Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCB1	5243	hgsc.bcm.edu	37	7	87196210	87196210	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AKAP9	10142	hgsc.bcm.edu	37	7	91631974	91631974	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AKAP9	10142	hgsc.bcm.edu	37	7	91714176	91714176	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
APC	324	hgsc.bcm.edu	37	5	112170682	112170682	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ARHGEF17	9828	hgsc.bcm.edu	37	11	73066671	73066671	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATP9A	10079	hgsc.bcm.edu	37	20	50292728	50292728	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BAP1	8314	hgsc.bcm.edu	37	3	52441418	52441418	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BAP1	8314	hgsc.bcm.edu	37	3	52443568	52443568	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C19orf38	255809	hgsc.bcm.edu	37	19	10979899	10979899	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
C4orf17	84103	hgsc.bcm.edu	37	4	100443802	100443802	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CBL	867	hgsc.bcm.edu	37	11	119144732	119144732	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCDC132	55610	hgsc.bcm.edu	37	7	92970752	92970752	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDH3	1001	hgsc.bcm.edu	37	16	68712798	68712798	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CENPC1	1060	hgsc.bcm.edu	37	4	68385065	68385065	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CNOT1	23019	hgsc.bcm.edu	37	16	58614662	58614662	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
COL24A1	255631	hgsc.bcm.edu	37	1	86252141	86252141	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CPZ	8532	hgsc.bcm.edu	37	4	8613867	8613867	+	Silent	SNP	G	G	A	rs2302573	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CTNNA2	1496	hgsc.bcm.edu	37	2	80136761	80136761	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DGKK	139189	hgsc.bcm.edu	37	X	50131599	50131599	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EGFLAM	133584	hgsc.bcm.edu	37	5	38427225	38427225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EME1	146956	hgsc.bcm.edu	37	17	48456585	48456585	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EPHA1	2041	hgsc.bcm.edu	37	7	143097036	143097036	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ERCC4	2072	hgsc.bcm.edu	37	16	14041845	14041845	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBRS	64319	hgsc.bcm.edu	37	16	30679940	30679940	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GATA4	2626	hgsc.bcm.edu	37	8	11615820	11615820	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GIGYF1	64599	hgsc.bcm.edu	37	7	100281055	100281055	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GOT1	2805	hgsc.bcm.edu	37	10	101165548	101165549	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	GA	GA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIAA1109	84162	hgsc.bcm.edu	37	4	123267860	123267860	+	Silent	SNP	T	T	C	rs77615003	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIF3B	9371	hgsc.bcm.edu	37	20	30915461	30915461	+	Silent	SNP	T	T	C	rs1129012	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIF4B	285643	hgsc.bcm.edu	37	5	154394320	154394320	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LAIR2	3904	hgsc.bcm.edu	37	19	55019389	55019389	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LEF1	51176	hgsc.bcm.edu	37	4	109084820	109084820	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LILRB3	11025	hgsc.bcm.edu	37	19	54721109	54721109	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LRRIQ3	127255	hgsc.bcm.edu	37	1	74540469	74540469	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LY6G6F	259215	hgsc.bcm.edu	37	6	31675443	31675444	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MGAT4C	25834	hgsc.bcm.edu	37	12	86383258	86383258	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MTOR	2475	hgsc.bcm.edu	37	1	11189845	11189845	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NRG2	9542	hgsc.bcm.edu	37	5	139245143	139245143	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR2L2	26246	hgsc.bcm.edu	37	1	248202228	248202228	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR52J3	119679	hgsc.bcm.edu	37	11	5068157	5068157	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR8B3	390271	hgsc.bcm.edu	37	11	124266328	124266328	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR8G2	26492	hgsc.bcm.edu	37	11	124096257	124096257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OSBPL6	114880	hgsc.bcm.edu	37	2	179196308	179196308	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCDHB7	56129	hgsc.bcm.edu	37	5	140553319	140553319	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDGFRA	5156	hgsc.bcm.edu	37	4	55131162	55131162	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PENK	5179	hgsc.bcm.edu	37	8	57354188	57354188	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PHACTR3	116154	hgsc.bcm.edu	37	20	58318178	58318178	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PIK3R6	146850	hgsc.bcm.edu	37	17	8733072	8733072	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PNPLA8	50640	hgsc.bcm.edu	37	7	108155935	108155935	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTEN	5728	hgsc.bcm.edu	37	10	89720701	89720701	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTPN13	5783	hgsc.bcm.edu	37	4	87662898	87662898	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTPRA	5786	hgsc.bcm.edu	37	20	2969024	2969024	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RNF115	27246	hgsc.bcm.edu	37	1	145682046	145682046	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RPE65	6121	hgsc.bcm.edu	37	1	68903915	68903915	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SEMA6D	80031	hgsc.bcm.edu	37	15	48058183	48058183	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SETD4	54093	hgsc.bcm.edu	37	21	37418187	37418187	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC39A13	91252	hgsc.bcm.edu	37	11	47433931	47433931	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLCO4C1	353189	hgsc.bcm.edu	37	5	101597678	101597678	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLIT3	6586	hgsc.bcm.edu	37	5	168096839	168096839	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SMCR8	140775	hgsc.bcm.edu	37	17	18219207	18219207	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SNX32	254122	hgsc.bcm.edu	37	11	65617711	65617711	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SYNJ2	8871	hgsc.bcm.edu	37	6	158517224	158517224	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TDRD6	221400	hgsc.bcm.edu	37	6	46661744	46661744	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TGM5	9333	hgsc.bcm.edu	37	15	43531237	43531237	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TMEM63B	55362	hgsc.bcm.edu	37	6	44107238	44107238	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TNS3	64759	hgsc.bcm.edu	37	7	47384598	47384598	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TTC35	9694	hgsc.bcm.edu	37	8	109482105	109482105	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TXNIP	10628	hgsc.bcm.edu	37	1	145440274	145440274	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
UBR3	130507	hgsc.bcm.edu	37	2	170751729	170751729	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
WDFY3	23001	hgsc.bcm.edu	37	4	85722980	85722980	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
XRCC2	7516	hgsc.bcm.edu	37	7	152346297	152346297	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF284	342909	hgsc.bcm.edu	37	19	44586259	44586259	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF468	90333	hgsc.bcm.edu	37	19	53345371	53345371	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF607	84775	hgsc.bcm.edu	37	19	38190296	38190296	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF800	168850	hgsc.bcm.edu	37	7	127013601	127013601	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-4866-01A-01D-1501-10	TCGA-CZ-4866-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
