Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADAMTS14	140766	broad.mit.edu	37	10	72496510	72496510	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91736718	91736718	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD34B	340120	broad.mit.edu	37	5	79854670	79854670	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160098797	160098797	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf71	118461	broad.mit.edu	37	10	50532616	50532616	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47847043	47847043	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106209950	106209950	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLK1	1195	broad.mit.edu	37	2	201719363	201719363	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COLEC10	10584	broad.mit.edu	37	8	120118232	120118232	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CTSB	1508	broad.mit.edu	37	8	11703216	11703216	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143994277	143994277	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF2B2	8892	broad.mit.edu	37	14	75475794	75475794	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132446055	132446055	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM65A	79567	broad.mit.edu	37	16	67579292	67579292	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FHOD1	29109	broad.mit.edu	37	16	67265179	67265179	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FTL	2512	broad.mit.edu	37	19	49469167	49469167	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22749618	22749618	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GTPBP8	29083	broad.mit.edu	37	3	112718328	112718328	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HSH2D	84941	broad.mit.edu	37	19	16263872	16263872	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM5C	8242	broad.mit.edu	37	X	53225887	53225887	+	Frame_Shift_Del	DEL	G	-	-	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58937442	58937442	+	Splice_Site	SNP	G	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LOXL1	4016	broad.mit.edu	37	15	74239564	74239564	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83940609	83940609	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10351442	10351442	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NAT8	9027	broad.mit.edu	37	2	73868095	73868095	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4C3	256144	broad.mit.edu	37	11	48346849	48346849	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149920957	149920957	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PARP16	54956	broad.mit.edu	37	15	65551800	65551800	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52595822	52595822	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PFKFB4	5210	broad.mit.edu	37	3	48573722	48573722	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	16838838	16838838	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	16847952	16847952	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	145980011	145980011	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55710122	55710122	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RALGAPA1	253959	broad.mit.edu	37	14	36125081	36125081	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ROR1	4919	broad.mit.edu	37	1	64643611	64643611	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33822793	33822793	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148853944	148853944	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCAMP2	10066	broad.mit.edu	37	15	75142952	75142952	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEC14L1	6397	broad.mit.edu	37	17	75209495	75209495	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142716848	142716848	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SORT1	6272	broad.mit.edu	37	1	109888450	109888450	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191900934	191900934	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117848654	117848654	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBLCP1	134510	broad.mit.edu	37	5	158696067	158696067	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ULK1	8408	broad.mit.edu	37	12	132400471	132400471	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF212	7988	broad.mit.edu	37	7	148947875	148947875	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF93	81931	broad.mit.edu	37	19	20044531	20044531	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5189-01	TCGA-BP-5189-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
