Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACACB	32	broad.mit.edu	37	12	109702175	109702175	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACTBL2	345651	broad.mit.edu	37	5	56777710	56777710	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62284360	62284360	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHSG	197	broad.mit.edu	37	3	186335070	186335070	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41727096	41727096	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93784657	93784657	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56620818	56620818	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1GALT1C1	29071	broad.mit.edu	37	X	119760539	119760539	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118766138	118766138	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCND3	896	broad.mit.edu	37	6	41904303	41904303	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100381784	100381784	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRYBG3	131544	broad.mit.edu	37	3	97614877	97614877	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6661620	6661620	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124270368	124270368	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32459638	32459638	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45433179	45433179	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM91A1	157769	broad.mit.edu	37	8	124817571	124817571	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBXL14	144699	broad.mit.edu	37	12	1702196	1702196	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBXO11	80204	broad.mit.edu	37	2	48066061	48066061	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36029250	36029250	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR128	84873	broad.mit.edu	37	3	100354672	100354672	+	Splice_Site	SNP	T	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187500900	187500900	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KAL1	3730	broad.mit.edu	37	X	8504907	8504907	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141116420	141116420	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116339927	116339927	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222794531	222794531	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62839353	62839353	+	Silent	SNP	A	G	G	rs117924425	by1000genomes	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NTF4	4909	broad.mit.edu	37	19	49564851	49564851	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112971	248112971	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PELI2	57161	broad.mit.edu	37	14	56757051	56757052	+	Missense_Mutation	DNP	GG	TT	TT	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	GG	GG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHF17	79960	broad.mit.edu	37	4	129789065	129789065	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123471023	123471023	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP1R13L	10848	broad.mit.edu	37	19	45901534	45901534	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38802744	38802744	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINB10	5273	broad.mit.edu	37	18	61600419	61600419	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98945307	98945307	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMC5	23137	broad.mit.edu	37	9	72933592	72933592	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPATA5L1	79029	broad.mit.edu	37	15	45695510	45695510	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123179154	123179154	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219561786	219561786	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAF1C	9013	broad.mit.edu	37	16	84216939	84216939	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TCEAL2	140597	broad.mit.edu	37	X	101382231	101382231	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57087711	57087711	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72233486	72233486	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VLDLR	7436	broad.mit.edu	37	9	2646492	2646492	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XRCC5	7520	broad.mit.edu	37	2	217005911	217005911	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF117	51351	broad.mit.edu	37	7	64439363	64439363	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49670844	49670844	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58120095	58120095	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4916-01	TCGA-CJ-4916-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
