Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AGAP1	116987	broad.mit.edu	37	2	236706509	236706509	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9256041	9256042	+	Frame_Shift_Del	DEL	AA	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	AA	AA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29400578	29400578	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115298600	115298600	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP20	57569	broad.mit.edu	37	11	110451607	110451607	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARMC4	55130	broad.mit.edu	37	10	28270411	28270411	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142184019	142184019	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATXN7L2	127002	broad.mit.edu	37	1	110031529	110031529	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AVIL	10677	broad.mit.edu	37	12	58207208	58207208	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24463082	24463082	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CALU	813	broad.mit.edu	37	7	128407619	128407619	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDK8	1024	broad.mit.edu	37	13	26923220	26923220	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4892566	4892566	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHI3L1	1116	broad.mit.edu	37	1	203148901	203148901	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53035798	53035798	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58594198	58594198	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129938646	129938646	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DAAM1	23002	broad.mit.edu	37	14	59834206	59834206	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DDX21	9188	broad.mit.edu	37	10	70733381	70733381	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DDX54	79039	broad.mit.edu	37	12	113618759	113618759	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DDX58	23586	broad.mit.edu	37	9	32488009	32488009	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65959941	65959942	+	Frame_Shift_Del	DEL	TC	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	TC	TC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6519865	6519865	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF4ENIF1	56478	broad.mit.edu	37	22	31850208	31850208	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22920016	22920016	+	Splice_Site	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM71C	196472	broad.mit.edu	37	12	100042363	100042363	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8175825	8175825	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FEM1C	56929	broad.mit.edu	37	5	114878826	114878826	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286259	152286260	+	Frame_Shift_Del	DEL	TG	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	TG	TG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FOXR1	283150	broad.mit.edu	37	11	118849549	118849551	+	Missense_Mutation	Complex_substitution	CNA	TNT	TNT	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	CNA	CNA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FSCN1	6624	broad.mit.edu	37	7	5632742	5632742	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAL3ST1	9514	broad.mit.edu	37	22	30952062	30952062	+	Frame_Shift_Del	DEL	C	-	-	rs73394272	by1000genomes	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104111114	104111114	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12164030	12164030	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	97484944	97484944	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INSL6	11172	broad.mit.edu	37	9	5185530	5185530	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52854657	52854657	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KBTBD6	89890	broad.mit.edu	37	13	41704758	41704758	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59949659	59949659	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLRC2	3822	broad.mit.edu	37	12	10584769	10584769	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRTAP4-12	83755	broad.mit.edu	37	17	39279933	39279933	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651191	1651199	+	In_Frame_Del	DEL	GGCTGTGGA	-	-	rs35089393	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	GGCTGTGGA	GGCTGTGGA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP11	84918	broad.mit.edu	37	6	150164137	150164138	+	Missense_Mutation	DNP	CG	TA	TA	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	CG	CG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141643767	141643767	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAML1	9794	broad.mit.edu	37	5	179193074	179193074	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183029534	183029534	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60038959	60038959	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MED18	54797	broad.mit.edu	37	1	28661113	28661113	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYCN	4613	broad.mit.edu	37	2	16085629	16085629	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10436864	10436864	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76893001	76893001	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NAF1	92345	broad.mit.edu	37	4	164050071	164050071	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54313706	54313706	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54313711	54313711	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132419270	132419270	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47833875	47833875	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020376	5020376	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR51Q1	390061	broad.mit.edu	37	11	5443672	5443672	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52584552	52584552	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140346845	140346845	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHGB7	56099	broad.mit.edu	37	5	140798869	140798869	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHGC5	56097	broad.mit.edu	37	5	140870296	140870296	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544733	82544733	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PGPEP1L	145814	broad.mit.edu	37	15	99511854	99511854	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159499107	159499107	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPM1B	5495	broad.mit.edu	37	2	44428909	44428909	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
QSOX2	169714	broad.mit.edu	37	9	139118696	139118696	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF19B	127544	broad.mit.edu	37	1	33415334	33415334	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RTF1	23168	broad.mit.edu	37	15	41762545	41762545	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83719576	83719576	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SNAI3	333929	broad.mit.edu	37	16	88744902	88744902	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SOX9	6662	broad.mit.edu	37	17	70119068	70119068	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26920003	26920003	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAF7L	54457	broad.mit.edu	37	X	100541631	100541631	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44555134	44555134	+	Nonsense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNFRSF1A	7132	broad.mit.edu	37	12	6440021	6440021	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179428026	179428026	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179441832	179441832	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TULP4	56995	broad.mit.edu	37	6	158923758	158923758	+	Silent	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154229659	154229659	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UNK	85451	broad.mit.edu	37	17	73814848	73814848	+	Silent	SNP	A	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17531374	17531374	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP40	55230	broad.mit.edu	37	2	234431973	234431973	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188207	10188207	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141162598	141162598	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB43	23099	broad.mit.edu	37	9	129595818	129595818	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138794026	138794026	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF687	57592	broad.mit.edu	37	1	151259347	151259347	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801058	185801058	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5185-01	TCGA-BP-5185-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
