Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCC1	4363	broad.mit.edu	37	16	16149977	16149977	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44065039	44065039	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112167663	112167663	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACO1	48	broad.mit.edu	37	9	32425989	32425989	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136290722	136290722	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADCK5	203054	broad.mit.edu	37	8	145617535	145617549	+	Splice_Site	DEL	GGGGGTGCAAGGTGA	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	GGGGGTGCAAGGTGA	GGGGGTGCAAGGTGA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11204520	11204520	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASB1	51665	broad.mit.edu	37	2	239353054	239353054	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
B3GNT6	192134	broad.mit.edu	37	11	76751055	76751055	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7727745	7727745	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf128	57095	broad.mit.edu	37	1	24106410	24106410	+	Nonsense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C6orf58	352999	broad.mit.edu	37	6	127901450	127901450	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114518734	114518734	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85851226	85851226	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAPZA2	830	broad.mit.edu	37	7	116538867	116538867	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CASKIN1	57524	broad.mit.edu	37	16	2230531	2230532	+	Frame_Shift_Ins	INS	-	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCNDBP1	23582	broad.mit.edu	37	15	43482264	43482264	+	Silent	SNP	A	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHI3L1	1116	broad.mit.edu	37	1	203155750	203155750	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLEC12A	160364	broad.mit.edu	37	12	10132016	10132016	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLEC12A	160364	broad.mit.edu	37	12	10132045	10132045	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122826194	122826194	+	Silent	SNP	T	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNRIP1	25927	broad.mit.edu	37	2	68546472	68546472	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110835582	110835582	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COLEC10	10584	broad.mit.edu	37	8	120101991	120101991	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPNE1	8904	broad.mit.edu	37	20	34219486	34219486	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPXM1	56265	broad.mit.edu	37	20	2775211	2775211	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1422842	1422842	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113421242	113421242	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DFNA5	1687	broad.mit.edu	37	7	24738852	24738852	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHRS4L2	317749	broad.mit.edu	37	14	24459472	24459472	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113858392	113858392	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EDC4	23644	broad.mit.edu	37	16	67912713	67912713	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPS8L2	64787	broad.mit.edu	37	11	710481	710481	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM101A	144347	broad.mit.edu	37	12	124798830	124798830	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FASTKD2	22868	broad.mit.edu	37	2	207639092	207639092	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142445230	142445230	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FPGS	2356	broad.mit.edu	37	9	130575544	130575544	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202847	39202847	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113627861	113627861	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
H3F3C	440093	broad.mit.edu	37	12	31944927	31944927	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186151399	186151399	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HPS6	79803	broad.mit.edu	37	10	103827518	103827518	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94297189	94297189	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IDI2	91734	broad.mit.edu	37	10	1066837	1066837	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24535240	24535240	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KHK	3795	broad.mit.edu	37	2	27320383	27320383	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LACTB	114294	broad.mit.edu	37	15	63419762	63419762	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133914405	133914405	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154191178	154191185	+	Frame_Shift_Del	DEL	GTCTTGAA	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	GTCTTGAA	GTCTTGAA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMBR1L	55716	broad.mit.edu	37	12	49496928	49496928	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LPCAT3	10162	broad.mit.edu	37	12	7086391	7086391	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC8B	23507	broad.mit.edu	37	1	90048980	90048980	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRIQ4	344657	broad.mit.edu	37	3	169555371	169555371	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAML1	9794	broad.mit.edu	37	5	179193308	179193308	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAP1S	55201	broad.mit.edu	37	19	17838751	17838751	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFAP3L	9848	broad.mit.edu	37	4	170913100	170913100	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118352713	118352713	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLXIPL	51085	broad.mit.edu	37	7	73011708	73011708	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MSL1	339287	broad.mit.edu	37	17	38285875	38285875	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1017614	1017614	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102067221	102067221	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYCBP	26292	broad.mit.edu	37	1	39338699	39338700	+	Frame_Shift_Del	DEL	GC	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	GC	GC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO5C	55930	broad.mit.edu	37	15	52521378	52521378	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97024901	97024901	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71050557	71050557	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFIX	4784	broad.mit.edu	37	19	13192531	13192531	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52534720	52534720	+	Silent	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NKX2-2	4821	broad.mit.edu	37	20	21494259	21494259	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOXA1	10811	broad.mit.edu	37	9	140323753	140323754	+	Frame_Shift_Ins	INS	-	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NPNT	255743	broad.mit.edu	37	4	106861265	106861265	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228559759	228559759	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR1B1	347169	broad.mit.edu	37	9	125391234	125391234	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR51A2	401667	broad.mit.edu	37	11	4976107	4976107	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR8G2	26492	broad.mit.edu	37	11	124095984	124095984	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OTUD6B	51633	broad.mit.edu	37	8	92083453	92083453	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PACS2	23241	broad.mit.edu	37	14	105843253	105843253	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52623262	52623262	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB13	56123	broad.mit.edu	37	5	140596070	140596070	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92132412	92132414	+	In_Frame_Del	DEL	AAC	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	AAC	AAC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42036456	42036456	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP1R10	5514	broad.mit.edu	37	6	30569885	30569885	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87679432	87679432	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157985188	157985188	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PVRL3	25945	broad.mit.edu	37	3	110837735	110837735	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBAK	57786	broad.mit.edu	37	7	5104366	5104366	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113285641	113285641	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPN2	6185	broad.mit.edu	37	20	35832332	35832332	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RRM2	6241	broad.mit.edu	37	2	10269379	10269379	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23909182	23909182	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCARA3	51435	broad.mit.edu	37	8	27509086	27509086	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCRIB	23513	broad.mit.edu	37	8	144874929	144874929	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCRT2	85508	broad.mit.edu	37	20	656174	656174	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETD4	54093	broad.mit.edu	37	21	37418054	37418054	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46322466	46322466	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SH2D3A	10045	broad.mit.edu	37	19	6754947	6754947	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SKIV2L2	23517	broad.mit.edu	37	5	54701366	54701366	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC16A14	151473	broad.mit.edu	37	2	230910577	230910577	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC33A1	9197	broad.mit.edu	37	3	155571512	155571512	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SON	6651	broad.mit.edu	37	21	34925507	34925507	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SUOX	6821	broad.mit.edu	37	12	56396036	56396036	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152757208	152757208	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TACR2	6865	broad.mit.edu	37	10	71166878	71166878	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222750908	222750908	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THAP5	168451	broad.mit.edu	37	7	108205177	108205177	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM179B	374395	broad.mit.edu	37	11	62557433	62557433	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM67	91147	broad.mit.edu	37	8	94821184	94821184	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68692994	68692994	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TOP1MT	116447	broad.mit.edu	37	8	144411529	144411529	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72956769	72956769	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC37	9652	broad.mit.edu	37	5	94860289	94860289	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUBGCP3	10426	broad.mit.edu	37	13	113242269	113242269	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41088595	41088595	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VNN2	8875	broad.mit.edu	37	6	133065439	133065439	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VRK3	51231	broad.mit.edu	37	19	50512604	50512604	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39206807	39206807	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR81	124997	broad.mit.edu	37	17	1634217	1634217	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99213291	99213292	+	Missense_Mutation	DNP	GC	TA	TA	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	GC	GC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF317	57693	broad.mit.edu	37	19	9270970	9270970	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22847963	22847963	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF561	93134	broad.mit.edu	37	19	9724746	9724746	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF677	342926	broad.mit.edu	37	19	53740381	53740381	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5168-01	TCGA-BP-5168-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
