Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACAN	176	broad.mit.edu	37	15	89386810	89386810	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131896814	131896814	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARL11	115761	broad.mit.edu	37	13	50204841	50204841	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAP1	8314	broad.mit.edu	37	3	52443892	52443892	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64108611	64108611	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7647754	7647754	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184103856	184103856	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122273322	122273322	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CMIP	80790	broad.mit.edu	37	16	81712128	81712128	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DBH	1621	broad.mit.edu	37	9	136505100	136505100	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ECSIT	51295	broad.mit.edu	37	19	11618611	11618611	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERCC1	2067	broad.mit.edu	37	19	45923622	45923622	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FECH	2235	broad.mit.edu	37	18	55221616	55221616	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	31023608	31023608	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HMGCR	3156	broad.mit.edu	37	5	74643063	74643063	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0664	23277	broad.mit.edu	37	17	2606746	2606746	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LCE1A	353131	broad.mit.edu	37	1	152800036	152800036	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFI2	4241	broad.mit.edu	37	3	196733606	196733606	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271918	1271918	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCDN	23154	broad.mit.edu	37	1	36026446	36026446	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NIPAL4	348938	broad.mit.edu	37	5	156899742	156899742	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NONO	4841	broad.mit.edu	37	X	70511743	70511743	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NR1I2	8856	broad.mit.edu	37	3	119535982	119535982	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6611190	6611190	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8253332	8253332	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RIC8A	60626	broad.mit.edu	37	11	212621	212621	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83590955	83590955	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117052642	117052642	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC26A11	284129	broad.mit.edu	37	17	78199688	78199688	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44547760	44547760	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8390936	8390936	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2056787	2056787	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23818384	23818384	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35771808	35771808	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPINK5	11005	broad.mit.edu	37	5	147481422	147481423	+	Missense_Mutation	DNP	CC	AA	AA	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	CC	CC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNJ1	8867	broad.mit.edu	37	21	34011316	34011316	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160035470	160035470	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TFR2	7036	broad.mit.edu	37	7	100226966	100226966	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179452123	179452123	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4962-01	TCGA-BP-4962-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
