Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA3	21	broad.mit.edu	37	16	2328063	2328063	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABI3	51225	broad.mit.edu	37	17	47299454	47299454	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35581913	35581913	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACP2	53	broad.mit.edu	37	11	47264856	47264856	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33500951	33500951	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACTBL2	345651	broad.mit.edu	37	5	56778275	56778275	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67050628	67050628	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP20	57569	broad.mit.edu	37	11	110462785	110462785	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56779390	56779390	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119568087	119568087	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105942200	105942200	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C12orf41	54934	broad.mit.edu	37	12	49047945	49047945	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf103	55791	broad.mit.edu	37	1	111494480	111494480	+	Silent	SNP	A	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6262833	6262833	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46912469	46912469	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16882524	16882524	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DDX10	1662	broad.mit.edu	37	11	108810996	108810996	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FGFR3	2261	broad.mit.edu	37	4	1807850	1807850	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19746368	19746368	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201190737	201190737	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL17RD	54756	broad.mit.edu	37	3	57139906	57139906	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44248412	44248412	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLLT1	4298	broad.mit.edu	37	19	6270745	6270745	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MRVI1	10335	broad.mit.edu	37	11	10647673	10647673	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MXRA7	439921	broad.mit.edu	37	17	74673741	74673741	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52661377	52661377	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RDBP	7936	broad.mit.edu	37	6	31922556	31922556	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCRN2	90507	broad.mit.edu	37	17	45918176	45918176	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92008488	92008488	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC35A1	10559	broad.mit.edu	37	6	88210968	88210968	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27023953	27023953	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSEN2	80746	broad.mit.edu	37	3	12544895	12544895	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS28	51160	broad.mit.edu	37	8	145649316	145649316	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VSIG1	340547	broad.mit.edu	37	X	107319363	107319363	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35457966	35457966	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4908-01	TCGA-CJ-4908-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
