Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AASDH	132949	broad.mit.edu	37	4	57215942	57215942	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48682951	48682951	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20739468	20739468	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94943864	94943864	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106368500	106368500	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AIFM3	150209	broad.mit.edu	37	22	21331018	21331018	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106987378	106987378	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58257978	58257978	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37478443	37478443	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD58	347454	broad.mit.edu	37	X	118893385	118893385	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APLP2	334	broad.mit.edu	37	11	129999984	129999984	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21225676	21225676	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APPL2	55198	broad.mit.edu	37	12	105589090	105589090	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	76870367	76870367	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
B3GALT4	8705	broad.mit.edu	37	6	33246066	33246066	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BNC1	646	broad.mit.edu	37	15	83932380	83932380	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79948521	79948521	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111413453	111413453	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105924006	105924007	+	Frame_Shift_Ins	INS	-	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C17orf75	64149	broad.mit.edu	37	17	30660470	30660470	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C6orf186	728464	broad.mit.edu	37	6	110620348	110620348	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CABLES2	81928	broad.mit.edu	37	20	60971621	60971621	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHAF1B	8208	broad.mit.edu	37	21	37785583	37785583	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155238498	155238498	+	Splice_Site	DEL	C	-	-	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COX6B2	125965	broad.mit.edu	37	19	55865784	55865784	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSAG1	158511	broad.mit.edu	37	X	151909172	151909172	+	Silent	SNP	C	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP27C1	339761	broad.mit.edu	37	2	127961091	127961091	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47399695	47399695	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJB11	51726	broad.mit.edu	37	3	186299285	186299285	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJC15	29103	broad.mit.edu	37	13	43652822	43652822	+	Silent	SNP	A	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169494626	169494626	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EME2	197342	broad.mit.edu	37	16	1825398	1825398	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ENPP7	339221	broad.mit.edu	37	17	77707422	77707422	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EP300	2033	broad.mit.edu	37	22	41574358	41574358	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM116A	201627	broad.mit.edu	37	3	57678668	57678668	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96320221	96320221	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	108518168	108518168	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187535488	187535488	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
G3BP1	10146	broad.mit.edu	37	5	151166245	151166245	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAS2	2620	broad.mit.edu	37	11	22707336	22707336	+	Splice_Site	SNP	G	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183942768	183942768	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65474914	65474914	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95027315	95027315	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27704017	27704017	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76715159	76715159	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITM2B	9445	broad.mit.edu	37	13	48830433	48830438	+	In_Frame_Del	DEL	GAAGAA	-	-	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	GAAGAA	GAAGAA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JAK1	3716	broad.mit.edu	37	1	65344794	65344794	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0174	9798	broad.mit.edu	37	16	71961673	71961673	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28045366	28045366	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152732829	152732829	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LIMD1	8994	broad.mit.edu	37	3	45637344	45637344	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMAN1L	79748	broad.mit.edu	37	15	75108801	75108801	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRCH2	57631	broad.mit.edu	37	X	114384431	114384431	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57590881	57590881	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49642940	49642940	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAPT	4137	broad.mit.edu	37	17	44061288	44061288	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60129921	60129921	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MKKS	8195	broad.mit.edu	37	20	10393730	10393730	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171605694	171605694	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NBR1	4077	broad.mit.edu	37	17	41341626	41341626	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCOA4	8031	broad.mit.edu	37	10	51584968	51584968	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33329729	33329729	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89223701	89223701	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ORMDL3	94103	broad.mit.edu	37	17	38079479	38079479	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PAN3	255967	broad.mit.edu	37	13	28750663	28750663	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHGB7	56099	broad.mit.edu	37	5	140798209	140798209	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71444679	71444679	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIAS1	8554	broad.mit.edu	37	15	68457098	68457098	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95791726	95791726	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153697209	153697209	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLM	27434	broad.mit.edu	37	7	44113448	44113448	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204380282	204380282	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57185282	57185282	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRODH2	58510	broad.mit.edu	37	19	36303397	36303397	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTPN18	26469	broad.mit.edu	37	2	131129929	131129934	+	In_Frame_Del	DEL	GACGGG	-	-	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	GACGGG	GACGGG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAB36	9609	broad.mit.edu	37	22	23501360	23501360	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RALY	22913	broad.mit.edu	37	20	32663747	32663747	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM34	23029	broad.mit.edu	37	1	235318310	235318311	+	Frame_Shift_Del	DEL	TG	-	-	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	TG	TG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RFX1	5989	broad.mit.edu	37	19	14083791	14083791	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444821	150444821	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87445570	87445570	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38647616	38647616	+	Silent	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13830874	13830874	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEZ6	124925	broad.mit.edu	37	17	27287870	27287870	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3673709	3673709	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC25A28	81894	broad.mit.edu	37	10	101373512	101373512	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44507853	44507853	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74477471	74477471	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16260312	16260312	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPINK8	646424	broad.mit.edu	37	3	48362546	48362546	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123184076	123184076	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STIL	6491	broad.mit.edu	37	1	47761474	47761474	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STS	412	broad.mit.edu	37	X	7171308	7171308	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SUZ12	23512	broad.mit.edu	37	17	30310113	30310113	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64532268	64532269	+	Missense_Mutation	DNP	CG	TC	TC	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	CG	CG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAP2	6891	broad.mit.edu	37	6	32800178	32800178	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234536934	234536934	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TEX13A	56157	broad.mit.edu	37	X	104464107	104464107	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15433778	15433778	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68780433	68780433	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170945979	170945979	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRAFD1	10906	broad.mit.edu	37	12	112572550	112572550	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2134519	2134519	+	Silent	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179434729	179434729	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUT1	64852	broad.mit.edu	37	11	62348882	62348882	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188305	10188306	+	Frame_Shift_Ins	INS	-	AT	AT	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VTN	7448	broad.mit.edu	37	17	26696549	26696549	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR5B	54554	broad.mit.edu	37	3	122133533	122133533	+	Silent	SNP	A	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37379472	37379472	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZAP70	7535	broad.mit.edu	37	2	98351754	98351754	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147114035	147114035	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF556	80032	broad.mit.edu	37	19	2877284	2877284	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3945851	3945851	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-CZ-4859-01	TCGA-CZ-4859-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
