Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADAMTS19	171019	broad.mit.edu	37	5	129070698	129070698	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29346935	29346935	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C6orf47	57827	broad.mit.edu	37	6	31627292	31627292	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CC2D2A	57545	broad.mit.edu	37	4	15511767	15511767	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNTF	1270	broad.mit.edu	37	11	58391797	58391797	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10071471	10071471	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148552315	148552315	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CREM	1390	broad.mit.edu	37	10	35495906	35495906	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DMKN	93099	broad.mit.edu	37	19	36003602	36003602	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21151927	21151927	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117352764	117352764	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ECSIT	51295	broad.mit.edu	37	19	11618640	11618640	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28405489	28405489	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37136321	37136321	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FASN	2194	broad.mit.edu	37	17	80046746	80046746	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157767975	157767975	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FGF23	8074	broad.mit.edu	37	12	4479729	4479729	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49420020	49420021	+	Missense_Mutation	DNP	CC	GT	GT	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	CC	CC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FUBP3	8939	broad.mit.edu	37	9	133491783	133491783	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GGT1	2678	broad.mit.edu	37	22	25010806	25010806	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GJA5	2702	broad.mit.edu	37	1	147230622	147230622	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121742131	121742131	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108636245	108636245	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXB13	10481	broad.mit.edu	37	17	46805884	46805884	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47470003	47470003	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53612105	53612105	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT35	3886	broad.mit.edu	37	17	39635602	39635602	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MEGF9	1955	broad.mit.edu	37	9	123476115	123476115	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFGE8	4240	broad.mit.edu	37	15	89449935	89449935	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56350261	56350261	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MSN	4478	broad.mit.edu	37	X	64959702	64959702	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOL9	79707	broad.mit.edu	37	1	6592628	6592628	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR51E1	143503	broad.mit.edu	37	11	4674482	4674482	+	Silent	SNP	T	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94642074	94642074	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLG2	11232	broad.mit.edu	37	17	62474074	62474074	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106820975	106820975	+	Missense_Mutation	SNP	C	T	T	rs118093172	by1000genomes	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHOT2	89941	broad.mit.edu	37	16	722787	722787	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINA1	5265	broad.mit.edu	37	14	94844895	94844895	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	156074477	156074477	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC12A4	6560	broad.mit.edu	37	16	67980916	67980916	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC27A6	28965	broad.mit.edu	37	5	128302249	128302249	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC7A11	23657	broad.mit.edu	37	4	139100476	139100476	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC7A8	23428	broad.mit.edu	37	14	23608686	23608686	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPAM1	6677	broad.mit.edu	37	7	123594289	123594289	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STK3	6788	broad.mit.edu	37	8	99718731	99718731	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152084627	152084627	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TM6SF1	53346	broad.mit.edu	37	15	83805262	83805262	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRIM25	7706	broad.mit.edu	37	17	54985850	54985850	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98547298	98547298	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR26	80232	broad.mit.edu	37	1	224599175	224599175	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4991-01	TCGA-BP-4991-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
