	SNP	T	T	C	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MESDC2	23184	hgsc.bcm.edu	37	15	81274514	81274514	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYBPC2	4606	hgsc.bcm.edu	37	19	50963349	50963349	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYH11	4629	hgsc.bcm.edu	37	16	15931773	15931773	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYO18B	84700	hgsc.bcm.edu	37	22	26291196	26291196	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PAPOLG	64895	hgsc.bcm.edu	37	2	61024285	61024285	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PROX2	283571	hgsc.bcm.edu	37	14	75329730	75329730	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SCIN	85477	hgsc.bcm.edu	37	7	12620697	12620697	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SELP	6403	hgsc.bcm.edu	37	1	169588410	169588410	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SIDT2	51092	hgsc.bcm.edu	37	11	117058118	117058118	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SPTB	6710	hgsc.bcm.edu	37	14	65264450	65264450	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
THBS4	7060	hgsc.bcm.edu	37	5	79375847	79375847	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMEM54	113452	hgsc.bcm.edu	37	1	33360429	33360429	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMEM54	113452	hgsc.bcm.edu	37	1	33360433	33360433	+	Frame_Shift_Del	DEL	G	G	-	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TREH	11181	hgsc.bcm.edu	37	11	118531934	118531934	+	Silent	SNP	G	G	C	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TTC37	9652	hgsc.bcm.edu	37	5	94852697	94852697	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZBTB20	26137	hgsc.bcm.edu	37	3	114058034	114058034	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4349-01A-01D-1366-10	TCGA-BP-4349-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
